RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 CPS1P31327 1500 aa12.75□□□□□ -0.37
PRKCH-222ENST00000556778 PIP4K2BP78356 416 aa12.75□□□□□ -0.37
PRKCH-222ENST00000556778 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
PRKCH-222ENST00000556778 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
PRKCH-222ENST00000556778 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
PRKCH-222ENST00000556778 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
PRKCH-222ENST00000556778 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
PRKCH-222ENST00000556778 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
PRKCH-222ENST00000556778 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
PRKCH-222ENST00000556778 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
PRKCH-222ENST00000556778 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
PRKCH-222ENST00000556778 MYOM2P54296 1465 aa12.72□□□□□ -0.37
PRKCH-222ENST00000556778 PLEKHH1Q9ULM0 1364 aa12.71□□□□□ -0.37
PRKCH-222ENST00000556778 TRAK1Q9UPV9 953 aa12.71□□□□□ -0.37
PRKCH-222ENST00000556778 PPLO60437 1756 aa12.71□□□□□ -0.38
PRKCH-222ENST00000556778 SAFB2Q14151 953 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRKCH-222ENST00000556778 ASXL1Q8IXJ9 1541 aa12.7□□□□□ -0.38
PRKCH-222ENST00000556778 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
PRKCH-222ENST00000556778 DIP2AQ14689 1571 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 TOM1O60784 492 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
PRKCH-222ENST00000556778 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
PRKCH-222ENST00000556778 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
PRKCH-222ENST00000556778 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
PRKCH-222ENST00000556778 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
PRKCH-222ENST00000556778 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
PRKCH-222ENST00000556778 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
PRKCH-222ENST00000556778 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
PRKCH-222ENST00000556778 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
PRKCH-222ENST00000556778 IQSEC2Q5JU85 1478 aa12.66□□□□□ -0.38
PRKCH-222ENST00000556778 MSH6P52701 1360 aa12.66□□□□□ -0.38
PRKCH-222ENST00000556778 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
PRKCH-222ENST00000556778 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
PRKCH-222ENST00000556778 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
PRKCH-222ENST00000556778 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
PRKCH-222ENST00000556778 ATF3P18847 181 aa12.64□□□□□ -0.39
PRKCH-222ENST00000556778 HSPA1LP34931 641 aa12.64□□□□□ -0.39
PRKCH-222ENST00000556778 HIRIP3Q9BW71 556 aaPredicted RBP12.64□□□□□ -0.39
PRKCH-222ENST00000556778 POGKQ9P215 609 aa12.64□□□□□ -0.39
PRKCH-222ENST00000556778 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
PRKCH-222ENST00000556778 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
PRKCH-222ENST00000556778 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
PRKCH-222ENST00000556778 TECPR2O15040 1411 aa12.62□□□□□ -0.39
PRKCH-222ENST00000556778 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
PRKCH-222ENST00000556778 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
PRKCH-222ENST00000556778 DDX17Q92841 729 aaKnown RBP12.62□□□□□ -0.39
PRKCH-222ENST00000556778 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-222ENST00000556778 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
PRKCH-222ENST00000556778 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
PRKCH-222ENST00000556778 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
PRKCH-222ENST00000556778 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
PRKCH-222ENST00000556778 ADGRL3Q9HAR2 1447 aa12.6□□□□□ -0.39
PRKCH-222ENST00000556778 CLSPNQ9HAW4 1339 aa12.6□□□□□ -0.39
PRKCH-222ENST00000556778 BRINP3Q76B58 766 aa12.59□□□□□ -0.39
PRKCH-222ENST00000556778 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
PRKCH-222ENST00000556778 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
PRKCH-222ENST00000556778 MST1RQ04912 1400 aa12.58□□□□□ -0.4
PRKCH-222ENST00000556778 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
PRKCH-222ENST00000556778 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
PRKCH-222ENST00000556778 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-222ENST00000556778 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
PRKCH-222ENST00000556778 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
PRKCH-222ENST00000556778 C1orf167Q5SNV9 1468 aa12.54□□□□□ -0.4
PRKCH-222ENST00000556778 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
PRKCH-222ENST00000556778 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-222ENST00000556778 XPCQ01831 940 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-222ENST00000556778 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
PRKCH-222ENST00000556778 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
PRKCH-222ENST00000556778 DCCP43146 1447 aa12.54□□□□□ -0.4
PRKCH-222ENST00000556778 CENPJQ9HC77 1338 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-222ENST00000556778 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
PRKCH-222ENST00000556778 LAMC1P11047 1609 aa12.52□□□□□ -0.4
PRKCH-222ENST00000556778 NALCNQ8IZF0 1738 aa12.52□□□□□ -0.41
PRKCH-222ENST00000556778 FOXO3O43524 673 aa12.52□□□□□ -0.41
PRKCH-222ENST00000556778 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
PRKCH-222ENST00000556778 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
PRKCH-222ENST00000556778 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
PRKCH-222ENST00000556778 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
PRKCH-222ENST00000556778 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
PRKCH-222ENST00000556778 TRPM1Q7Z4N2 1603 aa12.5□□□□□ -0.41
PRKCH-222ENST00000556778 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
PRKCH-222ENST00000556778 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
PRKCH-222ENST00000556778 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
PRKCH-222ENST00000556778 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
PRKCH-222ENST00000556778 TESK2Q96S53 571 aa12.47□□□□□ -0.41
PRKCH-222ENST00000556778 KIAA1210Q9ULL0 1709 aa12.47□□□□□ -0.41
PRKCH-222ENST00000556778 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
PRKCH-222ENST00000556778 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-222ENST00000556778 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
PRKCH-222ENST00000556778 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
PRKCH-222ENST00000556778 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
PRKCH-222ENST00000556778 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-222ENST00000556778 PSME1Q06323 249 aa12.44□□□□□ -0.42
PRKCH-222ENST00000556778 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
PRKCH-222ENST00000556778 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
PRKCH-222ENST00000556778 USP47Q96K76 1375 aa12.43□□□□□ -0.42
PRKCH-222ENST00000556778 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms