RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 SLIT2O94813 1529 aa7□□□□□ -1.29
ATXN3-242ENST00000556644 EHBP1L1Q8N3D4 1523 aa7□□□□□ -1.29
ATXN3-242ENST00000556644 ADGRL3Q9HAR2 1447 aa7□□□□□ -1.29
ATXN3-242ENST00000556644 MYO5BQ9ULV0 1848 aa6.99□□□□□ -1.29
ATXN3-242ENST00000556644 TNS1Q9HBL0 1735 aaKnown RBP6.99□□□□□ -1.29
ATXN3-242ENST00000556644 EEA1Q15075 1411 aa6.99□□□□□ -1.29
ATXN3-242ENST00000556644 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
ATXN3-242ENST00000556644 CHGAP10645 457 aaKnown RBP6.98□□□□□ -1.29
ATXN3-242ENST00000556644 FAM98CQ17RN3 349 aaKnown RBP6.98□□□□□ -1.29
ATXN3-242ENST00000556644 CAMKK2Q96RR4 588 aa6.98□□□□□ -1.29
ATXN3-242ENST00000556644 DISP2A7MBM2 1401 aa6.98□□□□□ -1.29
ATXN3-242ENST00000556644 NOS1P29475 1434 aa6.98□□□□□ -1.29
ATXN3-242ENST00000556644 NALCNQ8IZF0 1738 aa6.98□□□□□ -1.29
ATXN3-242ENST00000556644 PIK3R4Q99570 1358 aa6.97□□□□□ -1.29
ATXN3-242ENST00000556644 TRIM37O94972 964 aa6.97□□□□□ -1.29
ATXN3-242ENST00000556644 ARHGEF5Q12774 1597 aa6.97□□□□□ -1.29
ATXN3-242ENST00000556644 VPS72Q15906 364 aa6.97□□□□□ -1.29
ATXN3-242ENST00000556644 LAMC1P11047 1609 aa6.97□□□□□ -1.29
ATXN3-242ENST00000556644 GCC2Q8IWJ2 1684 aa6.96□□□□□ -1.29
ATXN3-242ENST00000556644 XRN1Q8IZH2 1706 aaKnown RBP6.96□□□□□ -1.29
ATXN3-242ENST00000556644 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-242ENST00000556644 MYOM1P52179 1685 aa6.96□□□□□ -1.3
ATXN3-242ENST00000556644 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.3
ATXN3-242ENST00000556644 CHD4Q14839 1912 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 ADGRB2O60241 1585 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 ONECUT3O60422 494 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-242ENST00000556644 APBA3O96018 575 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 NBPF8Q3BBV2 869 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 COL13A1Q5TAT6 717 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-242ENST00000556644 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 NBPF14Q5TI25 921 aa6.95□□□□□ -1.3
ATXN3-242ENST00000556644 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
ATXN3-242ENST00000556644 ZBTB7AO95365 584 aa6.94□□□□□ -1.3
ATXN3-242ENST00000556644 HDGFP51858 240 aaKnown RBP6.94□□□□□ -1.3
ATXN3-242ENST00000556644 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-242ENST00000556644 PDGFDQ9GZP0 370 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-242ENST00000556644 SLC52A1Q9NWF4 448 aa6.94□□□□□ -1.3
ATXN3-242ENST00000556644 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
ATXN3-242ENST00000556644 KANK1Q14678 1352 aa6.94□□□□□ -1.3
ATXN3-242ENST00000556644 USP32Q8NFA0 1604 aa6.94□□□□□ -1.3
ATXN3-242ENST00000556644 PLCH1Q4KWH8 1693 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 RREB1Q92766 1687 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 PXDNQ92626 1479 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 HSPA6P17066 643 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 HAP1P54257 671 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-242ENST00000556644 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-242ENST00000556644 TMEM131LA2VDJ0 1609 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 KIF15Q9NS87 1388 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 SHANK3Q9BYB0 1731 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 CEP162Q5TB80 1403 aa6.93□□□□□ -1.3
ATXN3-242ENST00000556644 FOXO3O43524 673 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 PRELPP51888 382 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 SYT17Q9BSW7 474 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 RRP7BPQ9NSQ0 103 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 ATF5Q9Y2D1 282 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-242ENST00000556644 METP08581 1390 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 ADGRL2O95490 1459 aa6.92□□□□□ -1.3
ATXN3-242ENST00000556644 PTPN23Q9H3S7 1636 aa6.91□□□□□ -1.3
ATXN3-242ENST00000556644 ESCO1Q5FWF5 840 aa6.91□□□□□ -1.3
ATXN3-242ENST00000556644 PELP1Q8IZL8 1130 aaKnown RBP6.91□□□□□ -1.3
ATXN3-242ENST00000556644 NPHP3Q7Z494 1330 aa6.91□□□□□ -1.3
ATXN3-242ENST00000556644 PARD3Q8TEW0 1356 aa6.91□□□□□ -1.3
ATXN3-242ENST00000556644 LMTK2Q8IWU2 1503 aa6.91□□□□□ -1.3
ATXN3-242ENST00000556644 NRXN3Q9Y4C0 1643 aa6.9□□□□□ -1.3
ATXN3-242ENST00000556644 FAM83GA6ND36 823 aa6.9□□□□□ -1.3
ATXN3-242ENST00000556644 PTGER2P43116 358 aa6.9□□□□□ -1.3
ATXN3-242ENST00000556644 GPR162Q16538 588 aa6.9□□□□□ -1.3
ATXN3-242ENST00000556644 ANO8Q9HCE9 1232 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-242ENST00000556644 ERBINQ96RT1 1412 aa6.9□□□□□ -1.31
ATXN3-242ENST00000556644 NUTM2FA1L443 756 aa6.89□□□□□ -1.31
ATXN3-242ENST00000556644 DLC1Q96QB1 1528 aa6.89□□□□□ -1.31
ATXN3-242ENST00000556644 CASZ1Q86V15 1759 aa6.88□□□□□ -1.31
ATXN3-242ENST00000556644 NWD2Q9ULI1 1742 aa6.88□□□□□ -1.31
ATXN3-242ENST00000556644 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-242ENST00000556644 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
ATXN3-242ENST00000556644 ATP10DQ9P241 1426 aa6.87□□□□□ -1.31
ATXN3-242ENST00000556644 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
ATXN3-242ENST00000556644 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
ATXN3-242ENST00000556644 NRAPQ86VF7 1730 aa6.87□□□□□ -1.31
ATXN3-242ENST00000556644 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
ATXN3-242ENST00000556644 ROBO2Q9HCK4 1378 aa6.86□□□□□ -1.31
ATXN3-242ENST00000556644 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
ATXN3-242ENST00000556644 BTG4Q9NY30 223 aa6.86□□□□□ -1.31
ATXN3-242ENST00000556644 LMOD2Q6P5Q4 547 aa6.85□□□□□ -1.31
ATXN3-242ENST00000556644 SPATA31A5Q5VU36 1347 aa6.84□□□□□ -1.31
ATXN3-242ENST00000556644 SPATA31A7Q8IWB4 1347 aa6.84□□□□□ -1.31
ATXN3-242ENST00000556644 GPBP1L1Q9HC44 474 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-242ENST00000556644 ABCA3Q99758 1704 aa6.84□□□□□ -1.31
ATXN3-242ENST00000556644 BCL11BQ9C0K0 894 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-242ENST00000556644 TNS3Q68CZ2 1445 aa6.83□□□□□ -1.32
ATXN3-242ENST00000556644 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
ATXN3-242ENST00000556644 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
ATXN3-242ENST00000556644 DNAJC5GQ8N7S2 189 aa6.82□□□□□ -1.32
ATXN3-242ENST00000556644 ARXQ96QS3 562 aa6.82□□□□□ -1.32
ATXN3-242ENST00000556644 CHIC2Q9UKJ5 165 aa6.82□□□□□ -1.32
ATXN3-242ENST00000556644 WWC3Q9ULE0 1092 aa6.82□□□□□ -1.32
ATXN3-242ENST00000556644 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 APLP1P51693 650 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms