RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 HSPA1LP34931 641 aa16.86■□□□□ 0.29
LINC00648-204ENST00000557749 C14orf37Q86TY3 774 aa16.86■□□□□ 0.29
LINC00648-204ENST00000557749 DISP3Q9P2K9 1392 aa16.86■□□□□ 0.29
LINC00648-204ENST00000557749 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
LINC00648-204ENST00000557749 HRCP23327 699 aa16.85■□□□□ 0.29
LINC00648-204ENST00000557749 POTEHQ6S545 545 aa16.85■□□□□ 0.29
LINC00648-204ENST00000557749 NUBP1P53384 320 aa16.84■□□□□ 0.29
LINC00648-204ENST00000557749 CADPS2Q86UW7 1296 aa16.84■□□□□ 0.29
LINC00648-204ENST00000557749 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
LINC00648-204ENST00000557749 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
LINC00648-204ENST00000557749 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
LINC00648-204ENST00000557749 RAB3GAP2Q9H2M9 1393 aa16.83■□□□□ 0.28
LINC00648-204ENST00000557749 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
LINC00648-204ENST00000557749 NRXN3Q9Y4C0 1643 aa16.83■□□□□ 0.28
LINC00648-204ENST00000557749 DCCP43146 1447 aa16.82■□□□□ 0.28
LINC00648-204ENST00000557749 ATF3P18847 181 aa16.82■□□□□ 0.28
LINC00648-204ENST00000557749 XRN1Q8IZH2 1706 aaKnown RBP16.81■□□□□ 0.28
LINC00648-204ENST00000557749 PPLO60437 1756 aa16.79■□□□□ 0.28
LINC00648-204ENST00000557749 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
LINC00648-204ENST00000557749 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
LINC00648-204ENST00000557749 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
LINC00648-204ENST00000557749 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
LINC00648-204ENST00000557749 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
LINC00648-204ENST00000557749 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
LINC00648-204ENST00000557749 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
LINC00648-204ENST00000557749 METP08581 1390 aa16.77■□□□□ 0.27
LINC00648-204ENST00000557749 ROBO1Q9Y6N7 1651 aa16.76■□□□□ 0.27
LINC00648-204ENST00000557749 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
LINC00648-204ENST00000557749 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
LINC00648-204ENST00000557749 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
LINC00648-204ENST00000557749 MED1Q15648 1581 aaPredicted RBP16.73■□□□□ 0.27
LINC00648-204ENST00000557749 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
LINC00648-204ENST00000557749 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
LINC00648-204ENST00000557749 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
LINC00648-204ENST00000557749 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
LINC00648-204ENST00000557749 IFT172Q9UG01 1749 aa16.71■□□□□ 0.27
LINC00648-204ENST00000557749 MYOM2P54296 1465 aa16.7■□□□□ 0.26
LINC00648-204ENST00000557749 LAMC1P11047 1609 aa16.7■□□□□ 0.26
LINC00648-204ENST00000557749 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
LINC00648-204ENST00000557749 PHLPP1O60346 1717 aa16.68■□□□□ 0.26
LINC00648-204ENST00000557749 JCADQ9P266 1359 aa16.68■□□□□ 0.26
LINC00648-204ENST00000557749 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
LINC00648-204ENST00000557749 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
LINC00648-204ENST00000557749 EVX2Q03828 476 aa16.67■□□□□ 0.26
LINC00648-204ENST00000557749 TECPR2O15040 1411 aa16.67■□□□□ 0.26
LINC00648-204ENST00000557749 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
LINC00648-204ENST00000557749 LRPPRCP42704 1394 aaKnown RBP16.65■□□□□ 0.26
LINC00648-204ENST00000557749 MST1RQ04912 1400 aa16.65■□□□□ 0.26
LINC00648-204ENST00000557749 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
LINC00648-204ENST00000557749 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
LINC00648-204ENST00000557749 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.26
LINC00648-204ENST00000557749 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
LINC00648-204ENST00000557749 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
LINC00648-204ENST00000557749 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
LINC00648-204ENST00000557749 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
LINC00648-204ENST00000557749 SPATA31A6Q5VVP1 1343 aa16.63■□□□□ 0.25
LINC00648-204ENST00000557749 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
LINC00648-204ENST00000557749 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
LINC00648-204ENST00000557749 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
LINC00648-204ENST00000557749 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
LINC00648-204ENST00000557749 CDC42BPGQ6DT37 1551 aa16.61■□□□□ 0.25
LINC00648-204ENST00000557749 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
LINC00648-204ENST00000557749 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
LINC00648-204ENST00000557749 SOCS7O14512 581 aa16.58■□□□□ 0.24
LINC00648-204ENST00000557749 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
LINC00648-204ENST00000557749 LRRC59Q96AG4 307 aaKnown RBP16.58■□□□□ 0.24
LINC00648-204ENST00000557749 C1orf167Q5SNV9 1468 aa16.58■□□□□ 0.24
LINC00648-204ENST00000557749 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
LINC00648-204ENST00000557749 NHSL1Q5SYE7 1610 aa16.57■□□□□ 0.24
LINC00648-204ENST00000557749 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
LINC00648-204ENST00000557749 STK26Q9P289 416 aa16.57■□□□□ 0.24
LINC00648-204ENST00000557749 HAX1O00165 279 aa16.56■□□□□ 0.24
LINC00648-204ENST00000557749 ILDR2Q71H61 639 aa16.56■□□□□ 0.24
LINC00648-204ENST00000557749 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
LINC00648-204ENST00000557749 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
LINC00648-204ENST00000557749 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
LINC00648-204ENST00000557749 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
LINC00648-204ENST00000557749 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
LINC00648-204ENST00000557749 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
LINC00648-204ENST00000557749 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
LINC00648-204ENST00000557749 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
LINC00648-204ENST00000557749 DCAF8Q5TAQ9 597 aa16.52■□□□□ 0.24
LINC00648-204ENST00000557749 FAM212AQ96EL1 285 aa16.51■□□□□ 0.23
LINC00648-204ENST00000557749 POGKQ9P215 609 aa16.51■□□□□ 0.23
LINC00648-204ENST00000557749 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
LINC00648-204ENST00000557749 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
LINC00648-204ENST00000557749 ADGRB1O14514 1584 aa16.49■□□□□ 0.23
LINC00648-204ENST00000557749 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
LINC00648-204ENST00000557749 ZNF772Q68DY9 489 aaPredicted RBP16.49■□□□□ 0.23
LINC00648-204ENST00000557749 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
LINC00648-204ENST00000557749 KIF1AQ12756 1690 aa16.49■□□□□ 0.23
LINC00648-204ENST00000557749 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
LINC00648-204ENST00000557749 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
LINC00648-204ENST00000557749 GSE1Q14687 1217 aa16.47■□□□□ 0.23
LINC00648-204ENST00000557749 PRAM1Q96QH2 718 aa16.47■□□□□ 0.23
LINC00648-204ENST00000557749 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
LINC00648-204ENST00000557749 FMN2Q9NZ56 1722 aa16.47■□□□□ 0.23
LINC00648-204ENST00000557749 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
LINC00648-204ENST00000557749 ANKARQ7Z5J8 1434 aa16.46■□□□□ 0.23
LINC00648-204ENST00000557749 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms