RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 ABCC11Q96J66 1382 aa14.17□□□□□ -0.14
MTHFD1-213ENST00000556284 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
MTHFD1-213ENST00000556284 YTHDC2Q9H6S0 1430 aaKnown RBP14.16□□□□□ -0.14
MTHFD1-213ENST00000556284 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
MTHFD1-213ENST00000556284 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
MTHFD1-213ENST00000556284 SIRT1Q96EB6 747 aa14.16□□□□□ -0.14
MTHFD1-213ENST00000556284 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
MTHFD1-213ENST00000556284 KCNA6P17658 529 aa14.15□□□□□ -0.14
MTHFD1-213ENST00000556284 STK26Q9P289 416 aa14.15□□□□□ -0.14
MTHFD1-213ENST00000556284 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
MTHFD1-213ENST00000556284 AMOTL2Q9Y2J4 779 aa14.15□□□□□ -0.14
MTHFD1-213ENST00000556284 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
MTHFD1-213ENST00000556284 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
MTHFD1-213ENST00000556284 USP47Q96K76 1375 aa14.14□□□□□ -0.15
MTHFD1-213ENST00000556284 SETD1AO15047 1707 aaKnown RBP14.14□□□□□ -0.15
MTHFD1-213ENST00000556284 TECPR2O15040 1411 aa14.13□□□□□ -0.15
MTHFD1-213ENST00000556284 PTPRUQ92729 1446 aa14.13□□□□□ -0.15
MTHFD1-213ENST00000556284 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
MTHFD1-213ENST00000556284 ST20-MTHFSA0A0A6YYL1 179 aa14.11□□□□□ -0.15
MTHFD1-213ENST00000556284 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
MTHFD1-213ENST00000556284 POGKQ9P215 609 aa14.11□□□□□ -0.15
MTHFD1-213ENST00000556284 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
MTHFD1-213ENST00000556284 FAM135BQ49AJ0 1406 aa14.1□□□□□ -0.15
MTHFD1-213ENST00000556284 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
MTHFD1-213ENST00000556284 PRAM1Q96QH2 718 aa14.09□□□□□ -0.15
MTHFD1-213ENST00000556284 ROBO2Q9HCK4 1378 aa14.09□□□□□ -0.15
MTHFD1-213ENST00000556284 PTCH1Q13635 1447 aa14.08□□□□□ -0.15
MTHFD1-213ENST00000556284 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
MTHFD1-213ENST00000556284 SBNO2Q9Y2G9 1366 aa14.07□□□□□ -0.16
MTHFD1-213ENST00000556284 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 CPS1P31327 1500 aa14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 TESK2Q96S53 571 aa14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 XRN1Q8IZH2 1706 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 NKTRP30414 1462 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-213ENST00000556284 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
MTHFD1-213ENST00000556284 KNDC1Q76NI1 1749 aa14.05□□□□□ -0.16
MTHFD1-213ENST00000556284 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-213ENST00000556284 ZNF335Q9H4Z2 1342 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-213ENST00000556284 PLEKHH1Q9ULM0 1364 aa14.05□□□□□ -0.16
MTHFD1-213ENST00000556284 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
MTHFD1-213ENST00000556284 TMF1P82094 1093 aa14.03□□□□□ -0.16
MTHFD1-213ENST00000556284 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
MTHFD1-213ENST00000556284 ARHGEF28Q8N1W1 1705 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-213ENST00000556284 ZNF316A6NFI3 1004 aaPredicted RBP14.02□□□□□ -0.17
MTHFD1-213ENST00000556284 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
MTHFD1-213ENST00000556284 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
MTHFD1-213ENST00000556284 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-213ENST00000556284 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
MTHFD1-213ENST00000556284 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-213ENST00000556284 PUS7Q96PZ0 661 aaKnown RBP14.01□□□□□ -0.17
MTHFD1-213ENST00000556284 TMEM94Q12767 1356 aa13.99□□□□□ -0.17
MTHFD1-213ENST00000556284 WASLO00401 505 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-213ENST00000556284 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
MTHFD1-213ENST00000556284 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
MTHFD1-213ENST00000556284 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
MTHFD1-213ENST00000556284 RBM33Q96EV2 1170 aaKnown RBP13.98□□□□□ -0.17
MTHFD1-213ENST00000556284 CDK19Q9BWU1 502 aa13.98□□□□□ -0.17
MTHFD1-213ENST00000556284 STRCP1A6NGW2 1772 aa13.97□□□□□ -0.17
MTHFD1-213ENST00000556284 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
MTHFD1-213ENST00000556284 C11orf95C9JLR9 678 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-213ENST00000556284 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
MTHFD1-213ENST00000556284 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
MTHFD1-213ENST00000556284 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
MTHFD1-213ENST00000556284 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
MTHFD1-213ENST00000556284 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-213ENST00000556284 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-213ENST00000556284 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
MTHFD1-213ENST00000556284 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
MTHFD1-213ENST00000556284 MSH6P52701 1360 aa13.94□□□□□ -0.18
MTHFD1-213ENST00000556284 CCDC7Q96M83 1385 aa13.94□□□□□ -0.18
MTHFD1-213ENST00000556284 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 ADGRB2O60241 1585 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 ATF3P18847 181 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 CADPS2Q86UW7 1296 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
MTHFD1-213ENST00000556284 DCCP43146 1447 aa13.92□□□□□ -0.18
MTHFD1-213ENST00000556284 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
MTHFD1-213ENST00000556284 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
MTHFD1-213ENST00000556284 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
MTHFD1-213ENST00000556284 CCDC61Q9Y6R9 512 aa13.91□□□□□ -0.18
MTHFD1-213ENST00000556284 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
MTHFD1-213ENST00000556284 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.19
MTHFD1-213ENST00000556284 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
MTHFD1-213ENST00000556284 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
MTHFD1-213ENST00000556284 PRR36Q9H6K5 1346 aa13.88□□□□□ -0.19
MTHFD1-213ENST00000556284 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
MTHFD1-213ENST00000556284 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
MTHFD1-213ENST00000556284 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
MTHFD1-213ENST00000556284 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
MTHFD1-213ENST00000556284 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
MTHFD1-213ENST00000556284 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
MTHFD1-213ENST00000556284 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
MTHFD1-213ENST00000556284 ATP7BP35670 1465 aa13.86□□□□□ -0.19
MTHFD1-213ENST00000556284 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 MIER1Q8N108 512 aa13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms