RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 KTN1Q86UP2 1357 aaKnown RBP27.86■■■□□ 2.05
SNRPA1-205ENST00000558036 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 MRS2Q9HD23 443 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 ROBO2Q9HCK4 1378 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 TECPR2O15040 1411 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 TBX22Q9Y458 520 aa27.85■■■□□ 2.05
SNRPA1-205ENST00000558036 CARD14Q9BXL6 1004 aa27.83■■■□□ 2.05
SNRPA1-205ENST00000558036 CDK19Q9BWU1 502 aa27.82■■■□□ 2.04
SNRPA1-205ENST00000558036 RALBP1Q15311 655 aa27.82■■■□□ 2.04
SNRPA1-205ENST00000558036 CPS1P31327 1500 aa27.81■■■□□ 2.04
SNRPA1-205ENST00000558036 PARD3Q8TEW0 1356 aa27.81■■■□□ 2.04
SNRPA1-205ENST00000558036 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
SNRPA1-205ENST00000558036 AMER1Q5JTC6 1135 aaPredicted RBP27.8■■■□□ 2.04
SNRPA1-205ENST00000558036 AMOTL2Q9Y2J4 779 aa27.8■■■□□ 2.04
SNRPA1-205ENST00000558036 FAM135BQ49AJ0 1406 aa27.8■■■□□ 2.04
SNRPA1-205ENST00000558036 PUS7Q96PZ0 661 aaKnown RBP27.8■■■□□ 2.04
SNRPA1-205ENST00000558036 CENPBP07199 599 aaPredicted RBP27.79■■■□□ 2.04
SNRPA1-205ENST00000558036 KDM4FA0A1W2PPD8 638 aa27.79■■■□□ 2.04
SNRPA1-205ENST00000558036 SIRT1Q96EB6 747 aa27.78■■■□□ 2.04
SNRPA1-205ENST00000558036 MYBBP1AQ9BQG0 1328 aaKnown RBP27.77■■■□□ 2.04
SNRPA1-205ENST00000558036 DIP2AQ14689 1571 aa27.75■■■□□ 2.03
SNRPA1-205ENST00000558036 FAM9BQ8IZU0 186 aa27.74■■■□□ 2.03
SNRPA1-205ENST00000558036 ATAD2Q6PL18 1390 aa27.73■■■□□ 2.03
SNRPA1-205ENST00000558036 NSD3Q9BZ95 1437 aa27.73■■■□□ 2.03
SNRPA1-205ENST00000558036 WASLO00401 505 aaPredicted RBP27.73■■■□□ 2.03
SNRPA1-205ENST00000558036 NCKAP5LQ9HCH0 1330 aa27.72■■■□□ 2.03
SNRPA1-205ENST00000558036 KCNA6P17658 529 aa27.7■■■□□ 2.02
SNRPA1-205ENST00000558036 ANKRD36BQ8N2N9 1353 aa27.7■■■□□ 2.02
SNRPA1-205ENST00000558036 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
SNRPA1-205ENST00000558036 A0A1W2PP64 1363 aa27.68■■■□□ 2.02
SNRPA1-205ENST00000558036 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
SNRPA1-205ENST00000558036 NLRP13Q86W25 1043 aa27.67■■■□□ 2.02
SNRPA1-205ENST00000558036 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.67■■■□□ 2.02
SNRPA1-205ENST00000558036 PTCH1Q13635 1447 aa27.66■■■□□ 2.02
SNRPA1-205ENST00000558036 NINLQ9Y2I6 1382 aa27.66■■■□□ 2.02
SNRPA1-205ENST00000558036 NPC1L1Q9UHC9 1359 aa27.66■■■□□ 2.02
SNRPA1-205ENST00000558036 XRN1Q8IZH2 1706 aaKnown RBP27.65■■■□□ 2.02
SNRPA1-205ENST00000558036 BRD4O60885 1362 aaPredicted RBP27.65■■■□□ 2.02
SNRPA1-205ENST00000558036 PIK3R4Q99570 1358 aa27.64■■■□□ 2.02
SNRPA1-205ENST00000558036 CD163L1Q9NR16 1453 aa27.64■■■□□ 2.02
SNRPA1-205ENST00000558036 HSPA2P54652 639 aa27.64■■■□□ 2.01
SNRPA1-205ENST00000558036 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
SNRPA1-205ENST00000558036 NUDT16Q96DE0 195 aaKnown RBP27.62■■■□□ 2.01
SNRPA1-205ENST00000558036 TERF2IPQ9NYB0 399 aa27.62■■■□□ 2.01
SNRPA1-205ENST00000558036 PPP2R1AP30153 589 aa27.61■■■□□ 2.01
SNRPA1-205ENST00000558036 PRR36Q9H6K5 1346 aa27.6■■■□□ 2.01
SNRPA1-205ENST00000558036 PNISRQ8TF01 805 aaKnown RBP27.6■■■□□ 2.01
SNRPA1-205ENST00000558036 HNRNPUQ00839 825 aaKnown RBP eCLIP27.59■■■□□ 2.01
SNRPA1-205ENST00000558036 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
SNRPA1-205ENST00000558036 CGNL1Q0VF96 1302 aa27.59■■■□□ 2.01
SNRPA1-205ENST00000558036 PPIP5K1Q6PFW1 1433 aa27.59■■■□□ 2.01
SNRPA1-205ENST00000558036 ADGRB2O60241 1585 aa27.58■■■□□ 2.01
SNRPA1-205ENST00000558036 HDGFL2Q7Z4V5 671 aaPredicted RBP27.57■■■□□ 2
SNRPA1-205ENST00000558036 CCDC61Q9Y6R9 512 aa27.56■■■□□ 2
SNRPA1-205ENST00000558036 ATP7BP35670 1465 aa27.56■■■□□ 2
SNRPA1-205ENST00000558036 TNNT2P45379 298 aaPredicted RBP27.55■■■□□ 2
SNRPA1-205ENST00000558036 CHD2O14647 1828 aaKnown RBP27.54■■■□□ 2
SNRPA1-205ENST00000558036 MORC1Q86VD1 984 aa27.54■■■□□ 2
SNRPA1-205ENST00000558036 USP32Q8NFA0 1604 aa27.53■■■□□ 2
SNRPA1-205ENST00000558036 GGNBP2Q9H3C7 697 aa27.5■■□□□ 1.99
SNRPA1-205ENST00000558036 LMTK3Q96Q04 1460 aa27.49■■□□□ 1.99
SNRPA1-205ENST00000558036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.49■■□□□ 1.99
SNRPA1-205ENST00000558036 SENP3-EIF4A1A0A087X0R7 540 aa27.49■■□□□ 1.99
SNRPA1-205ENST00000558036 CPSF1Q10570 1443 aaKnown RBP27.48■■□□□ 1.99
SNRPA1-205ENST00000558036 FYB1O15117 783 aa27.47■■□□□ 1.99
SNRPA1-205ENST00000558036 NSD2O96028 1365 aa27.46■■□□□ 1.99
SNRPA1-205ENST00000558036 CDC42BPGQ6DT37 1551 aa27.45■■□□□ 1.98
SNRPA1-205ENST00000558036 NKTRP30414 1462 aaKnown RBP27.43■■□□□ 1.98
SNRPA1-205ENST00000558036 ACEP12821 1306 aa27.42■■□□□ 1.98
SNRPA1-205ENST00000558036 PMFBP1Q8TBY8 1022 aa27.41■■□□□ 1.98
SNRPA1-205ENST00000558036 NALCNQ8IZF0 1738 aa27.41■■□□□ 1.98
SNRPA1-205ENST00000558036 TOPAZ1Q8N9V7 1692 aa27.41■■□□□ 1.98
SNRPA1-205ENST00000558036 C14orf37Q86TY3 774 aa27.4■■□□□ 1.98
SNRPA1-205ENST00000558036 EDC4Q6P2E9 1401 aaKnown RBP27.4■■□□□ 1.98
SNRPA1-205ENST00000558036 PLEKHG3A1L390 1219 aa27.39■■□□□ 1.98
SNRPA1-205ENST00000558036 NWD1Q149M9 1564 aa27.38■■□□□ 1.97
SNRPA1-205ENST00000558036 NME9Q86XW9 330 aa27.38■■□□□ 1.97
SNRPA1-205ENST00000558036 PROSER2Q86WR7 435 aaPredicted RBP27.37■■□□□ 1.97
SNRPA1-205ENST00000558036 ADGRL3Q9HAR2 1447 aa27.36■■□□□ 1.97
SNRPA1-205ENST00000558036 MTHFSP49914 203 aa27.36■■□□□ 1.97
SNRPA1-205ENST00000558036 ZNF692Q9BU19 519 aaPredicted RBP27.36■■□□□ 1.97
SNRPA1-205ENST00000558036 ZRANB1Q9UGI0 708 aa27.36■■□□□ 1.97
SNRPA1-205ENST00000558036 ADAMTS8Q9UP79 889 aa27.36■■□□□ 1.97
SNRPA1-205ENST00000558036 RGPD8O14715 1765 aaPredicted RBP27.35■■□□□ 1.97
SNRPA1-205ENST00000558036 ITSN1Q15811 1721 aa27.34■■□□□ 1.97
SNRPA1-205ENST00000558036 MON2Q7Z3U7 1717 aa27.34■■□□□ 1.97
SNRPA1-205ENST00000558036 AKAP12Q02952 1782 aa27.33■■□□□ 1.97
SNRPA1-205ENST00000558036 FMN2Q9NZ56 1722 aa27.33■■□□□ 1.97
SNRPA1-205ENST00000558036 KIF20BQ96Q89 1820 aa27.33■■□□□ 1.97
SNRPA1-205ENST00000558036 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
SNRPA1-205ENST00000558036 ZBED9Q6R2W3 1325 aa27.33■■□□□ 1.97
SNRPA1-205ENST00000558036 ANKARQ7Z5J8 1434 aa27.32■■□□□ 1.96
SNRPA1-205ENST00000558036 FBLN1P23142 703 aa27.32■■□□□ 1.96
SNRPA1-205ENST00000558036 NGDNQ8NEJ9 315 aaKnown RBP27.32■■□□□ 1.96
SNRPA1-205ENST00000558036 USP6P35125 1406 aa27.31■■□□□ 1.96
SNRPA1-205ENST00000558036 STRCQ7RTU9 1775 aa27.3■■□□□ 1.96
SNRPA1-205ENST00000558036 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
SNRPA1-205ENST00000558036 ANKRD26Q9UPS8 1709 aa27.3■■□□□ 1.96
SNRPA1-205ENST00000558036 TTC21BQ7Z4L5 1316 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms