RNA–Protein interactions for RNA: ENST00000556547.5

CASC1-212, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 820 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-212ENST00000556547 LSM11P83369 360 aaKnown RBP eCLIP8.83□□□□□ -1
CASC1-212ENST00000556547 ADGRD1Q6QNK2 874 aa8.83□□□□□ -1
CASC1-212ENST00000556547 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
CASC1-212ENST00000556547 STAC3Q96MF2 364 aa8.83□□□□□ -1
CASC1-212ENST00000556547 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
CASC1-212ENST00000556547 PCDH10Q9P2E7 1040 aa8.83□□□□□ -1
CASC1-212ENST00000556547 NDUFB9Q9Y6M9 179 aa8.83□□□□□ -1
CASC1-212ENST00000556547 C6orf229H3BNL8 230 aa8.82□□□□□ -1
CASC1-212ENST00000556547 Q3C1V9 767 aa8.82□□□□□ -1
CASC1-212ENST00000556547 CCDC82Q8N4S0 544 aa8.82□□□□□ -1
CASC1-212ENST00000556547 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
CASC1-212ENST00000556547 PCDHGC3Q9UN70 934 aa8.82□□□□□ -1
CASC1-212ENST00000556547 ZNF330Q9Y3S2 320 aaPredicted RBP8.82□□□□□ -1
CASC1-212ENST00000556547 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
CASC1-212ENST00000556547 ANKK1Q8NFD2 765 aa8.81□□□□□ -1
CASC1-212ENST00000556547 GDPD2Q9HCC8 539 aa8.81□□□□□ -1
CASC1-212ENST00000556547 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
CASC1-212ENST00000556547 GUCA2AQ02747 115 aa8.8□□□□□ -1
CASC1-212ENST00000556547 ABL2P42684 1182 aa8.79□□□□□ -1
CASC1-212ENST00000556547 RETREG3Q86VR2 466 aa8.79□□□□□ -1
CASC1-212ENST00000556547 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
CASC1-212ENST00000556547 HRO43593 1189 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 WASHC4Q2M389 1173 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 MORN1Q5T089 497 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
CASC1-212ENST00000556547 DESI1Q6ICB0 168 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 PNMA1Q8ND90 353 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 TSC1Q92574 1164 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 HLA-CQ95604 372 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
CASC1-212ENST00000556547 SOWAHBA6NEL2 793 aa8.75□□□□□ -1.01
CASC1-212ENST00000556547 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
CASC1-212ENST00000556547 PPP4CP60510 307 aa8.75□□□□□ -1.01
CASC1-212ENST00000556547 CTDSPL2Q05D32 466 aa8.75□□□□□ -1.01
CASC1-212ENST00000556547 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
CASC1-212ENST00000556547 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
CASC1-212ENST00000556547 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
CASC1-212ENST00000556547 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
CASC1-212ENST00000556547 POTEB3A0JP26 581 aa8.72□□□□□ -1.01
CASC1-212ENST00000556547 NR1I2O75469 434 aa8.72□□□□□ -1.01
CASC1-212ENST00000556547 POTEBQ6S5H4 581 aa8.72□□□□□ -1.01
CASC1-212ENST00000556547 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
CASC1-212ENST00000556547 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
CASC1-212ENST00000556547 SLC27A5Q9Y2P5 690 aa8.72□□□□□ -1.01
CASC1-212ENST00000556547 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.02
CASC1-212ENST00000556547 WNT2BQ93097 391 aa8.71□□□□□ -1.02
CASC1-212ENST00000556547 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
CASC1-212ENST00000556547 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
CASC1-212ENST00000556547 SOX11P35716 441 aa8.7□□□□□ -1.02
CASC1-212ENST00000556547 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
CASC1-212ENST00000556547 LRRN4Q8WUT4 740 aa8.7□□□□□ -1.02
CASC1-212ENST00000556547 GLMNQ92990 594 aa8.7□□□□□ -1.02
CASC1-212ENST00000556547 USB1Q9BQ65 265 aaKnown RBP8.7□□□□□ -1.02
CASC1-212ENST00000556547 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
CASC1-212ENST00000556547 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
CASC1-212ENST00000556547 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
CASC1-212ENST00000556547 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
CASC1-212ENST00000556547 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
CASC1-212ENST00000556547 BCAMP50895 628 aa8.67□□□□□ -1.02
CASC1-212ENST00000556547 IRF5Q13568 498 aa8.67□□□□□ -1.02
CASC1-212ENST00000556547 LYPD8Q6UX82 237 aa8.67□□□□□ -1.02
CASC1-212ENST00000556547 ZC3H4Q9UPT8 1303 aaKnown RBP8.66□□□□□ -1.02
CASC1-212ENST00000556547 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
CASC1-212ENST00000556547 APLP1P51693 650 aa8.66□□□□□ -1.02
CASC1-212ENST00000556547 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
CASC1-212ENST00000556547 PTPRNQ16849 979 aa8.65□□□□□ -1.02
CASC1-212ENST00000556547 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 GPR37L1O60883 481 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 JUNDP17535 347 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 NR6A1Q15406 480 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 BLOC1S3Q6QNY0 202 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 RNF19BQ6ZMZ0 732 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
CASC1-212ENST00000556547 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
CASC1-212ENST00000556547 PDE4CQ08493 712 aa8.63□□□□□ -1.03
CASC1-212ENST00000556547 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
CASC1-212ENST00000556547 EIF4G2P78344 907 aaKnown RBP eCLIP8.62□□□□□ -1.03
CASC1-212ENST00000556547 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
CASC1-212ENST00000556547 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
CASC1-212ENST00000556547 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
CASC1-212ENST00000556547 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
CASC1-212ENST00000556547 CDAN1Q8IWY9 1227 aa8.61□□□□□ -1.03
CASC1-212ENST00000556547 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
CASC1-212ENST00000556547 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
CASC1-212ENST00000556547 WBP1LQ9NX94 342 aa8.6□□□□□ -1.03
CASC1-212ENST00000556547 FKBPLQ9UIM3 349 aa8.6□□□□□ -1.03
CASC1-212ENST00000556547 F12P00748 615 aaPredicted RBP8.59□□□□□ -1.03
CASC1-212ENST00000556547 NR1H3Q13133 447 aa8.59□□□□□ -1.03
CASC1-212ENST00000556547 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
CASC1-212ENST00000556547 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
CASC1-212ENST00000556547 SPSB2Q99619 263 aa8.59□□□□□ -1.03
CASC1-212ENST00000556547 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
CASC1-212ENST00000556547 DXOO77932 396 aaKnown RBP8.58□□□□□ -1.04
CASC1-212ENST00000556547 CCNYL3P0C7X3 344 aa8.58□□□□□ -1.04
CASC1-212ENST00000556547 PBXIP1Q96AQ6 731 aa8.58□□□□□ -1.04
CASC1-212ENST00000556547 ALG2Q9H553 416 aa8.58□□□□□ -1.04
CASC1-212ENST00000556547 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
CASC1-212ENST00000556547 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
CASC1-212ENST00000556547 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms