RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 TRIM26Q12899 539 aaPredicted RBP5.76□□□□□ -1.49
LINC00648-202ENST00000555985 SIRT1Q96EB6 747 aa5.76□□□□□ -1.49
LINC00648-202ENST00000555985 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
LINC00648-202ENST00000555985 SHPRHQ149N8 1683 aa5.76□□□□□ -1.49
LINC00648-202ENST00000555985 YTHDC2Q9H6S0 1430 aaKnown RBP5.75□□□□□ -1.49
LINC00648-202ENST00000555985 C1QBPQ07021 282 aaKnown RBP5.75□□□□□ -1.49
LINC00648-202ENST00000555985 TOPAZ1Q8N9V7 1692 aa5.75□□□□□ -1.49
LINC00648-202ENST00000555985 AMOTL2Q9Y2J4 779 aa5.75□□□□□ -1.49
LINC00648-202ENST00000555985 PHLPP1O60346 1717 aa5.75□□□□□ -1.49
LINC00648-202ENST00000555985 CHGAP10645 457 aaKnown RBP5.74□□□□□ -1.49
LINC00648-202ENST00000555985 COL22A1Q8NFW1 1626 aaPredicted RBP5.74□□□□□ -1.49
LINC00648-202ENST00000555985 ZNF326Q5BKZ1 582 aaKnown RBP5.74□□□□□ -1.49
LINC00648-202ENST00000555985 RTN4Q9NQC3 1192 aaKnown RBP5.74□□□□□ -1.49
LINC00648-202ENST00000555985 PPP1R15AO75807 674 aaPredicted RBP5.73□□□□□ -1.49
LINC00648-202ENST00000555985 RGPD8O14715 1765 aaPredicted RBP5.73□□□□□ -1.49
LINC00648-202ENST00000555985 KIF1AQ12756 1690 aa5.73□□□□□ -1.49
LINC00648-202ENST00000555985 MSH6P52701 1360 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 PLEKHH1Q9ULM0 1364 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 CRYBG1Q9Y4K1 1723 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 MED1Q15648 1581 aaPredicted RBP5.72□□□□□ -1.49
LINC00648-202ENST00000555985 UBAP1LF5GYI3 381 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 PROSER2Q86WR7 435 aaPredicted RBP5.72□□□□□ -1.49
LINC00648-202ENST00000555985 TRPM3Q9HCF6 1732 aaPredicted RBP5.72□□□□□ -1.49
LINC00648-202ENST00000555985 C1orf167Q5SNV9 1468 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 TOM1O60784 492 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 ZEB1P37275 1124 aaPredicted RBP5.72□□□□□ -1.49
LINC00648-202ENST00000555985 C19orf44Q9H6X5 657 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 GPRASP1Q5JY77 1395 aa5.72□□□□□ -1.49
LINC00648-202ENST00000555985 PXDNQ92626 1479 aa5.71□□□□□ -1.5
LINC00648-202ENST00000555985 QRICH2Q9H0J4 1663 aa5.71□□□□□ -1.5
LINC00648-202ENST00000555985 RGL3Q3MIN7 710 aa5.71□□□□□ -1.5
LINC00648-202ENST00000555985 ABCA3Q99758 1704 aa5.71□□□□□ -1.5
LINC00648-202ENST00000555985 HSPA1LP34931 641 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 CFAP70Q5T0N1 1121 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 RBM33Q96EV2 1170 aaKnown RBP5.7□□□□□ -1.5
LINC00648-202ENST00000555985 ITSN1Q15811 1721 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 SLAIN2Q9P270 581 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 ALS2Q96Q42 1657 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 MARF1Q9Y4F3 1742 aaKnown RBP5.7□□□□□ -1.5
LINC00648-202ENST00000555985 RALGAPBQ86X10 1494 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 TULP4Q9NRJ4 1543 aa5.7□□□□□ -1.5
LINC00648-202ENST00000555985 SAMD1Q6SPF0 538 aaPredicted RBP5.69□□□□□ -1.5
LINC00648-202ENST00000555985 ANKARQ7Z5J8 1434 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 ATXN8OSP0DMR3 200 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 TMEM132EQ6IEE7 984 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 BRINP3Q76B58 766 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 CADPS2Q86UW7 1296 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 DCAF11Q8TEB1 546 aa5.69□□□□□ -1.5
LINC00648-202ENST00000555985 ATP7BP35670 1465 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 L3MBTL2Q969R5 705 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 SIN3AQ96ST3 1273 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 CLSPNQ9HAW4 1339 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 LRP6O75581 1613 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 USP54Q70EL1 1684 aa5.68□□□□□ -1.5
LINC00648-202ENST00000555985 NRKQ7Z2Y5 1582 aa5.67□□□□□ -1.5
LINC00648-202ENST00000555985 BCANQ96GW7 911 aa5.67□□□□□ -1.5
LINC00648-202ENST00000555985 AKAP12Q02952 1782 aa5.67□□□□□ -1.5
LINC00648-202ENST00000555985 NEUROD1Q13562 356 aa5.67□□□□□ -1.5
LINC00648-202ENST00000555985 WAPLQ7Z5K2 1190 aa5.67□□□□□ -1.5
LINC00648-202ENST00000555985 SOS2Q07890 1332 aaPredicted RBP5.67□□□□□ -1.5
LINC00648-202ENST00000555985 NBPF8Q3BBV2 869 aa5.66□□□□□ -1.5
LINC00648-202ENST00000555985 NBPF1Q3BBV0 1214 aa5.66□□□□□ -1.5
LINC00648-202ENST00000555985 SBNO2Q9Y2G9 1366 aa5.66□□□□□ -1.5
LINC00648-202ENST00000555985 PIP4K2BP78356 416 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 AMER1Q5JTC6 1135 aaPredicted RBP5.65□□□□□ -1.5
LINC00648-202ENST00000555985 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.65□□□□□ -1.5
LINC00648-202ENST00000555985 GTF3C3Q9Y5Q9 886 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 PNPLA6Q8IY17 1366 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 PRR36Q9H6K5 1346 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 ATF3P18847 181 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 PRAM1Q96QH2 718 aa5.65□□□□□ -1.5
LINC00648-202ENST00000555985 MON2Q7Z3U7 1717 aa5.65□□□□□ -1.51
LINC00648-202ENST00000555985 POLR3AO14802 1390 aaPredicted RBP5.65□□□□□ -1.51
LINC00648-202ENST00000555985 JCADQ9P266 1359 aa5.65□□□□□ -1.51
LINC00648-202ENST00000555985 DAXXQ9UER7 740 aaPredicted RBP5.65□□□□□ -1.51
LINC00648-202ENST00000555985 PHRF1Q9P1Y6 1649 aaKnown RBP5.64□□□□□ -1.51
LINC00648-202ENST00000555985 KDM2AQ9Y2K7 1162 aa5.64□□□□□ -1.51
LINC00648-202ENST00000555985 ORAI2Q96SN7 254 aa5.64□□□□□ -1.51
LINC00648-202ENST00000555985 STK26Q9P289 416 aa5.64□□□□□ -1.51
LINC00648-202ENST00000555985 NRAPQ86VF7 1730 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 SSH2Q76I76 1423 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 RGS17Q9UGC6 210 aaPredicted RBP5.63□□□□□ -1.51
LINC00648-202ENST00000555985 TIMELESSQ9UNS1 1208 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 MYOM1P52179 1685 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 SBNO1A3KN83 1393 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 EIF3AQ14152 1382 aaKnown RBP5.63□□□□□ -1.51
LINC00648-202ENST00000555985 SPATA31A6Q5VVP1 1343 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 CD163L1Q9NR16 1453 aa5.63□□□□□ -1.51
LINC00648-202ENST00000555985 NWD2Q9ULI1 1742 aa5.62□□□□□ -1.51
LINC00648-202ENST00000555985 PLCH1Q4KWH8 1693 aa5.62□□□□□ -1.51
LINC00648-202ENST00000555985 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
LINC00648-202ENST00000555985 PIK3C2AO00443 1686 aa5.62□□□□□ -1.51
LINC00648-202ENST00000555985 TRAK1Q9UPV9 953 aa5.62□□□□□ -1.51
LINC00648-202ENST00000555985 TNS3Q68CZ2 1445 aa5.61□□□□□ -1.51
LINC00648-202ENST00000555985 LMO7Q8WWI1 1683 aa5.61□□□□□ -1.51
LINC00648-202ENST00000555985 DDX17Q92841 729 aaKnown RBP5.61□□□□□ -1.51
LINC00648-202ENST00000555985 ROCK2O75116 1388 aaKnown RBP5.61□□□□□ -1.51
LINC00648-202ENST00000555985 CPSF1Q10570 1443 aaKnown RBP5.61□□□□□ -1.51
LINC00648-202ENST00000555985 SLIT3O75094 1523 aa5.61□□□□□ -1.51
LINC00648-202ENST00000555985 PLEKHG3A1L390 1219 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms