RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
PCNX4-211ENST00000555929 KCNA6P17658 529 aa10.72□□□□□ -0.69
PCNX4-211ENST00000555929 SAFB2Q14151 953 aaKnown RBP eCLIP10.72□□□□□ -0.69
PCNX4-211ENST00000555929 RBM33Q96EV2 1170 aaKnown RBP10.72□□□□□ -0.69
PCNX4-211ENST00000555929 POGKQ9P215 609 aa10.72□□□□□ -0.69
PCNX4-211ENST00000555929 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
PCNX4-211ENST00000555929 ALKQ9UM73 1620 aa10.72□□□□□ -0.69
PCNX4-211ENST00000555929 PROSER2Q86WR7 435 aaPredicted RBP10.71□□□□□ -0.69
PCNX4-211ENST00000555929 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
PCNX4-211ENST00000555929 IFT172Q9UG01 1749 aa10.7□□□□□ -0.7
PCNX4-211ENST00000555929 IQGAP1P46940 1657 aa10.7□□□□□ -0.7
PCNX4-211ENST00000555929 SETBP1Q9Y6X0 1596 aa10.7□□□□□ -0.7
PCNX4-211ENST00000555929 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
PCNX4-211ENST00000555929 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
PCNX4-211ENST00000555929 YTHDC2Q9H6S0 1430 aaKnown RBP10.69□□□□□ -0.7
PCNX4-211ENST00000555929 WAPLQ7Z5K2 1190 aa10.69□□□□□ -0.7
PCNX4-211ENST00000555929 PRAM1Q96QH2 718 aa10.69□□□□□ -0.7
PCNX4-211ENST00000555929 PTPRUQ92729 1446 aa10.68□□□□□ -0.7
PCNX4-211ENST00000555929 LRPPRCP42704 1394 aaKnown RBP10.68□□□□□ -0.7
PCNX4-211ENST00000555929 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
PCNX4-211ENST00000555929 NRXN3Q9Y4C0 1643 aa10.68□□□□□ -0.7
PCNX4-211ENST00000555929 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
PCNX4-211ENST00000555929 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
PCNX4-211ENST00000555929 ABCC11Q96J66 1382 aa10.66□□□□□ -0.7
PCNX4-211ENST00000555929 DIP2AQ14689 1571 aa10.66□□□□□ -0.7
PCNX4-211ENST00000555929 ST20-MTHFSA0A0A6YYL1 179 aa10.66□□□□□ -0.7
PCNX4-211ENST00000555929 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCNX4-211ENST00000555929 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.7
PCNX4-211ENST00000555929 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
PCNX4-211ENST00000555929 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
PCNX4-211ENST00000555929 HSPA5P11021 654 aaKnown RBP10.65□□□□□ -0.7
PCNX4-211ENST00000555929 ADGRB1O14514 1584 aa10.65□□□□□ -0.71
PCNX4-211ENST00000555929 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
PCNX4-211ENST00000555929 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.71
PCNX4-211ENST00000555929 USP47Q96K76 1375 aa10.65□□□□□ -0.71
PCNX4-211ENST00000555929 PLEKHH1Q9ULM0 1364 aa10.65□□□□□ -0.71
PCNX4-211ENST00000555929 ASXL1Q8IXJ9 1541 aa10.64□□□□□ -0.71
PCNX4-211ENST00000555929 TRPM1Q7Z4N2 1603 aa10.64□□□□□ -0.71
PCNX4-211ENST00000555929 LAMC1P11047 1609 aa10.63□□□□□ -0.71
PCNX4-211ENST00000555929 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
PCNX4-211ENST00000555929 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
PCNX4-211ENST00000555929 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
PCNX4-211ENST00000555929 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
PCNX4-211ENST00000555929 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
PCNX4-211ENST00000555929 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
PCNX4-211ENST00000555929 KIAA1210Q9ULL0 1709 aa10.61□□□□□ -0.71
PCNX4-211ENST00000555929 PTCH1Q13635 1447 aa10.6□□□□□ -0.71
PCNX4-211ENST00000555929 ATF3P18847 181 aa10.6□□□□□ -0.71
PCNX4-211ENST00000555929 SRPK2P78362 688 aaKnown RBP10.6□□□□□ -0.71
PCNX4-211ENST00000555929 SETD1AO15047 1707 aaKnown RBP10.6□□□□□ -0.71
PCNX4-211ENST00000555929 TECPR2O15040 1411 aa10.59□□□□□ -0.71
PCNX4-211ENST00000555929 FAM135BQ49AJ0 1406 aa10.59□□□□□ -0.71
PCNX4-211ENST00000555929 CDK19Q9BWU1 502 aa10.59□□□□□ -0.71
PCNX4-211ENST00000555929 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
PCNX4-211ENST00000555929 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
PCNX4-211ENST00000555929 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 MSH6P52701 1360 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 GABBR2O75899 941 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 TMF1P82094 1093 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
PCNX4-211ENST00000555929 CPS1P31327 1500 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 DLC1Q96QB1 1528 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
PCNX4-211ENST00000555929 NWD1Q149M9 1564 aa10.57□□□□□ -0.72
PCNX4-211ENST00000555929 WASLO00401 505 aaPredicted RBP10.57□□□□□ -0.72
PCNX4-211ENST00000555929 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
PCNX4-211ENST00000555929 TESK2Q96S53 571 aa10.57□□□□□ -0.72
PCNX4-211ENST00000555929 XRN1Q8IZH2 1706 aaKnown RBP10.57□□□□□ -0.72
PCNX4-211ENST00000555929 SLC24A1O60721 1099 aa10.56□□□□□ -0.72
PCNX4-211ENST00000555929 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
PCNX4-211ENST00000555929 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
PCNX4-211ENST00000555929 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
PCNX4-211ENST00000555929 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
PCNX4-211ENST00000555929 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
PCNX4-211ENST00000555929 TMC1Q8TDI8 760 aa10.55□□□□□ -0.72
PCNX4-211ENST00000555929 ADGRL3Q9HAR2 1447 aa10.55□□□□□ -0.72
PCNX4-211ENST00000555929 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
PCNX4-211ENST00000555929 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
PCNX4-211ENST00000555929 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
PCNX4-211ENST00000555929 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
PCNX4-211ENST00000555929 NCOA3Q9Y6Q9 1424 aa10.54□□□□□ -0.72
PCNX4-211ENST00000555929 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
PCNX4-211ENST00000555929 TOM1O60784 492 aa10.53□□□□□ -0.72
PCNX4-211ENST00000555929 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
PCNX4-211ENST00000555929 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
PCNX4-211ENST00000555929 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
PCNX4-211ENST00000555929 PMFBP1Q8TBY8 1022 aa10.52□□□□□ -0.73
PCNX4-211ENST00000555929 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
PCNX4-211ENST00000555929 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.52□□□□□ -0.73
PCNX4-211ENST00000555929 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
PCNX4-211ENST00000555929 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
PCNX4-211ENST00000555929 SBNO2Q9Y2G9 1366 aa10.51□□□□□ -0.73
PCNX4-211ENST00000555929 CLCN6P51797 869 aa10.5□□□□□ -0.73
PCNX4-211ENST00000555929 NGDNQ8NEJ9 315 aaKnown RBP10.5□□□□□ -0.73
PCNX4-211ENST00000555929 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
PCNX4-211ENST00000555929 KIF7Q2M1P5 1343 aa10.5□□□□□ -0.73
PCNX4-211ENST00000555929 PRR36Q9H6K5 1346 aa10.5□□□□□ -0.73
PCNX4-211ENST00000555929 QRICH2Q9H0J4 1663 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms