RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 UBAP1LF5GYI3 381 aa14.86□□□□□ -0.03
HNRNPC-228ENST00000557033 SYNMO15061 1565 aa14.85□□□□□ -0.03
HNRNPC-228ENST00000557033 TESPA1A2RU30 521 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-228ENST00000557033 TOM1O60784 492 aa14.84□□□□□ -0.03
HNRNPC-228ENST00000557033 NUP155O75694 1391 aa14.84□□□□□ -0.03
HNRNPC-228ENST00000557033 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
HNRNPC-228ENST00000557033 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
HNRNPC-228ENST00000557033 IQGAP3Q86VI3 1631 aa14.82□□□□□ -0.04
HNRNPC-228ENST00000557033 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
HNRNPC-228ENST00000557033 SEMA3EO15041 775 aa14.81□□□□□ -0.04
HNRNPC-228ENST00000557033 E2F4Q16254 413 aa14.81□□□□□ -0.04
HNRNPC-228ENST00000557033 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
HNRNPC-228ENST00000557033 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
HNRNPC-228ENST00000557033 MFRPQ9BY79 579 aa14.8□□□□□ -0.04
HNRNPC-228ENST00000557033 E9PCH4 1651 aa14.79□□□□□ -0.04
HNRNPC-228ENST00000557033 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
HNRNPC-228ENST00000557033 STRCP1A6NGW2 1772 aa14.78□□□□□ -0.04
HNRNPC-228ENST00000557033 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.04
HNRNPC-228ENST00000557033 ZMYND10O75800 440 aa14.77□□□□□ -0.05
HNRNPC-228ENST00000557033 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
HNRNPC-228ENST00000557033 TMEM131LA2VDJ0 1609 aa14.76□□□□□ -0.05
HNRNPC-228ENST00000557033 NAIPQ13075 1403 aa14.75□□□□□ -0.05
HNRNPC-228ENST00000557033 KCNA6P17658 529 aa14.75□□□□□ -0.05
HNRNPC-228ENST00000557033 SLC26A8Q96RN1 970 aa14.75□□□□□ -0.05
HNRNPC-228ENST00000557033 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
HNRNPC-228ENST00000557033 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
HNRNPC-228ENST00000557033 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
HNRNPC-228ENST00000557033 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
HNRNPC-228ENST00000557033 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
HNRNPC-228ENST00000557033 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
HNRNPC-228ENST00000557033 HFM1A2PYH4 1435 aa14.72□□□□□ -0.05
HNRNPC-228ENST00000557033 PPP1R37O75864 691 aa14.71□□□□□ -0.05
HNRNPC-228ENST00000557033 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
HNRNPC-228ENST00000557033 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-228ENST00000557033 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-228ENST00000557033 TRIM52Q96A61 297 aa14.69□□□□□ -0.06
HNRNPC-228ENST00000557033 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
HNRNPC-228ENST00000557033 HSPA1LP34931 641 aa14.68□□□□□ -0.06
HNRNPC-228ENST00000557033 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
HNRNPC-228ENST00000557033 PCDHB13Q9Y5F0 798 aa14.68□□□□□ -0.06
HNRNPC-228ENST00000557033 SPHKAPQ2M3C7 1700 aa14.68□□□□□ -0.06
HNRNPC-228ENST00000557033 SMYD5Q6GMV2 418 aa14.67□□□□□ -0.06
HNRNPC-228ENST00000557033 DISP3Q9P2K9 1392 aa14.67□□□□□ -0.06
HNRNPC-228ENST00000557033 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-228ENST00000557033 TMEM94Q12767 1356 aa14.66□□□□□ -0.06
HNRNPC-228ENST00000557033 PSEN1P49768 467 aa14.66□□□□□ -0.06
HNRNPC-228ENST00000557033 BARGINQ6ZT62 677 aa14.66□□□□□ -0.06
HNRNPC-228ENST00000557033 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-228ENST00000557033 NWD1Q149M9 1564 aa14.65□□□□□ -0.06
HNRNPC-228ENST00000557033 NKTRP30414 1462 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-228ENST00000557033 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
HNRNPC-228ENST00000557033 NUTM2DQ5VT03 806 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-228ENST00000557033 ACIN1Q9UKV3 1341 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-228ENST00000557033 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-228ENST00000557033 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-228ENST00000557033 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
HNRNPC-228ENST00000557033 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
HNRNPC-228ENST00000557033 TRPM2O94759 1503 aa14.63□□□□□ -0.07
HNRNPC-228ENST00000557033 DIP2AQ14689 1571 aa14.62□□□□□ -0.07
HNRNPC-228ENST00000557033 FBXO22Q8NEZ5 403 aa14.62□□□□□ -0.07
HNRNPC-228ENST00000557033 NCOA3Q9Y6Q9 1424 aa14.62□□□□□ -0.07
HNRNPC-228ENST00000557033 FAM135BQ49AJ0 1406 aa14.61□□□□□ -0.07
HNRNPC-228ENST00000557033 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-228ENST00000557033 MSH6P52701 1360 aa14.6□□□□□ -0.07
HNRNPC-228ENST00000557033 KIF1BO60333 1816 aa14.59□□□□□ -0.07
HNRNPC-228ENST00000557033 CLTCL1P53675 1640 aa14.59□□□□□ -0.07
HNRNPC-228ENST00000557033 NLRP6P59044 892 aa14.59□□□□□ -0.07
HNRNPC-228ENST00000557033 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-228ENST00000557033 ZMYND15Q9H091 742 aa14.58□□□□□ -0.08
HNRNPC-228ENST00000557033 PODXL2Q9NZ53 605 aa14.58□□□□□ -0.08
HNRNPC-228ENST00000557033 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
HNRNPC-228ENST00000557033 RPGRIP1LQ68CZ1 1315 aa14.58□□□□□ -0.08
HNRNPC-228ENST00000557033 SETBP1Q9Y6X0 1596 aa14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 AK7Q96M32 723 aa14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 C19orf44Q9H6X5 657 aa14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
HNRNPC-228ENST00000557033 SOX12O15370 315 aa14.56□□□□□ -0.08
HNRNPC-228ENST00000557033 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
HNRNPC-228ENST00000557033 ILDR2Q71H61 639 aa14.55□□□□□ -0.08
HNRNPC-228ENST00000557033 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
HNRNPC-228ENST00000557033 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
HNRNPC-228ENST00000557033 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
HNRNPC-228ENST00000557033 SETD5Q9C0A6 1442 aa14.53□□□□□ -0.08
HNRNPC-228ENST00000557033 PDE4AP27815 886 aa14.53□□□□□ -0.08
HNRNPC-228ENST00000557033 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
HNRNPC-228ENST00000557033 METP08581 1390 aa14.52□□□□□ -0.08
HNRNPC-228ENST00000557033 ATF3P18847 181 aa14.52□□□□□ -0.09
HNRNPC-228ENST00000557033 GPBP1L1Q9HC44 474 aaPredicted RBP14.52□□□□□ -0.09
HNRNPC-228ENST00000557033 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
HNRNPC-228ENST00000557033 MFSD10Q14728 455 aa14.51□□□□□ -0.09
HNRNPC-228ENST00000557033 ROBO1Q9Y6N7 1651 aa14.51□□□□□ -0.09
HNRNPC-228ENST00000557033 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
HNRNPC-228ENST00000557033 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
HNRNPC-228ENST00000557033 IL27Q8NEV9 243 aa14.5□□□□□ -0.09
HNRNPC-228ENST00000557033 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
HNRNPC-228ENST00000557033 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
HNRNPC-228ENST00000557033 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-228ENST00000557033 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms