RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 DLC1Q96QB1 1528 aa11.08□□□□□ -0.64
PCNX4-210ENST00000555740 ADGRF5Q8IZF2 1346 aa11.07□□□□□ -0.64
PCNX4-210ENST00000555740 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCNX4-210ENST00000555740 CPS1P31327 1500 aa11.07□□□□□ -0.64
PCNX4-210ENST00000555740 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
PCNX4-210ENST00000555740 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
PCNX4-210ENST00000555740 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
PCNX4-210ENST00000555740 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
PCNX4-210ENST00000555740 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
PCNX4-210ENST00000555740 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
PCNX4-210ENST00000555740 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
PCNX4-210ENST00000555740 LMTK3Q96Q04 1460 aa11.05□□□□□ -0.64
PCNX4-210ENST00000555740 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
PCNX4-210ENST00000555740 USP47Q96K76 1375 aa11.05□□□□□ -0.64
PCNX4-210ENST00000555740 C14orf93Q9H972 538 aaKnown RBP11.04□□□□□ -0.64
PCNX4-210ENST00000555740 TECPR2O15040 1411 aa11.04□□□□□ -0.64
PCNX4-210ENST00000555740 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
PCNX4-210ENST00000555740 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
PCNX4-210ENST00000555740 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.64
PCNX4-210ENST00000555740 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
PCNX4-210ENST00000555740 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
PCNX4-210ENST00000555740 CHD2O14647 1828 aaKnown RBP11.01□□□□□ -0.65
PCNX4-210ENST00000555740 NBR1Q14596 966 aa11.01□□□□□ -0.65
PCNX4-210ENST00000555740 ADGRB2O60241 1585 aa11□□□□□ -0.65
PCNX4-210ENST00000555740 STRCQ7RTU9 1775 aa11□□□□□ -0.65
PCNX4-210ENST00000555740 PIK3R4Q99570 1358 aa11□□□□□ -0.65
PCNX4-210ENST00000555740 NUBP1P53384 320 aa11□□□□□ -0.65
PCNX4-210ENST00000555740 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
PCNX4-210ENST00000555740 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
PCNX4-210ENST00000555740 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
PCNX4-210ENST00000555740 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
PCNX4-210ENST00000555740 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
PCNX4-210ENST00000555740 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
PCNX4-210ENST00000555740 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
PCNX4-210ENST00000555740 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
PCNX4-210ENST00000555740 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
PCNX4-210ENST00000555740 HSPA5P11021 654 aaKnown RBP10.98□□□□□ -0.65
PCNX4-210ENST00000555740 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
PCNX4-210ENST00000555740 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
PCNX4-210ENST00000555740 LTKP29376 864 aa10.98□□□□□ -0.65
PCNX4-210ENST00000555740 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
PCNX4-210ENST00000555740 MYOM1P52179 1685 aa10.97□□□□□ -0.65
PCNX4-210ENST00000555740 EID1Q9Y6B2 187 aa10.97□□□□□ -0.65
PCNX4-210ENST00000555740 ABCC11Q96J66 1382 aa10.97□□□□□ -0.65
PCNX4-210ENST00000555740 PLEKHG5O94827 1062 aa10.96□□□□□ -0.66
PCNX4-210ENST00000555740 STK25O00506 426 aa10.95□□□□□ -0.66
PCNX4-210ENST00000555740 TXNDC2Q86VQ3 553 aa10.95□□□□□ -0.66
PCNX4-210ENST00000555740 METP08581 1390 aa10.95□□□□□ -0.66
PCNX4-210ENST00000555740 TULP4Q9NRJ4 1543 aa10.95□□□□□ -0.66
PCNX4-210ENST00000555740 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
PCNX4-210ENST00000555740 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
PCNX4-210ENST00000555740 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
PCNX4-210ENST00000555740 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
PCNX4-210ENST00000555740 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
PCNX4-210ENST00000555740 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
PCNX4-210ENST00000555740 NUTM2DQ5VT03 806 aaPredicted RBP10.93□□□□□ -0.66
PCNX4-210ENST00000555740 ANKLE2Q86XL3 938 aa10.93□□□□□ -0.66
PCNX4-210ENST00000555740 TESK2Q96S53 571 aa10.93□□□□□ -0.66
PCNX4-210ENST00000555740 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
PCNX4-210ENST00000555740 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
PCNX4-210ENST00000555740 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
PCNX4-210ENST00000555740 STRCP1A6NGW2 1772 aa10.91□□□□□ -0.66
PCNX4-210ENST00000555740 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
PCNX4-210ENST00000555740 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
PCNX4-210ENST00000555740 TULP1O00294 542 aaPredicted RBP10.91□□□□□ -0.66
PCNX4-210ENST00000555740 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
PCNX4-210ENST00000555740 CDC42BPGQ6DT37 1551 aa10.91□□□□□ -0.66
PCNX4-210ENST00000555740 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
PCNX4-210ENST00000555740 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
PCNX4-210ENST00000555740 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 ITSN1Q15811 1721 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 TMEM132EQ6IEE7 984 aa10.89□□□□□ -0.67
PCNX4-210ENST00000555740 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
PCNX4-210ENST00000555740 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
PCNX4-210ENST00000555740 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
PCNX4-210ENST00000555740 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
PCNX4-210ENST00000555740 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
PCNX4-210ENST00000555740 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
PCNX4-210ENST00000555740 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
PCNX4-210ENST00000555740 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
PCNX4-210ENST00000555740 PYGBP11216 843 aa10.86□□□□□ -0.67
PCNX4-210ENST00000555740 TMF1P82094 1093 aa10.86□□□□□ -0.67
PCNX4-210ENST00000555740 TRAK1Q9UPV9 953 aa10.86□□□□□ -0.67
PCNX4-210ENST00000555740 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 AKAP12Q02952 1782 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 NCOA3Q9Y6Q9 1424 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 GSE1Q14687 1217 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
PCNX4-210ENST00000555740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
PCNX4-210ENST00000555740 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
PCNX4-210ENST00000555740 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
PCNX4-210ENST00000555740 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
PCNX4-210ENST00000555740 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
PCNX4-210ENST00000555740 SLC26A8Q96RN1 970 aa10.84□□□□□ -0.67
PCNX4-210ENST00000555740 HIRIP3Q9BW71 556 aaPredicted RBP10.84□□□□□ -0.67
PCNX4-210ENST00000555740 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms