RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 QRICH2Q9H0J4 1663 aa14.79□□□□□ -0.04
LRRC28-204ENST00000558172 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
LRRC28-204ENST00000558172 CENPJQ9HC77 1338 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-204ENST00000558172 PLEKHH1Q9ULM0 1364 aa14.78□□□□□ -0.04
LRRC28-204ENST00000558172 DCCP43146 1447 aa14.77□□□□□ -0.04
LRRC28-204ENST00000558172 SLC24A1O60721 1099 aa14.77□□□□□ -0.05
LRRC28-204ENST00000558172 USP47Q96K76 1375 aa14.76□□□□□ -0.05
LRRC28-204ENST00000558172 ATF3P18847 181 aa14.76□□□□□ -0.05
LRRC28-204ENST00000558172 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
LRRC28-204ENST00000558172 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
LRRC28-204ENST00000558172 ADGRB2O60241 1585 aa14.76□□□□□ -0.05
LRRC28-204ENST00000558172 EIF4G2P78344 907 aaKnown RBP eCLIP14.75□□□□□ -0.05
LRRC28-204ENST00000558172 CDC42BPGQ6DT37 1551 aa14.75□□□□□ -0.05
LRRC28-204ENST00000558172 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
LRRC28-204ENST00000558172 TOM1O60784 492 aa14.74□□□□□ -0.05
LRRC28-204ENST00000558172 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
LRRC28-204ENST00000558172 FMN2Q9NZ56 1722 aa14.73□□□□□ -0.05
LRRC28-204ENST00000558172 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
LRRC28-204ENST00000558172 WASLO00401 505 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-204ENST00000558172 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
LRRC28-204ENST00000558172 UBAP1LF5GYI3 381 aa14.7□□□□□ -0.06
LRRC28-204ENST00000558172 HIRIP3Q9BW71 556 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-204ENST00000558172 RGPD8O14715 1765 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-204ENST00000558172 CDK19Q9BWU1 502 aa14.69□□□□□ -0.06
LRRC28-204ENST00000558172 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
LRRC28-204ENST00000558172 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
LRRC28-204ENST00000558172 TESK2Q96S53 571 aa14.68□□□□□ -0.06
LRRC28-204ENST00000558172 MST1RQ04912 1400 aa14.67□□□□□ -0.06
LRRC28-204ENST00000558172 ANKARQ7Z5J8 1434 aa14.67□□□□□ -0.06
LRRC28-204ENST00000558172 ITSN1Q15811 1721 aa14.67□□□□□ -0.06
LRRC28-204ENST00000558172 TMF1P82094 1093 aa14.67□□□□□ -0.06
LRRC28-204ENST00000558172 PUS7Q96PZ0 661 aaKnown RBP14.67□□□□□ -0.06
LRRC28-204ENST00000558172 TULP4Q9NRJ4 1543 aa14.66□□□□□ -0.06
LRRC28-204ENST00000558172 SRPK2P78362 688 aaKnown RBP14.66□□□□□ -0.06
LRRC28-204ENST00000558172 C1orf167Q5SNV9 1468 aa14.65□□□□□ -0.06
LRRC28-204ENST00000558172 CDCA8Q53HL2 280 aa14.65□□□□□ -0.06
LRRC28-204ENST00000558172 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
LRRC28-204ENST00000558172 NUDT16Q96DE0 195 aaKnown RBP14.64□□□□□ -0.07
LRRC28-204ENST00000558172 KIF1AQ12756 1690 aa14.63□□□□□ -0.07
LRRC28-204ENST00000558172 ROBO1Q9Y6N7 1651 aa14.63□□□□□ -0.07
LRRC28-204ENST00000558172 NUTM2FA1L443 756 aa14.63□□□□□ -0.07
LRRC28-204ENST00000558172 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
LRRC28-204ENST00000558172 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
LRRC28-204ENST00000558172 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
LRRC28-204ENST00000558172 ESCO1Q5FWF5 840 aa14.62□□□□□ -0.07
LRRC28-204ENST00000558172 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
LRRC28-204ENST00000558172 ATP7BP35670 1465 aa14.62□□□□□ -0.07
LRRC28-204ENST00000558172 TOPAZ1Q8N9V7 1692 aa14.61□□□□□ -0.07
LRRC28-204ENST00000558172 ATAD2Q6PL18 1390 aa14.61□□□□□ -0.07
LRRC28-204ENST00000558172 ORAI2Q96SN7 254 aa14.61□□□□□ -0.07
LRRC28-204ENST00000558172 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
LRRC28-204ENST00000558172 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
LRRC28-204ENST00000558172 BRINP3Q76B58 766 aa14.6□□□□□ -0.07
LRRC28-204ENST00000558172 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
LRRC28-204ENST00000558172 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
LRRC28-204ENST00000558172 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
LRRC28-204ENST00000558172 NHSL1Q5SYE7 1610 aa14.58□□□□□ -0.08
LRRC28-204ENST00000558172 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
LRRC28-204ENST00000558172 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
LRRC28-204ENST00000558172 AHDC1Q5TGY3 1603 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-204ENST00000558172 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
LRRC28-204ENST00000558172 PMFBP1Q8TBY8 1022 aa14.56□□□□□ -0.08
LRRC28-204ENST00000558172 CABP1Q9NZU7 370 aa14.56□□□□□ -0.08
LRRC28-204ENST00000558172 NPHP3Q7Z494 1330 aa14.56□□□□□ -0.08
LRRC28-204ENST00000558172 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
LRRC28-204ENST00000558172 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
LRRC28-204ENST00000558172 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
LRRC28-204ENST00000558172 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
LRRC28-204ENST00000558172 FOXO3O43524 673 aa14.54□□□□□ -0.08
LRRC28-204ENST00000558172 PSME1Q06323 249 aa14.54□□□□□ -0.08
LRRC28-204ENST00000558172 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
LRRC28-204ENST00000558172 ACEP12821 1306 aa14.53□□□□□ -0.08
LRRC28-204ENST00000558172 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
LRRC28-204ENST00000558172 BRD4O60885 1362 aaPredicted RBP14.52□□□□□ -0.08
LRRC28-204ENST00000558172 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
LRRC28-204ENST00000558172 TERF2IPQ9NYB0 399 aa14.52□□□□□ -0.09
LRRC28-204ENST00000558172 MYOM1P52179 1685 aa14.52□□□□□ -0.09
LRRC28-204ENST00000558172 SOS2Q07890 1332 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-204ENST00000558172 KRT28Q7Z3Y7 464 aa14.51□□□□□ -0.09
LRRC28-204ENST00000558172 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-204ENST00000558172 POLR3GLQ9BT43 218 aa14.51□□□□□ -0.09
LRRC28-204ENST00000558172 MON2Q7Z3U7 1717 aa14.5□□□□□ -0.09
LRRC28-204ENST00000558172 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
LRRC28-204ENST00000558172 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
LRRC28-204ENST00000558172 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
LRRC28-204ENST00000558172 PXDNQ92626 1479 aa14.5□□□□□ -0.09
LRRC28-204ENST00000558172 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
LRRC28-204ENST00000558172 CCDC7Q96M83 1385 aa14.49□□□□□ -0.09
LRRC28-204ENST00000558172 DDX17Q92841 729 aaKnown RBP14.49□□□□□ -0.09
LRRC28-204ENST00000558172 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
LRRC28-204ENST00000558172 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
LRRC28-204ENST00000558172 KTN1Q86UP2 1357 aaKnown RBP14.48□□□□□ -0.09
LRRC28-204ENST00000558172 ANKRD36BQ8N2N9 1353 aa14.48□□□□□ -0.09
LRRC28-204ENST00000558172 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
LRRC28-204ENST00000558172 HSPA1LP34931 641 aa14.48□□□□□ -0.09
LRRC28-204ENST00000558172 CD163L1Q9NR16 1453 aa14.48□□□□□ -0.09
LRRC28-204ENST00000558172 USP6P35125 1406 aa14.47□□□□□ -0.09
LRRC28-204ENST00000558172 XPCQ01831 940 aaPredicted RBP14.46□□□□□ -0.09
LRRC28-204ENST00000558172 A0A1W2PP64 1363 aa14.46□□□□□ -0.1
LRRC28-204ENST00000558172 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms