RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CFHP08603 1231 aa9.69□□□□□ -0.86
CPSF2-205ENST00000556622 URB2Q14146 1524 aaKnown RBP9.69□□□□□ -0.86
CPSF2-205ENST00000556622 HIC1Q14526 733 aa9.69□□□□□ -0.86
CPSF2-205ENST00000556622 BCANQ96GW7 911 aa9.69□□□□□ -0.86
CPSF2-205ENST00000556622 PRDM2Q13029 1718 aa9.68□□□□□ -0.86
CPSF2-205ENST00000556622 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
CPSF2-205ENST00000556622 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
CPSF2-205ENST00000556622 WIPF1O43516 503 aa9.67□□□□□ -0.86
CPSF2-205ENST00000556622 DNAJB2P25686 324 aa9.67□□□□□ -0.86
CPSF2-205ENST00000556622 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
CPSF2-205ENST00000556622 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
CPSF2-205ENST00000556622 AVPP01185 164 aa9.66□□□□□ -0.86
CPSF2-205ENST00000556622 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
CPSF2-205ENST00000556622 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
CPSF2-205ENST00000556622 GNPATO15228 680 aa9.65□□□□□ -0.86
CPSF2-205ENST00000556622 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CPSF2-205ENST00000556622 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
CPSF2-205ENST00000556622 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.86
CPSF2-205ENST00000556622 AXIN1O15169 862 aa9.64□□□□□ -0.87
CPSF2-205ENST00000556622 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
CPSF2-205ENST00000556622 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
CPSF2-205ENST00000556622 NR1I2O75469 434 aa9.63□□□□□ -0.87
CPSF2-205ENST00000556622 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
CPSF2-205ENST00000556622 HRCP23327 699 aa9.61□□□□□ -0.87
CPSF2-205ENST00000556622 INSM1Q01101 510 aaPredicted RBP9.61□□□□□ -0.87
CPSF2-205ENST00000556622 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
CPSF2-205ENST00000556622 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
CPSF2-205ENST00000556622 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
CPSF2-205ENST00000556622 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
CPSF2-205ENST00000556622 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
CPSF2-205ENST00000556622 SNRPBP14678 240 aaKnown RBP9.59□□□□□ -0.87
CPSF2-205ENST00000556622 FECHP22830 423 aa9.59□□□□□ -0.87
CPSF2-205ENST00000556622 CYP4X1Q8N118 509 aa9.59□□□□□ -0.87
CPSF2-205ENST00000556622 SOGA1O94964 1423 aa9.58□□□□□ -0.88
CPSF2-205ENST00000556622 ZMYND10O75800 440 aa9.58□□□□□ -0.88
CPSF2-205ENST00000556622 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
CPSF2-205ENST00000556622 ZC3H15Q8WU90 426 aaKnown RBP9.58□□□□□ -0.88
CPSF2-205ENST00000556622 LOC100996750A0A140TA64 210 aa9.57□□□□□ -0.88
CPSF2-205ENST00000556622 OATP04181 439 aa9.57□□□□□ -0.88
CPSF2-205ENST00000556622 ZEB1P37275 1124 aaPredicted RBP9.57□□□□□ -0.88
CPSF2-205ENST00000556622 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
CPSF2-205ENST00000556622 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
CPSF2-205ENST00000556622 SPSB2Q99619 263 aa9.57□□□□□ -0.88
CPSF2-205ENST00000556622 KRTAP4-6Q9BYQ5 205 aa9.57□□□□□ -0.88
CPSF2-205ENST00000556622 RPIAP49247 311 aa9.56□□□□□ -0.88
CPSF2-205ENST00000556622 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
CPSF2-205ENST00000556622 FCF1Q9Y324 198 aaKnown RBP9.56□□□□□ -0.88
CPSF2-205ENST00000556622 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
CPSF2-205ENST00000556622 MINK1Q8N4C8 1332 aaPredicted RBP9.56□□□□□ -0.88
CPSF2-205ENST00000556622 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
CPSF2-205ENST00000556622 MAP2K5Q13163 448 aa9.55□□□□□ -0.88
CPSF2-205ENST00000556622 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
CPSF2-205ENST00000556622 AQRO60306 1485 aaKnown RBP eCLIP9.54□□□□□ -0.88
CPSF2-205ENST00000556622 POLA1P09884 1462 aaPredicted RBP9.54□□□□□ -0.88
CPSF2-205ENST00000556622 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
CPSF2-205ENST00000556622 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
CPSF2-205ENST00000556622 IRF6O14896 467 aa9.54□□□□□ -0.88
CPSF2-205ENST00000556622 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
CPSF2-205ENST00000556622 CUX1P39880 1505 aa9.53□□□□□ -0.88
CPSF2-205ENST00000556622 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
CPSF2-205ENST00000556622 ATP13A2Q9NQ11 1180 aa9.53□□□□□ -0.88
CPSF2-205ENST00000556622 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
CPSF2-205ENST00000556622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
CPSF2-205ENST00000556622 CD2BP2O95400 341 aaKnown RBP9.51□□□□□ -0.89
CPSF2-205ENST00000556622 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
CPSF2-205ENST00000556622 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
CPSF2-205ENST00000556622 SMPD1P17405 629 aa9.5□□□□□ -0.89
CPSF2-205ENST00000556622 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
CPSF2-205ENST00000556622 PRDM9Q9NQV7 894 aa9.5□□□□□ -0.89
CPSF2-205ENST00000556622 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
CPSF2-205ENST00000556622 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
CPSF2-205ENST00000556622 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
CPSF2-205ENST00000556622 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
CPSF2-205ENST00000556622 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
CPSF2-205ENST00000556622 PHOX2BQ99453 314 aa9.48□□□□□ -0.89
CPSF2-205ENST00000556622 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
CPSF2-205ENST00000556622 J3QL48 77 aa9.45□□□□□ -0.9
CPSF2-205ENST00000556622 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
CPSF2-205ENST00000556622 MORN1Q5T089 497 aa9.45□□□□□ -0.9
CPSF2-205ENST00000556622 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
CPSF2-205ENST00000556622 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
CPSF2-205ENST00000556622 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
CPSF2-205ENST00000556622 GAPVD1Q14C86 1478 aa9.43□□□□□ -0.9
CPSF2-205ENST00000556622 SNIP1Q8TAD8 396 aaKnown RBP9.43□□□□□ -0.9
CPSF2-205ENST00000556622 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
CPSF2-205ENST00000556622 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
CPSF2-205ENST00000556622 FUT2Q10981 343 aa9.42□□□□□ -0.9
CPSF2-205ENST00000556622 HPS1Q92902 700 aa9.42□□□□□ -0.9
CPSF2-205ENST00000556622 ABCA10Q8WWZ4 1543 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 WNT7AO00755 349 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
CPSF2-205ENST00000556622 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
CPSF2-205ENST00000556622 GMPRP36959 345 aa9.4□□□□□ -0.9
CPSF2-205ENST00000556622 AMHR2Q16671 573 aa9.4□□□□□ -0.9
CPSF2-205ENST00000556622 AK7Q96M32 723 aa9.4□□□□□ -0.9
CPSF2-205ENST00000556622 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.91
CPSF2-205ENST00000556622 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms