RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PLEKHH1Q9ULM0 1364 aa24.86■■□□□ 1.57
PSEN1-218ENST00000556864 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
PSEN1-218ENST00000556864 C19orf44Q9H6X5 657 aa24.84■■□□□ 1.57
PSEN1-218ENST00000556864 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
PSEN1-218ENST00000556864 WAPLQ7Z5K2 1190 aa24.83■■□□□ 1.57
PSEN1-218ENST00000556864 CENPJQ9HC77 1338 aaPredicted RBP24.82■■□□□ 1.56
PSEN1-218ENST00000556864 ATF3P18847 181 aa24.81■■□□□ 1.56
PSEN1-218ENST00000556864 CADPS2Q86UW7 1296 aa24.81■■□□□ 1.56
PSEN1-218ENST00000556864 TOM1O60784 492 aa24.8■■□□□ 1.56
PSEN1-218ENST00000556864 UBAP1LF5GYI3 381 aa24.79■■□□□ 1.56
PSEN1-218ENST00000556864 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
PSEN1-218ENST00000556864 USP47Q96K76 1375 aa24.77■■□□□ 1.56
PSEN1-218ENST00000556864 FMN2Q9NZ56 1722 aa24.76■■□□□ 1.55
PSEN1-218ENST00000556864 MINK1Q8N4C8 1332 aaPredicted RBP24.75■■□□□ 1.55
PSEN1-218ENST00000556864 SBNO2Q9Y2G9 1366 aa24.74■■□□□ 1.55
PSEN1-218ENST00000556864 MST1RQ04912 1400 aa24.74■■□□□ 1.55
PSEN1-218ENST00000556864 TULP4Q9NRJ4 1543 aa24.71■■□□□ 1.55
PSEN1-218ENST00000556864 ANKARQ7Z5J8 1434 aa24.7■■□□□ 1.55
PSEN1-218ENST00000556864 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.54
PSEN1-218ENST00000556864 FBXO41Q8TF61 875 aa24.69■■□□□ 1.54
PSEN1-218ENST00000556864 C1orf167Q5SNV9 1468 aa24.69■■□□□ 1.54
PSEN1-218ENST00000556864 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
PSEN1-218ENST00000556864 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
PSEN1-218ENST00000556864 SLAIN2Q9P270 581 aa24.67■■□□□ 1.54
PSEN1-218ENST00000556864 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
PSEN1-218ENST00000556864 WASLO00401 505 aaPredicted RBP24.66■■□□□ 1.54
PSEN1-218ENST00000556864 SLC24A1O60721 1099 aa24.65■■□□□ 1.54
PSEN1-218ENST00000556864 PIP4K2BP78356 416 aa24.65■■□□□ 1.54
PSEN1-218ENST00000556864 EVC2Q86UK5 1308 aa24.64■■□□□ 1.54
PSEN1-218ENST00000556864 KIF1AQ12756 1690 aa24.64■■□□□ 1.53
PSEN1-218ENST00000556864 ITSN1Q15811 1721 aa24.64■■□□□ 1.53
PSEN1-218ENST00000556864 EIF4G2P78344 907 aaKnown RBP eCLIP24.63■■□□□ 1.53
PSEN1-218ENST00000556864 USP32Q8NFA0 1604 aa24.62■■□□□ 1.53
PSEN1-218ENST00000556864 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
PSEN1-218ENST00000556864 ATP7BP35670 1465 aa24.62■■□□□ 1.53
PSEN1-218ENST00000556864 TOPAZ1Q8N9V7 1692 aa24.6■■□□□ 1.53
PSEN1-218ENST00000556864 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.53
PSEN1-218ENST00000556864 SRPK2P78362 688 aaKnown RBP24.58■■□□□ 1.53
PSEN1-218ENST00000556864 CDK19Q9BWU1 502 aa24.58■■□□□ 1.53
PSEN1-218ENST00000556864 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
PSEN1-218ENST00000556864 BRINP3Q76B58 766 aa24.57■■□□□ 1.52
PSEN1-218ENST00000556864 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
PSEN1-218ENST00000556864 ATAD2Q6PL18 1390 aa24.56■■□□□ 1.52
PSEN1-218ENST00000556864 TESK2Q96S53 571 aa24.56■■□□□ 1.52
PSEN1-218ENST00000556864 HSPA5P11021 654 aaKnown RBP24.55■■□□□ 1.52
PSEN1-218ENST00000556864 ESCO1Q5FWF5 840 aa24.55■■□□□ 1.52
PSEN1-218ENST00000556864 TMF1P82094 1093 aa24.54■■□□□ 1.52
PSEN1-218ENST00000556864 PRR36Q9H6K5 1346 aa24.54■■□□□ 1.52
PSEN1-218ENST00000556864 NUDT16Q96DE0 195 aaKnown RBP24.52■■□□□ 1.52
PSEN1-218ENST00000556864 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
PSEN1-218ENST00000556864 RGPD8O14715 1765 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-218ENST00000556864 CDCA8Q53HL2 280 aa24.51■■□□□ 1.51
PSEN1-218ENST00000556864 ORAI2Q96SN7 254 aa24.51■■□□□ 1.51
PSEN1-218ENST00000556864 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
PSEN1-218ENST00000556864 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
PSEN1-218ENST00000556864 PUS7Q96PZ0 661 aaKnown RBP24.5■■□□□ 1.51
PSEN1-218ENST00000556864 NPHP3Q7Z494 1330 aa24.5■■□□□ 1.51
PSEN1-218ENST00000556864 PPIP5K1Q6PFW1 1433 aa24.5■■□□□ 1.51
PSEN1-218ENST00000556864 CCDC61Q9Y6R9 512 aa24.49■■□□□ 1.51
PSEN1-218ENST00000556864 DISP3Q9P2K9 1392 aa24.49■■□□□ 1.51
PSEN1-218ENST00000556864 COL16A1Q07092 1604 aaPredicted RBP24.48■■□□□ 1.51
PSEN1-218ENST00000556864 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
PSEN1-218ENST00000556864 PXDNQ92626 1479 aa24.44■■□□□ 1.5
PSEN1-218ENST00000556864 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
PSEN1-218ENST00000556864 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
PSEN1-218ENST00000556864 HSPA1LP34931 641 aa24.42■■□□□ 1.5
PSEN1-218ENST00000556864 NGDNQ8NEJ9 315 aaKnown RBP24.42■■□□□ 1.5
PSEN1-218ENST00000556864 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
PSEN1-218ENST00000556864 FOXO3O43524 673 aa24.4■■□□□ 1.5
PSEN1-218ENST00000556864 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.5
PSEN1-218ENST00000556864 ILDR1Q86SU0 546 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-218ENST00000556864 PSME1Q06323 249 aa24.38■■□□□ 1.49
PSEN1-218ENST00000556864 CABP1Q9NZU7 370 aa24.38■■□□□ 1.49
PSEN1-218ENST00000556864 ACEP12821 1306 aa24.37■■□□□ 1.49
PSEN1-218ENST00000556864 MYOM1P52179 1685 aa24.37■■□□□ 1.49
PSEN1-218ENST00000556864 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
PSEN1-218ENST00000556864 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-218ENST00000556864 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
PSEN1-218ENST00000556864 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
PSEN1-218ENST00000556864 SBNO1A3KN83 1393 aa24.36■■□□□ 1.49
PSEN1-218ENST00000556864 BRD4O60885 1362 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-218ENST00000556864 SHPRHQ149N8 1683 aa24.36■■□□□ 1.49
PSEN1-218ENST00000556864 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
PSEN1-218ENST00000556864 KRT28Q7Z3Y7 464 aa24.35■■□□□ 1.49
PSEN1-218ENST00000556864 JCADQ9P266 1359 aa24.34■■□□□ 1.49
PSEN1-218ENST00000556864 LRRC59Q96AG4 307 aaKnown RBP24.34■■□□□ 1.49
PSEN1-218ENST00000556864 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
PSEN1-218ENST00000556864 USP6P35125 1406 aa24.34■■□□□ 1.49
PSEN1-218ENST00000556864 XPCQ01831 940 aaPredicted RBP24.33■■□□□ 1.49
PSEN1-218ENST00000556864 HDGFL2Q7Z4V5 671 aaPredicted RBP24.33■■□□□ 1.49
PSEN1-218ENST00000556864 TERF2IPQ9NYB0 399 aa24.33■■□□□ 1.49
PSEN1-218ENST00000556864 NRKQ7Z2Y5 1582 aa24.33■■□□□ 1.48
PSEN1-218ENST00000556864 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
PSEN1-218ENST00000556864 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
PSEN1-218ENST00000556864 ANKRD36BQ8N2N9 1353 aa24.31■■□□□ 1.48
PSEN1-218ENST00000556864 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
PSEN1-218ENST00000556864 CD163L1Q9NR16 1453 aa24.31■■□□□ 1.48
PSEN1-218ENST00000556864 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
PSEN1-218ENST00000556864 ZNF692Q9BU19 519 aaPredicted RBP24.3■■□□□ 1.48
PSEN1-218ENST00000556864 COL22A1Q8NFW1 1626 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms