RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IER5LQ5T953 404 aa9.37□□□□□ -0.91
ATXN3-245ENST00000556958 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
ATXN3-245ENST00000556958 CASKIN1Q8WXD9 1431 aa9.37□□□□□ -0.91
ATXN3-245ENST00000556958 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
ATXN3-245ENST00000556958 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
ATXN3-245ENST00000556958 COL16A1Q07092 1604 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-245ENST00000556958 HRCP23327 699 aa9.35□□□□□ -0.91
ATXN3-245ENST00000556958 FKBP8Q14318 412 aa9.35□□□□□ -0.91
ATXN3-245ENST00000556958 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
ATXN3-245ENST00000556958 SETD5Q9C0A6 1442 aa9.34□□□□□ -0.91
ATXN3-245ENST00000556958 PPP1R15AO75807 674 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-245ENST00000556958 IDI1Q13907 227 aa9.34□□□□□ -0.91
ATXN3-245ENST00000556958 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-245ENST00000556958 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
ATXN3-245ENST00000556958 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
ATXN3-245ENST00000556958 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-245ENST00000556958 DEFB132Q7Z7B7 95 aa9.33□□□□□ -0.92
ATXN3-245ENST00000556958 MTUS2Q5JR59 1369 aa9.33□□□□□ -0.92
ATXN3-245ENST00000556958 TIAM1Q13009 1591 aa9.32□□□□□ -0.92
ATXN3-245ENST00000556958 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-245ENST00000556958 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-245ENST00000556958 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
ATXN3-245ENST00000556958 TMEM121BQ9BXQ6 578 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-245ENST00000556958 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
ATXN3-245ENST00000556958 ARHGAP31Q2M1Z3 1444 aa9.31□□□□□ -0.92
ATXN3-245ENST00000556958 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
ATXN3-245ENST00000556958 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-245ENST00000556958 SLC52A1Q9NWF4 448 aa9.3□□□□□ -0.92
ATXN3-245ENST00000556958 XIRP1Q702N8 1843 aaKnown RBP9.3□□□□□ -0.92
ATXN3-245ENST00000556958 CCDC141Q6ZP82 1450 aa9.29□□□□□ -0.92
ATXN3-245ENST00000556958 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
ATXN3-245ENST00000556958 BAG6P46379 1132 aa9.29□□□□□ -0.92
ATXN3-245ENST00000556958 CDC42BPAQ5VT25 1732 aa9.28□□□□□ -0.92
ATXN3-245ENST00000556958 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATXN3-245ENST00000556958 TET3O43151 1660 aa9.28□□□□□ -0.92
ATXN3-245ENST00000556958 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
ATXN3-245ENST00000556958 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
ATXN3-245ENST00000556958 ATRNO75882 1429 aa9.27□□□□□ -0.93
ATXN3-245ENST00000556958 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
ATXN3-245ENST00000556958 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
ATXN3-245ENST00000556958 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
ATXN3-245ENST00000556958 EFCAB6Q5THR3 1501 aa9.26□□□□□ -0.93
ATXN3-245ENST00000556958 UBR1Q8IWV7 1749 aa9.25□□□□□ -0.93
ATXN3-245ENST00000556958 LRP5O75197 1615 aa9.25□□□□□ -0.93
ATXN3-245ENST00000556958 FYCO1Q9BQS8 1478 aa9.25□□□□□ -0.93
ATXN3-245ENST00000556958 KANK1Q14678 1352 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
ATXN3-245ENST00000556958 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
ATXN3-245ENST00000556958 SGIP1Q9BQI5 828 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 PCDHB13Q9Y5F0 798 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 DIP2AQ14689 1571 aa9.24□□□□□ -0.93
ATXN3-245ENST00000556958 DCCP43146 1447 aa9.23□□□□□ -0.93
ATXN3-245ENST00000556958 PLCG2P16885 1265 aa9.23□□□□□ -0.93
ATXN3-245ENST00000556958 PROM2Q8N271 834 aa9.23□□□□□ -0.93
ATXN3-245ENST00000556958 MROH1Q8NDA8 1641 aa9.23□□□□□ -0.93
ATXN3-245ENST00000556958 C1QTNF8P60827 252 aa9.22□□□□□ -0.93
ATXN3-245ENST00000556958 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-245ENST00000556958 KDM5AP29375 1690 aaKnown RBP9.22□□□□□ -0.93
ATXN3-245ENST00000556958 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
ATXN3-245ENST00000556958 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.94
ATXN3-245ENST00000556958 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
ATXN3-245ENST00000556958 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
ATXN3-245ENST00000556958 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
ATXN3-245ENST00000556958 SNPHO15079 494 aa9.2□□□□□ -0.94
ATXN3-245ENST00000556958 ZNF784Q8NCA9 323 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-245ENST00000556958 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
ATXN3-245ENST00000556958 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
ATXN3-245ENST00000556958 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-245ENST00000556958 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-245ENST00000556958 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
ATXN3-245ENST00000556958 EP400Q96L91 3159 aa9.19□□□□□ -0.94
ATXN3-245ENST00000556958 IFNL1Q8IU54 200 aa9.19□□□□□ -0.94
ATXN3-245ENST00000556958 MST1RQ04912 1400 aa9.19□□□□□ -0.94
ATXN3-245ENST00000556958 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
ATXN3-245ENST00000556958 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
ATXN3-245ENST00000556958 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-245ENST00000556958 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
ATXN3-245ENST00000556958 RIMS2Q9UQ26 1411 aa9.18□□□□□ -0.94
ATXN3-245ENST00000556958 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-245ENST00000556958 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
ATXN3-245ENST00000556958 ZFYVE9O95405 1425 aa9.16□□□□□ -0.94
ATXN3-245ENST00000556958 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
ATXN3-245ENST00000556958 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
ATXN3-245ENST00000556958 RRP7BPQ9NSQ0 103 aa9.16□□□□□ -0.94
ATXN3-245ENST00000556958 PIK3C2BO00750 1634 aa9.16□□□□□ -0.94
ATXN3-245ENST00000556958 NOS1P29475 1434 aa9.15□□□□□ -0.94
ATXN3-245ENST00000556958 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
ATXN3-245ENST00000556958 SPON1Q9HCB6 807 aa9.15□□□□□ -0.94
ATXN3-245ENST00000556958 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
ATXN3-245ENST00000556958 ADAMTS13Q76LX8 1427 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 A0A0G2JS52 829 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 MYT1Q01538 1121 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 VPS72Q15906 364 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 NBPF8Q3BBV2 869 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
ATXN3-245ENST00000556958 RPRD2Q5VT52 1461 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms