RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ST8SIA5O15466 376 aa7.97□□□□□ -1.13
ATXN3-240ENST00000556339 CD46P15529 392 aa7.97□□□□□ -1.13
ATXN3-240ENST00000556339 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
ATXN3-240ENST00000556339 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-240ENST00000556339 TTC24A2A3L6 582 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-240ENST00000556339 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-240ENST00000556339 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
ATXN3-240ENST00000556339 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
ATXN3-240ENST00000556339 USB1Q9BQ65 265 aaKnown RBP7.95□□□□□ -1.14
ATXN3-240ENST00000556339 RB1CC1Q8TDY2 1594 aa7.94□□□□□ -1.14
ATXN3-240ENST00000556339 USP46P62068 366 aa7.94□□□□□ -1.14
ATXN3-240ENST00000556339 AAASQ9NRG9 546 aa7.94□□□□□ -1.14
ATXN3-240ENST00000556339 CLCN1P35523 988 aa7.93□□□□□ -1.14
ATXN3-240ENST00000556339 GPCPD1Q9NPB8 672 aa7.93□□□□□ -1.14
ATXN3-240ENST00000556339 AXIN1O15169 862 aa7.92□□□□□ -1.14
ATXN3-240ENST00000556339 TRIM32Q13049 653 aa7.92□□□□□ -1.14
ATXN3-240ENST00000556339 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
ATXN3-240ENST00000556339 POTECB2RU33 542 aa7.91□□□□□ -1.14
ATXN3-240ENST00000556339 HLA-CQ95604 372 aa7.91□□□□□ -1.14
ATXN3-240ENST00000556339 TOR4AQ9NXH8 423 aa7.91□□□□□ -1.14
ATXN3-240ENST00000556339 HOXA2O43364 376 aa7.9□□□□□ -1.14
ATXN3-240ENST00000556339 MMP16P51512 607 aa7.9□□□□□ -1.14
ATXN3-240ENST00000556339 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
ATXN3-240ENST00000556339 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
ATXN3-240ENST00000556339 WNT7AO00755 349 aa7.88□□□□□ -1.15
ATXN3-240ENST00000556339 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
ATXN3-240ENST00000556339 SNIP1Q8TAD8 396 aaKnown RBP7.88□□□□□ -1.15
ATXN3-240ENST00000556339 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
ATXN3-240ENST00000556339 FAM217BQ9NTX9 383 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-240ENST00000556339 C11orf95C9JLR9 678 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-240ENST00000556339 AVPP01185 164 aa7.87□□□□□ -1.15
ATXN3-240ENST00000556339 CRIPAKQ8N1N5 446 aa7.87□□□□□ -1.15
ATXN3-240ENST00000556339 NACADO15069 1562 aa7.87□□□□□ -1.15
ATXN3-240ENST00000556339 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-240ENST00000556339 MRGPRX2Q96LB1 330 aa7.86□□□□□ -1.15
ATXN3-240ENST00000556339 C6orf229H3BNL8 230 aa7.85□□□□□ -1.15
ATXN3-240ENST00000556339 SYMPKQ92797 1274 aaKnown RBP7.85□□□□□ -1.15
ATXN3-240ENST00000556339 DACH1Q9UI36 760 aa7.85□□□□□ -1.15
ATXN3-240ENST00000556339 FDX1P10109 184 aa7.84□□□□□ -1.15
ATXN3-240ENST00000556339 JUNDP17535 347 aa7.84□□□□□ -1.15
ATXN3-240ENST00000556339 NUDT12Q9BQG2 462 aa7.84□□□□□ -1.15
ATXN3-240ENST00000556339 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
ATXN3-240ENST00000556339 WNT7BP56706 349 aa7.83□□□□□ -1.16
ATXN3-240ENST00000556339 RC3H1Q5TC82 1133 aaKnown RBP7.83□□□□□ -1.16
ATXN3-240ENST00000556339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN3-240ENST00000556339 RETREG3Q86VR2 466 aa7.83□□□□□ -1.16
ATXN3-240ENST00000556339 J3QL48 77 aa7.82□□□□□ -1.16
ATXN3-240ENST00000556339 SMPD1P17405 629 aa7.82□□□□□ -1.16
ATXN3-240ENST00000556339 SSTR3P32745 418 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-240ENST00000556339 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-240ENST00000556339 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
ATXN3-240ENST00000556339 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
ATXN3-240ENST00000556339 MS4A1P11836 297 aa7.79□□□□□ -1.16
ATXN3-240ENST00000556339 SKOR1P84550 965 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 HPS1Q92902 700 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 SENP2Q9HC62 589 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 ATP13A2Q9NQ11 1180 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
ATXN3-240ENST00000556339 CCNYL3P0C7X3 344 aa7.77□□□□□ -1.17
ATXN3-240ENST00000556339 GIGYF2Q6Y7W6 1299 aaKnown RBP7.77□□□□□ -1.17
ATXN3-240ENST00000556339 SPIRE2Q8WWL2 714 aa7.77□□□□□ -1.17
ATXN3-240ENST00000556339 WFS1O76024 890 aa7.76□□□□□ -1.17
ATXN3-240ENST00000556339 NDUFV2P19404 249 aa7.76□□□□□ -1.17
ATXN3-240ENST00000556339 BARGINQ6ZT62 677 aa7.76□□□□□ -1.17
ATXN3-240ENST00000556339 PCDHGC3Q9UN70 934 aa7.76□□□□□ -1.17
ATXN3-240ENST00000556339 MOXD2PA6NHM9 499 aa7.75□□□□□ -1.17
ATXN3-240ENST00000556339 MTMR2Q13614 643 aa7.75□□□□□ -1.17
ATXN3-240ENST00000556339 ZMYND10O75800 440 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 AMHR2Q16671 573 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 PTPRNQ16849 979 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 LINC01559Q495D7 138 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 PTCRAQ6ISU1 281 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-240ENST00000556339 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 ZC3H15Q8WU90 426 aaKnown RBP7.74□□□□□ -1.17
ATXN3-240ENST00000556339 KIFC2Q96AC6 838 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 BEGAINQ9BUH8 593 aa7.74□□□□□ -1.17
ATXN3-240ENST00000556339 SPDYE5A6NIY4 337 aa7.73□□□□□ -1.17
ATXN3-240ENST00000556339 SNRPBP14678 240 aaKnown RBP7.73□□□□□ -1.17
ATXN3-240ENST00000556339 DIXDC1Q155Q3 683 aa7.73□□□□□ -1.17
ATXN3-240ENST00000556339 TRIM47Q96LD4 638 aa7.73□□□□□ -1.17
ATXN3-240ENST00000556339 UNC93B1Q9H1C4 597 aa7.73□□□□□ -1.17
ATXN3-240ENST00000556339 CTHP32929 405 aa7.72□□□□□ -1.17
ATXN3-240ENST00000556339 SH3BP2P78314 561 aa7.71□□□□□ -1.18
ATXN3-240ENST00000556339 UNC13AQ9UPW8 1703 aa7.71□□□□□ -1.18
ATXN3-240ENST00000556339 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-240ENST00000556339 KCNH2Q12809 1159 aa7.7□□□□□ -1.18
ATXN3-240ENST00000556339 BAP1Q92560 729 aa7.7□□□□□ -1.18
ATXN3-240ENST00000556339 TBC1D2Q9BYX2 928 aa7.7□□□□□ -1.18
ATXN3-240ENST00000556339 EVA1BQ9NVM1 165 aa7.7□□□□□ -1.18
ATXN3-240ENST00000556339 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
ATXN3-240ENST00000556339 TSC1Q92574 1164 aa7.69□□□□□ -1.18
ATXN3-240ENST00000556339 PLEKHG3A1L390 1219 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 SIAH2O43255 324 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 BMP1P13497 986 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
ATXN3-240ENST00000556339 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 PARP9Q8IXQ6 854 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 ZNF511Q8NB15 262 aa7.68□□□□□ -1.18
ATXN3-240ENST00000556339 ZBTB3Q9H5J0 574 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms