RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 KNDC1Q76NI1 1749 aa29.52■■■□□ 2.32
TMEM250-204ENST00000557985 LMTK3Q96Q04 1460 aa29.5■■■□□ 2.31
TMEM250-204ENST00000557985 TULP4Q9NRJ4 1543 aa29.5■■■□□ 2.31
TMEM250-204ENST00000557985 SRPK2P78362 688 aaKnown RBP29.5■■■□□ 2.31
TMEM250-204ENST00000557985 FAM135BQ49AJ0 1406 aa29.49■■■□□ 2.31
TMEM250-204ENST00000557985 KCNA6P17658 529 aa29.49■■■□□ 2.31
TMEM250-204ENST00000557985 CPS1P31327 1500 aa29.49■■■□□ 2.31
TMEM250-204ENST00000557985 CDK19Q9BWU1 502 aa29.48■■■□□ 2.31
TMEM250-204ENST00000557985 TMC1Q8TDI8 760 aa29.48■■■□□ 2.31
TMEM250-204ENST00000557985 CENPBP07199 599 aaPredicted RBP29.46■■■□□ 2.31
TMEM250-204ENST00000557985 PIK3R4Q99570 1358 aa29.45■■■□□ 2.31
TMEM250-204ENST00000557985 SLC12A5Q9H2X9 1139 aa29.45■■■□□ 2.31
TMEM250-204ENST00000557985 CHD2O14647 1828 aaKnown RBP29.43■■■□□ 2.3
TMEM250-204ENST00000557985 MYOM1P52179 1685 aa29.43■■■□□ 2.3
TMEM250-204ENST00000557985 PER1O15534 1290 aaPredicted RBP29.43■■■□□ 2.3
TMEM250-204ENST00000557985 PUS7Q96PZ0 661 aaKnown RBP29.41■■■□□ 2.3
TMEM250-204ENST00000557985 WASLO00401 505 aaPredicted RBP29.4■■■□□ 2.3
TMEM250-204ENST00000557985 RBM33Q96EV2 1170 aaKnown RBP29.4■■■□□ 2.3
TMEM250-204ENST00000557985 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
TMEM250-204ENST00000557985 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.39■■■□□ 2.3
TMEM250-204ENST00000557985 PRKRIP1Q9H875 184 aaPredicted RBP29.37■■■□□ 2.29
TMEM250-204ENST00000557985 PTCH1Q13635 1447 aa29.37■■■□□ 2.29
TMEM250-204ENST00000557985 SCAF1Q9H7N4 1312 aaKnown RBP29.37■■■□□ 2.29
TMEM250-204ENST00000557985 CARD14Q9BXL6 1004 aa29.34■■■□□ 2.29
TMEM250-204ENST00000557985 STRCQ7RTU9 1775 aa29.34■■■□□ 2.29
TMEM250-204ENST00000557985 KNSTRNQ9Y448 316 aa29.33■■■□□ 2.29
TMEM250-204ENST00000557985 NUTM2FA1L443 756 aa29.32■■■□□ 2.28
TMEM250-204ENST00000557985 CABP1Q9NZU7 370 aa29.32■■■□□ 2.28
TMEM250-204ENST00000557985 CC2D1BQ5T0F9 858 aaKnown RBP29.31■■■□□ 2.28
TMEM250-204ENST00000557985 ATAD2Q6PL18 1390 aa29.31■■■□□ 2.28
TMEM250-204ENST00000557985 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
TMEM250-204ENST00000557985 PROSER2Q86WR7 435 aaPredicted RBP29.26■■■□□ 2.27
TMEM250-204ENST00000557985 PRR36Q9H6K5 1346 aa29.24■■■□□ 2.27
TMEM250-204ENST00000557985 AMER1Q5JTC6 1135 aaPredicted RBP29.23■■■□□ 2.27
TMEM250-204ENST00000557985 CCER2I3L3R5 266 aa29.22■■■□□ 2.27
TMEM250-204ENST00000557985 CCDC61Q9Y6R9 512 aa29.22■■■□□ 2.27
TMEM250-204ENST00000557985 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
TMEM250-204ENST00000557985 KTN1Q86UP2 1357 aaKnown RBP29.22■■■□□ 2.27
TMEM250-204ENST00000557985 C14orf37Q86TY3 774 aa29.22■■■□□ 2.27
TMEM250-204ENST00000557985 ANKRD36BQ8N2N9 1353 aa29.21■■■□□ 2.27
TMEM250-204ENST00000557985 NINLQ9Y2I6 1382 aa29.21■■■□□ 2.27
TMEM250-204ENST00000557985 CCDC184Q52MB2 194 aa29.21■■■□□ 2.27
TMEM250-204ENST00000557985 TERF2IPQ9NYB0 399 aa29.2■■■□□ 2.26
TMEM250-204ENST00000557985 A0A1W2PP64 1363 aa29.19■■■□□ 2.26
TMEM250-204ENST00000557985 PPIP5K1Q6PFW1 1433 aa29.19■■■□□ 2.26
TMEM250-204ENST00000557985 NSD3Q9BZ95 1437 aa29.19■■■□□ 2.26
TMEM250-204ENST00000557985 NWD1Q149M9 1564 aa29.19■■■□□ 2.26
TMEM250-204ENST00000557985 STRCP1A6NGW2 1772 aa29.19■■■□□ 2.26
TMEM250-204ENST00000557985 RALBP1Q15311 655 aa29.18■■■□□ 2.26
TMEM250-204ENST00000557985 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
TMEM250-204ENST00000557985 HDGFL2Q7Z4V5 671 aaPredicted RBP29.17■■■□□ 2.26
TMEM250-204ENST00000557985 ATP7BP35670 1465 aa29.16■■■□□ 2.26
TMEM250-204ENST00000557985 NALCNQ8IZF0 1738 aa29.15■■■□□ 2.26
TMEM250-204ENST00000557985 PELP1Q8IZL8 1130 aaKnown RBP29.14■■■□□ 2.26
TMEM250-204ENST00000557985 YTHDC1Q96MU7 727 aaKnown RBP29.14■■■□□ 2.26
TMEM250-204ENST00000557985 RGPD8O14715 1765 aaPredicted RBP29.14■■■□□ 2.25
TMEM250-204ENST00000557985 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
TMEM250-204ENST00000557985 ZNF335Q9H4Z2 1342 aaPredicted RBP29.12■■■□□ 2.25
TMEM250-204ENST00000557985 PMFBP1Q8TBY8 1022 aa29.11■■■□□ 2.25
TMEM250-204ENST00000557985 ADGRL3Q9HAR2 1447 aa29.11■■■□□ 2.25
TMEM250-204ENST00000557985 USP32Q8NFA0 1604 aa29.1■■■□□ 2.25
TMEM250-204ENST00000557985 NKTRP30414 1462 aaKnown RBP29.1■■■□□ 2.25
TMEM250-204ENST00000557985 MRS2Q9HD23 443 aa29.1■■■□□ 2.25
TMEM250-204ENST00000557985 CGNL1Q0VF96 1302 aa29.09■■■□□ 2.25
TMEM250-204ENST00000557985 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
TMEM250-204ENST00000557985 DMRT2Q9Y5R5 561 aa29.09■■■□□ 2.25
TMEM250-204ENST00000557985 TMEM94Q12767 1356 aa29.09■■■□□ 2.25
TMEM250-204ENST00000557985 NPC1L1Q9UHC9 1359 aa29.08■■■□□ 2.25
TMEM250-204ENST00000557985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.08■■■□□ 2.25
TMEM250-204ENST00000557985 ACEP12821 1306 aa29.07■■■□□ 2.24
TMEM250-204ENST00000557985 PLEKHG3A1L390 1219 aa29.07■■■□□ 2.24
TMEM250-204ENST00000557985 CPSF1Q10570 1443 aaKnown RBP29.06■■■□□ 2.24
TMEM250-204ENST00000557985 FMN2Q9NZ56 1722 aa29.06■■■□□ 2.24
TMEM250-204ENST00000557985 C19orf44Q9H6X5 657 aa29.06■■■□□ 2.24
TMEM250-204ENST00000557985 TOPAZ1Q8N9V7 1692 aa29.04■■■□□ 2.24
TMEM250-204ENST00000557985 CDC42BPGQ6DT37 1551 aa29.04■■■□□ 2.24
TMEM250-204ENST00000557985 TNNT2P45379 298 aaPredicted RBP29.03■■■□□ 2.24
TMEM250-204ENST00000557985 MORC1Q86VD1 984 aa29.03■■■□□ 2.24
TMEM250-204ENST00000557985 ZNF692Q9BU19 519 aaPredicted RBP29.03■■■□□ 2.24
TMEM250-204ENST00000557985 GGNBP2Q9H3C7 697 aa29.03■■■□□ 2.24
TMEM250-204ENST00000557985 FYB1O15117 783 aa29.02■■■□□ 2.24
TMEM250-204ENST00000557985 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
TMEM250-204ENST00000557985 ANKARQ7Z5J8 1434 aa29.01■■■□□ 2.23
TMEM250-204ENST00000557985 PPP2R1AP30153 589 aa29.01■■■□□ 2.23
TMEM250-204ENST00000557985 ESCO1Q5FWF5 840 aa28.99■■■□□ 2.23
TMEM250-204ENST00000557985 NLRP13Q86W25 1043 aa28.99■■■□□ 2.23
TMEM250-204ENST00000557985 ITSN1Q15811 1721 aa28.99■■■□□ 2.23
TMEM250-204ENST00000557985 AKAP12Q02952 1782 aa28.98■■■□□ 2.23
TMEM250-204ENST00000557985 FAM9BQ8IZU0 186 aa28.97■■■□□ 2.23
TMEM250-204ENST00000557985 ATF3P18847 181 aa28.97■■■□□ 2.23
TMEM250-204ENST00000557985 ORAI2Q96SN7 254 aa28.96■■■□□ 2.23
TMEM250-204ENST00000557985 PHF8Q9UPP1 1060 aa28.95■■■□□ 2.23
TMEM250-204ENST00000557985 EDC4Q6P2E9 1401 aaKnown RBP28.95■■■□□ 2.22
TMEM250-204ENST00000557985 NME9Q86XW9 330 aa28.95■■■□□ 2.22
TMEM250-204ENST00000557985 LRRC7Q96NW7 1537 aa28.95■■■□□ 2.22
TMEM250-204ENST00000557985 BRD4O60885 1362 aaPredicted RBP28.94■■■□□ 2.22
TMEM250-204ENST00000557985 XIRP1Q702N8 1843 aaKnown RBP28.94■■■□□ 2.22
TMEM250-204ENST00000557985 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
TMEM250-204ENST00000557985 MON2Q7Z3U7 1717 aa28.94■■■□□ 2.22
TMEM250-204ENST00000557985 NCOA3Q9Y6Q9 1424 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms