RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
PPP4R3A-212ENST00000557382 CARD14Q9BXL6 1004 aa11.84□□□□□ -0.51
PPP4R3A-212ENST00000557382 TRAK1Q9UPV9 953 aa11.84□□□□□ -0.51
PPP4R3A-212ENST00000557382 TSPOAP1O95153 1857 aa11.84□□□□□ -0.51
PPP4R3A-212ENST00000557382 ZNF521Q96K83 1311 aa11.84□□□□□ -0.51
PPP4R3A-212ENST00000557382 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
PPP4R3A-212ENST00000557382 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
PPP4R3A-212ENST00000557382 TULP4Q9NRJ4 1543 aa11.82□□□□□ -0.52
PPP4R3A-212ENST00000557382 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
PPP4R3A-212ENST00000557382 FANCIQ9NVI1 1328 aa11.82□□□□□ -0.52
PPP4R3A-212ENST00000557382 ANKRD36BQ8N2N9 1353 aa11.81□□□□□ -0.52
PPP4R3A-212ENST00000557382 NSD3Q9BZ95 1437 aa11.81□□□□□ -0.52
PPP4R3A-212ENST00000557382 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
PPP4R3A-212ENST00000557382 TMEM132EQ6IEE7 984 aa11.8□□□□□ -0.52
PPP4R3A-212ENST00000557382 KIF13AQ9H1H9 1805 aa11.8□□□□□ -0.52
PPP4R3A-212ENST00000557382 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
PPP4R3A-212ENST00000557382 ARHGEF40Q8TER5 1519 aa11.8□□□□□ -0.52
PPP4R3A-212ENST00000557382 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
PPP4R3A-212ENST00000557382 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
PPP4R3A-212ENST00000557382 DLC1Q96QB1 1528 aa11.79□□□□□ -0.52
PPP4R3A-212ENST00000557382 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
PPP4R3A-212ENST00000557382 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 SHPRHQ149N8 1683 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 PTPRMP28827 1452 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 MORC1Q86VD1 984 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 ATAD2Q6PL18 1390 aa11.78□□□□□ -0.52
PPP4R3A-212ENST00000557382 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.52
PPP4R3A-212ENST00000557382 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
PPP4R3A-212ENST00000557382 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.53
PPP4R3A-212ENST00000557382 SLC12A5Q9H2X9 1139 aa11.77□□□□□ -0.53
PPP4R3A-212ENST00000557382 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
PPP4R3A-212ENST00000557382 MED14O60244 1454 aa11.76□□□□□ -0.53
PPP4R3A-212ENST00000557382 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
PPP4R3A-212ENST00000557382 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
PPP4R3A-212ENST00000557382 E9PSI1 815 aa11.75□□□□□ -0.53
PPP4R3A-212ENST00000557382 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
PPP4R3A-212ENST00000557382 CFAP53Q96M91 514 aa11.75□□□□□ -0.53
PPP4R3A-212ENST00000557382 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
PPP4R3A-212ENST00000557382 ABCC11Q96J66 1382 aa11.74□□□□□ -0.53
PPP4R3A-212ENST00000557382 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
PPP4R3A-212ENST00000557382 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
PPP4R3A-212ENST00000557382 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
PPP4R3A-212ENST00000557382 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
PPP4R3A-212ENST00000557382 RIMS2Q9UQ26 1411 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 APAF1O14727 1248 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
PPP4R3A-212ENST00000557382 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.53
PPP4R3A-212ENST00000557382 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.53
PPP4R3A-212ENST00000557382 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
PPP4R3A-212ENST00000557382 CCDC27Q2M243 656 aa11.71□□□□□ -0.53
PPP4R3A-212ENST00000557382 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.53
PPP4R3A-212ENST00000557382 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 MS4A1P11836 297 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 POGKQ9P215 609 aa11.7□□□□□ -0.54
PPP4R3A-212ENST00000557382 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
PPP4R3A-212ENST00000557382 WDR63Q8IWG1 891 aa11.69□□□□□ -0.54
PPP4R3A-212ENST00000557382 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
PPP4R3A-212ENST00000557382 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
PPP4R3A-212ENST00000557382 ATP7BP35670 1465 aa11.69□□□□□ -0.54
PPP4R3A-212ENST00000557382 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 ADGRB2O60241 1585 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 MTHFSP49914 203 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 STK26Q9P289 416 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
PPP4R3A-212ENST00000557382 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
PPP4R3A-212ENST00000557382 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
PPP4R3A-212ENST00000557382 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
PPP4R3A-212ENST00000557382 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
PPP4R3A-212ENST00000557382 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
PPP4R3A-212ENST00000557382 TECPR2O15040 1411 aa11.66□□□□□ -0.54
PPP4R3A-212ENST00000557382 MINK1Q8N4C8 1332 aaPredicted RBP11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 PLIN1O60240 522 aa11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 AAMPQ13685 434 aa11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
PPP4R3A-212ENST00000557382 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 CDC42BPGQ6DT37 1551 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 CPS1P31327 1500 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 TNRQ92752 1358 aa11.64□□□□□ -0.55
PPP4R3A-212ENST00000557382 FYB1O15117 783 aa11.63□□□□□ -0.55
PPP4R3A-212ENST00000557382 NPM3O75607 178 aaKnown RBP11.63□□□□□ -0.55
PPP4R3A-212ENST00000557382 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
PPP4R3A-212ENST00000557382 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
PPP4R3A-212ENST00000557382 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
PPP4R3A-212ENST00000557382 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms