RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
PSEN1-215ENST00000556011 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
PSEN1-215ENST00000556011 MYOM2P54296 1465 aa13.74□□□□□ -0.21
PSEN1-215ENST00000556011 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
PSEN1-215ENST00000556011 VPS72Q15906 364 aa13.71□□□□□ -0.21
PSEN1-215ENST00000556011 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
PSEN1-215ENST00000556011 MST1RQ04912 1400 aa13.71□□□□□ -0.22
PSEN1-215ENST00000556011 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.22
PSEN1-215ENST00000556011 ARXQ96QS3 562 aa13.7□□□□□ -0.22
PSEN1-215ENST00000556011 TMEM131LA2VDJ0 1609 aa13.7□□□□□ -0.22
PSEN1-215ENST00000556011 INO80Q9ULG1 1556 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-215ENST00000556011 CACNA1AO00555 2505 aa13.68□□□□□ -0.22
PSEN1-215ENST00000556011 YBX3P16989 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
PSEN1-215ENST00000556011 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
PSEN1-215ENST00000556011 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-215ENST00000556011 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
PSEN1-215ENST00000556011 CROCC2H7BZ55 1655 aa13.67□□□□□ -0.22
PSEN1-215ENST00000556011 GRIN3BO60391 1043 aa13.67□□□□□ -0.22
PSEN1-215ENST00000556011 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
PSEN1-215ENST00000556011 BCANQ96GW7 911 aa13.66□□□□□ -0.22
PSEN1-215ENST00000556011 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-215ENST00000556011 KIF3BO15066 747 aa13.63□□□□□ -0.23
PSEN1-215ENST00000556011 FOXN1O15353 648 aa13.63□□□□□ -0.23
PSEN1-215ENST00000556011 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
PSEN1-215ENST00000556011 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
PSEN1-215ENST00000556011 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
PSEN1-215ENST00000556011 LAMC1P11047 1609 aa13.61□□□□□ -0.23
PSEN1-215ENST00000556011 DCCP43146 1447 aa13.6□□□□□ -0.23
PSEN1-215ENST00000556011 MTFR1LQ9H019 292 aa13.6□□□□□ -0.23
PSEN1-215ENST00000556011 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
PSEN1-215ENST00000556011 ABCC5O15440 1437 aa13.58□□□□□ -0.24
PSEN1-215ENST00000556011 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
PSEN1-215ENST00000556011 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
PSEN1-215ENST00000556011 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
PSEN1-215ENST00000556011 NLGN2Q8NFZ4 835 aa13.57□□□□□ -0.24
PSEN1-215ENST00000556011 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
PSEN1-215ENST00000556011 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
PSEN1-215ENST00000556011 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
PSEN1-215ENST00000556011 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
PSEN1-215ENST00000556011 RBM46Q8TBY0 533 aaKnown RBP13.54□□□□□ -0.24
PSEN1-215ENST00000556011 CHGAP10645 457 aaKnown RBP13.53□□□□□ -0.24
PSEN1-215ENST00000556011 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-215ENST00000556011 ADGRB3O60242 1522 aa13.53□□□□□ -0.24
PSEN1-215ENST00000556011 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
PSEN1-215ENST00000556011 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.25
PSEN1-215ENST00000556011 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
PSEN1-215ENST00000556011 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
PSEN1-215ENST00000556011 CTCFP49711 727 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-215ENST00000556011 FSTL1Q12841 308 aa13.49□□□□□ -0.25
PSEN1-215ENST00000556011 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
PSEN1-215ENST00000556011 LBX1P52954 281 aa13.48□□□□□ -0.25
PSEN1-215ENST00000556011 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
PSEN1-215ENST00000556011 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
PSEN1-215ENST00000556011 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
PSEN1-215ENST00000556011 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
PSEN1-215ENST00000556011 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-215ENST00000556011 ORAI2Q96SN7 254 aa13.46□□□□□ -0.25
PSEN1-215ENST00000556011 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
PSEN1-215ENST00000556011 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.26
PSEN1-215ENST00000556011 HABP4Q5JVS0 413 aaKnown RBP13.44□□□□□ -0.26
PSEN1-215ENST00000556011 C1orf167Q5SNV9 1468 aa13.43□□□□□ -0.26
PSEN1-215ENST00000556011 RPRD2Q5VT52 1461 aaKnown RBP13.43□□□□□ -0.26
PSEN1-215ENST00000556011 COL6A3P12111 3177 aa13.43□□□□□ -0.26
PSEN1-215ENST00000556011 NOS1P29475 1434 aa13.43□□□□□ -0.26
PSEN1-215ENST00000556011 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-215ENST00000556011 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
PSEN1-215ENST00000556011 TRPM2O94759 1503 aa13.42□□□□□ -0.26
PSEN1-215ENST00000556011 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
PSEN1-215ENST00000556011 TULP4Q9NRJ4 1543 aa13.4□□□□□ -0.26
PSEN1-215ENST00000556011 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-215ENST00000556011 RGPD3A6NKT7 1758 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-215ENST00000556011 RGPD4Q7Z3J3 1758 aa13.4□□□□□ -0.26
PSEN1-215ENST00000556011 CLIP1P30622 1438 aa13.39□□□□□ -0.27
PSEN1-215ENST00000556011 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
PSEN1-215ENST00000556011 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
PSEN1-215ENST00000556011 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 AIDAQ96BJ3 306 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 GCC1Q96CN9 775 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-215ENST00000556011 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
PSEN1-215ENST00000556011 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
PSEN1-215ENST00000556011 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-215ENST00000556011 CEP152O94986 1710 aa13.36□□□□□ -0.27
PSEN1-215ENST00000556011 PROM2Q8N271 834 aa13.35□□□□□ -0.27
PSEN1-215ENST00000556011 FXR1P51114 621 aaKnown RBP eCLIP13.34□□□□□ -0.27
PSEN1-215ENST00000556011 PXDNQ92626 1479 aa13.34□□□□□ -0.27
PSEN1-215ENST00000556011 PTPRUQ92729 1446 aa13.33□□□□□ -0.28
PSEN1-215ENST00000556011 PLSCR1O15162 318 aa13.33□□□□□ -0.28
PSEN1-215ENST00000556011 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
PSEN1-215ENST00000556011 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
PSEN1-215ENST00000556011 IDI1Q13907 227 aa13.32□□□□□ -0.28
PSEN1-215ENST00000556011 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
PSEN1-215ENST00000556011 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
PSEN1-215ENST00000556011 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
PSEN1-215ENST00000556011 HSPA8P11142 646 aaKnown RBP13.3□□□□□ -0.28
PSEN1-215ENST00000556011 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-215ENST00000556011 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
PSEN1-215ENST00000556011 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms