RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 KCNH8Q96L42 1107 aa2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 FAM117AQ9C073 453 aa2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 ALG2Q9H553 416 aa2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 TRIM52Q96A61 297 aa2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 TRIM6-TRIM34B2RNG4 842 aa2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 LORP23490 312 aaPredicted RBP2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 GNEQ9Y223 722 aaKnown RBP2.41□□□□□ -2.02
CTDSPL2-202ENST00000558373 GFRA3O60609 400 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 PRR20EP86478 221 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 PRR20CP86479 221 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 PRR20DP86480 221 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 PRR20BP86481 221 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 PRR20AP86496 221 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 MYT1Q01538 1121 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 SH3D19Q5HYK7 790 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 SH3RF1Q7Z6J0 888 aa2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 SPENQ96T58 3664 aaKnown RBP2.4□□□□□ -2.02
CTDSPL2-202ENST00000558373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 VAMP1P23763 118 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 RBM26Q5T8P6 1007 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 RBM46Q8TBY0 533 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 ZNF592Q92610 1267 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 KIAA1468Q9P260 1216 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 TSR3Q9UJK0 312 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 HUWE1Q7Z6Z7 4374 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 GRXCR2A6NFK2 248 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 CD46P15529 392 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 SKIV2LQ15477 1246 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 MTMR14Q8NCE2 650 aa2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 DYNC2H1Q8NCM8 4307 aaKnown RBP2.4□□□□□ -2.03
CTDSPL2-202ENST00000558373 ATP1B4Q9UN42 357 aaPredicted RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 TREML4Q6UXN2 200 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 SULF1Q8IWU6 871 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 CRIPAKQ8N1N5 446 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 NBPF3Q9H094 633 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 GPCPD1Q9NPB8 672 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 TSKSQ9UJT2 592 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 SERPINA10Q9UK55 444 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 ACIN1Q9UKV3 1341 aaKnown RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 HDGFP51858 240 aaKnown RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 TTLL12Q14166 644 aaPredicted RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 FAM98CQ17RN3 349 aaKnown RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 KANK4Q5T7N3 995 aaPredicted RBP2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 PPP1R18Q6NYC8 613 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 IL27Q8NEV9 243 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 PCDHGC3Q9UN70 934 aa2.39□□□□□ -2.03
CTDSPL2-202ENST00000558373 ZBTB7CA1YPR0 619 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 KDF1Q8NAX2 398 aaPredicted RBP2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 ANKK1Q8NFD2 765 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 WIPF1O43516 503 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 GRIPAP1Q4V328 841 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 KCTD17Q8N5Z5 321 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 CCDC102AQ96A19 550 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 KLF16Q9BXK1 252 aaPredicted RBP2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 CDHR5Q9HBB8 845 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 UBTFP17480 764 aaKnown RBP2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 EPHA4P54764 986 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 C6orf132Q5T0Z8 1188 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 CACNA2D2Q9NY47 1150 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 CADPSQ9ULU8 1353 aa2.38□□□□□ -2.03
CTDSPL2-202ENST00000558373 MCCD1P59942 119 aaPredicted RBP2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 USP46P62068 366 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 ZNF787Q6DD87 383 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 PACS2Q86VP3 889 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 SPDYE5A6NIY4 337 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 UNCXA6NJT0 531 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 CCDC97Q96F63 343 aaPredicted RBP2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 GDF9O60383 454 aa2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 PPP1R15AO75807 674 aaPredicted RBP2.37□□□□□ -2.03
CTDSPL2-202ENST00000558373 ZFHX4Q86UP3 3567 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 NBPF26B4DH59 902 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 PDIA4P13667 645 aaKnown RBP2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 MAP3K7O43318 606 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 DGAT1O75907 488 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 MAP3K10Q02779 954 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 NUTM1Q86Y26 1132 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 PRKD2Q9BZL6 878 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 RELNP78509 3460 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 SPTLC1O15269 473 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 AVPP01185 164 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 NFX1Q12986 1120 aaKnown RBP2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 MTRQ99707 1265 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 PRR14Q9BWN1 585 aa2.36□□□□□ -2.03
CTDSPL2-202ENST00000558373 SSTR3P32745 418 aaPredicted RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 SOX11P35716 441 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 WASHC4Q2M389 1173 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 B4GALNT3Q6L9W6 998 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 STAC3Q96MF2 364 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 PKHD1P08F94 4074 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 UBAP2LQ14157 1087 aaKnown RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 PRPF38BQ5VTL8 546 aaKnown RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 IL21Q9HBE4 155 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 ZNF330Q9Y3S2 320 aaPredicted RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 THBS1P07996 1170 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 APLP1P51693 650 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 GIGYF2Q6Y7W6 1299 aaKnown RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 FBXO33Q7Z6M2 555 aa2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 METTL3Q86U44 580 aaKnown RBP2.35□□□□□ -2.03
CTDSPL2-202ENST00000558373 UPF1Q92900 1129 aaKnown RBP eCLIP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms