RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 RIMBP3CA6NJZ7 1639 aa9.52□□□□□ -0.89
FOXN3-218ENST00000557718 RIMBP3BA6NNM3 1639 aa9.52□□□□□ -0.89
FOXN3-218ENST00000557718 RIMBP3Q9UFD9 1639 aa9.52□□□□□ -0.89
FOXN3-218ENST00000557718 CFAP43Q8NDM7 1665 aa9.51□□□□□ -0.89
FOXN3-218ENST00000557718 RBM46Q8TBY0 533 aaKnown RBP9.51□□□□□ -0.89
FOXN3-218ENST00000557718 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
FOXN3-218ENST00000557718 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
FOXN3-218ENST00000557718 DNAJB2P25686 324 aa9.5□□□□□ -0.89
FOXN3-218ENST00000557718 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
FOXN3-218ENST00000557718 ABCA8O94911 1581 aa9.5□□□□□ -0.89
FOXN3-218ENST00000557718 COPS2P61201 443 aa9.49□□□□□ -0.89
FOXN3-218ENST00000557718 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
FOXN3-218ENST00000557718 ARHGEF11O15085 1522 aa9.49□□□□□ -0.89
FOXN3-218ENST00000557718 FCHSD2O94868 740 aa9.48□□□□□ -0.89
FOXN3-218ENST00000557718 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
FOXN3-218ENST00000557718 TMEM134Q9H6X4 195 aa9.48□□□□□ -0.89
FOXN3-218ENST00000557718 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
FOXN3-218ENST00000557718 PRR14Q9BWN1 585 aa9.47□□□□□ -0.89
FOXN3-218ENST00000557718 HECW1Q76N89 1606 aa9.46□□□□□ -0.89
FOXN3-218ENST00000557718 ADCY10Q96PN6 1610 aa9.46□□□□□ -0.89
FOXN3-218ENST00000557718 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
FOXN3-218ENST00000557718 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
FOXN3-218ENST00000557718 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
FOXN3-218ENST00000557718 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
FOXN3-218ENST00000557718 FYCO1Q9BQS8 1478 aa9.46□□□□□ -0.9
FOXN3-218ENST00000557718 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
FOXN3-218ENST00000557718 PCDHB3Q9Y5E6 796 aa9.45□□□□□ -0.9
FOXN3-218ENST00000557718 FMN1Q68DA7 1419 aa9.45□□□□□ -0.9
FOXN3-218ENST00000557718 CASKIN1Q8WXD9 1431 aa9.45□□□□□ -0.9
FOXN3-218ENST00000557718 ZPR1O75312 459 aa9.44□□□□□ -0.9
FOXN3-218ENST00000557718 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
FOXN3-218ENST00000557718 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
FOXN3-218ENST00000557718 RBM26Q5T8P6 1007 aaKnown RBP9.43□□□□□ -0.9
FOXN3-218ENST00000557718 Q6ZNB5 142 aa9.43□□□□□ -0.9
FOXN3-218ENST00000557718 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
FOXN3-218ENST00000557718 CDK13Q14004 1512 aaKnown RBP9.42□□□□□ -0.9
FOXN3-218ENST00000557718 ABCC2Q92887 1545 aa9.42□□□□□ -0.9
FOXN3-218ENST00000557718 HIC1Q14526 733 aa9.42□□□□□ -0.9
FOXN3-218ENST00000557718 BLOC1S3Q6QNY0 202 aa9.42□□□□□ -0.9
FOXN3-218ENST00000557718 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-218ENST00000557718 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 PTPRGP23470 1445 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
FOXN3-218ENST00000557718 OATP04181 439 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 GGCXP38435 758 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 LAPTM4AQ15012 233 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 EPRSP07814 1512 aaKnown RBP9.41□□□□□ -0.9
FOXN3-218ENST00000557718 MAP3K1Q13233 1512 aa9.41□□□□□ -0.9
FOXN3-218ENST00000557718 GFRA3O60609 400 aa9.4□□□□□ -0.9
FOXN3-218ENST00000557718 KMT5BQ4FZB7 885 aa9.4□□□□□ -0.9
FOXN3-218ENST00000557718 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
FOXN3-218ENST00000557718 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.91
FOXN3-218ENST00000557718 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
FOXN3-218ENST00000557718 CFHP08603 1231 aa9.39□□□□□ -0.91
FOXN3-218ENST00000557718 SLC10A3P09131 477 aa9.39□□□□□ -0.91
FOXN3-218ENST00000557718 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
FOXN3-218ENST00000557718 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
FOXN3-218ENST00000557718 TTBK1Q5TCY1 1321 aaPredicted RBP9.38□□□□□ -0.91
FOXN3-218ENST00000557718 METTL3Q86U44 580 aaKnown RBP9.38□□□□□ -0.91
FOXN3-218ENST00000557718 ATP10BO94823 1461 aa9.37□□□□□ -0.91
FOXN3-218ENST00000557718 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
FOXN3-218ENST00000557718 FECHP22830 423 aa9.37□□□□□ -0.91
FOXN3-218ENST00000557718 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
FOXN3-218ENST00000557718 KIF14Q15058 1648 aa9.36□□□□□ -0.91
FOXN3-218ENST00000557718 GNPATO15228 680 aa9.36□□□□□ -0.91
FOXN3-218ENST00000557718 GPR37O15354 613 aa9.36□□□□□ -0.91
FOXN3-218ENST00000557718 TLL1O43897 1013 aa9.36□□□□□ -0.91
FOXN3-218ENST00000557718 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
FOXN3-218ENST00000557718 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
FOXN3-218ENST00000557718 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
FOXN3-218ENST00000557718 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
FOXN3-218ENST00000557718 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
FOXN3-218ENST00000557718 CDC42BPAQ5VT25 1732 aa9.34□□□□□ -0.92
FOXN3-218ENST00000557718 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-218ENST00000557718 KANK4Q5T7N3 995 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-218ENST00000557718 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
FOXN3-218ENST00000557718 LCE2BO14633 110 aa9.32□□□□□ -0.92
FOXN3-218ENST00000557718 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
FOXN3-218ENST00000557718 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
FOXN3-218ENST00000557718 NR1I2O75469 434 aa9.31□□□□□ -0.92
FOXN3-218ENST00000557718 RSPH4AQ5TD94 716 aa9.31□□□□□ -0.92
FOXN3-218ENST00000557718 PPARGC1BQ86YN6 1023 aaKnown RBP9.31□□□□□ -0.92
FOXN3-218ENST00000557718 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
FOXN3-218ENST00000557718 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
FOXN3-218ENST00000557718 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
FOXN3-218ENST00000557718 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
FOXN3-218ENST00000557718 MYO5CQ9NQX4 1742 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 S1PR4O95977 384 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 ADH1BP00325 375 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 SLC19A1P41440 591 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 ANKLE1Q8NAG6 615 aa9.29□□□□□ -0.92
FOXN3-218ENST00000557718 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
FOXN3-218ENST00000557718 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
FOXN3-218ENST00000557718 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
FOXN3-218ENST00000557718 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
FOXN3-218ENST00000557718 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-218ENST00000557718 PUS10Q3MIT2 529 aaKnown RBP9.28□□□□□ -0.92
FOXN3-218ENST00000557718 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms