RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
NRXN3-213ENST00000556496 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
NRXN3-213ENST00000556496 ANKRD36BQ8N2N9 1353 aa13.85□□□□□ -0.19
NRXN3-213ENST00000556496 ARHGEF28Q8N1W1 1705 aaKnown RBP13.85□□□□□ -0.19
NRXN3-213ENST00000556496 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
NRXN3-213ENST00000556496 PREX1Q8TCU6 1659 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 E9PSI1 815 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 MTHFSP49914 203 aa13.84□□□□□ -0.19
NRXN3-213ENST00000556496 TMEM131LA2VDJ0 1609 aa13.83□□□□□ -0.2
NRXN3-213ENST00000556496 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
NRXN3-213ENST00000556496 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
NRXN3-213ENST00000556496 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
NRXN3-213ENST00000556496 PRAM1Q96QH2 718 aa13.82□□□□□ -0.2
NRXN3-213ENST00000556496 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
NRXN3-213ENST00000556496 POGKQ9P215 609 aa13.82□□□□□ -0.2
NRXN3-213ENST00000556496 NKTRP30414 1462 aaKnown RBP13.82□□□□□ -0.2
NRXN3-213ENST00000556496 MINK1Q8N4C8 1332 aaPredicted RBP13.81□□□□□ -0.2
NRXN3-213ENST00000556496 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
NRXN3-213ENST00000556496 MYO5BQ9ULV0 1848 aa13.81□□□□□ -0.2
NRXN3-213ENST00000556496 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
NRXN3-213ENST00000556496 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 RUNDC1Q96C34 613 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 NSD2O96028 1365 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
NRXN3-213ENST00000556496 MLECQ14165 292 aa13.8□□□□□ -0.2
NRXN3-213ENST00000556496 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
NRXN3-213ENST00000556496 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
NRXN3-213ENST00000556496 PTPRMP28827 1452 aa13.79□□□□□ -0.2
NRXN3-213ENST00000556496 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
NRXN3-213ENST00000556496 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
NRXN3-213ENST00000556496 BCAR3O75815 825 aa13.78□□□□□ -0.2
NRXN3-213ENST00000556496 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
NRXN3-213ENST00000556496 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.2
NRXN3-213ENST00000556496 AGLP35573 1532 aa13.77□□□□□ -0.2
NRXN3-213ENST00000556496 SHPRHQ149N8 1683 aa13.77□□□□□ -0.2
NRXN3-213ENST00000556496 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.21
NRXN3-213ENST00000556496 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
NRXN3-213ENST00000556496 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
NRXN3-213ENST00000556496 MS4A1P11836 297 aa13.76□□□□□ -0.21
NRXN3-213ENST00000556496 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
NRXN3-213ENST00000556496 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
NRXN3-213ENST00000556496 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
NRXN3-213ENST00000556496 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
NRXN3-213ENST00000556496 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
NRXN3-213ENST00000556496 PDE4AP27815 886 aa13.75□□□□□ -0.21
NRXN3-213ENST00000556496 CDK19Q9BWU1 502 aa13.75□□□□□ -0.21
NRXN3-213ENST00000556496 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
NRXN3-213ENST00000556496 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
NRXN3-213ENST00000556496 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
NRXN3-213ENST00000556496 FYB1O15117 783 aa13.73□□□□□ -0.21
NRXN3-213ENST00000556496 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
NRXN3-213ENST00000556496 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
NRXN3-213ENST00000556496 CLTCQ00610 1675 aaKnown RBP13.73□□□□□ -0.21
NRXN3-213ENST00000556496 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
NRXN3-213ENST00000556496 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
NRXN3-213ENST00000556496 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
NRXN3-213ENST00000556496 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
NRXN3-213ENST00000556496 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
NRXN3-213ENST00000556496 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
NRXN3-213ENST00000556496 WDR63Q8IWG1 891 aa13.72□□□□□ -0.21
NRXN3-213ENST00000556496 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
NRXN3-213ENST00000556496 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
NRXN3-213ENST00000556496 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
NRXN3-213ENST00000556496 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
NRXN3-213ENST00000556496 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.21
NRXN3-213ENST00000556496 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.22
NRXN3-213ENST00000556496 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
NRXN3-213ENST00000556496 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
NRXN3-213ENST00000556496 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
NRXN3-213ENST00000556496 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
NRXN3-213ENST00000556496 PDE3AQ14432 1141 aa13.7□□□□□ -0.22
NRXN3-213ENST00000556496 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
NRXN3-213ENST00000556496 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
NRXN3-213ENST00000556496 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
NRXN3-213ENST00000556496 RARSP54136 660 aaKnown RBP13.68□□□□□ -0.22
NRXN3-213ENST00000556496 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
NRXN3-213ENST00000556496 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
NRXN3-213ENST00000556496 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
NRXN3-213ENST00000556496 MED14O60244 1454 aa13.67□□□□□ -0.22
NRXN3-213ENST00000556496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
NRXN3-213ENST00000556496 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
NRXN3-213ENST00000556496 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
NRXN3-213ENST00000556496 COG6Q9Y2V7 657 aa13.66□□□□□ -0.22
NRXN3-213ENST00000556496 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
NRXN3-213ENST00000556496 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
NRXN3-213ENST00000556496 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
NRXN3-213ENST00000556496 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
NRXN3-213ENST00000556496 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
NRXN3-213ENST00000556496 METP08581 1390 aa13.64□□□□□ -0.23
NRXN3-213ENST00000556496 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
NRXN3-213ENST00000556496 TMPOP42166 694 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms