RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PLEKHG1Q9ULL1 1385 aa19.46■□□□□ 0.71
IFT43-209ENST00000555305 TECPR2O15040 1411 aa19.46■□□□□ 0.71
IFT43-209ENST00000555305 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
IFT43-209ENST00000555305 EID1Q9Y6B2 187 aa19.46■□□□□ 0.71
IFT43-209ENST00000555305 NRXN3Q9Y4C0 1643 aa19.46■□□□□ 0.71
IFT43-209ENST00000555305 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
IFT43-209ENST00000555305 SRPK2P78362 688 aaKnown RBP19.44■□□□□ 0.7
IFT43-209ENST00000555305 SLIT1O75093 1534 aa19.44■□□□□ 0.7
IFT43-209ENST00000555305 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
IFT43-209ENST00000555305 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
IFT43-209ENST00000555305 KNDC1Q76NI1 1749 aa19.43■□□□□ 0.7
IFT43-209ENST00000555305 THEMISQ8N1K5 641 aaPredicted RBP19.43■□□□□ 0.7
IFT43-209ENST00000555305 TERF2IPQ9NYB0 399 aa19.43■□□□□ 0.7
IFT43-209ENST00000555305 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
IFT43-209ENST00000555305 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
IFT43-209ENST00000555305 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
IFT43-209ENST00000555305 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
IFT43-209ENST00000555305 ARHGAP23Q9P227 1491 aa19.42■□□□□ 0.7
IFT43-209ENST00000555305 WDR43Q15061 677 aaKnown RBP eCLIP19.41■□□□□ 0.7
IFT43-209ENST00000555305 CABP2Q9NPB3 220 aa19.41■□□□□ 0.7
IFT43-209ENST00000555305 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
IFT43-209ENST00000555305 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
IFT43-209ENST00000555305 CPS1P31327 1500 aa19.4■□□□□ 0.7
IFT43-209ENST00000555305 BCANQ96GW7 911 aa19.39■□□□□ 0.7
IFT43-209ENST00000555305 METP08581 1390 aa19.39■□□□□ 0.69
IFT43-209ENST00000555305 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
IFT43-209ENST00000555305 CEBPAP49715 358 aaPredicted RBP19.38■□□□□ 0.69
IFT43-209ENST00000555305 MORC1Q86VD1 984 aa19.38■□□□□ 0.69
IFT43-209ENST00000555305 TXNDC2Q86VQ3 553 aa19.38■□□□□ 0.69
IFT43-209ENST00000555305 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
IFT43-209ENST00000555305 CDK19Q9BWU1 502 aa19.37■□□□□ 0.69
IFT43-209ENST00000555305 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
IFT43-209ENST00000555305 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
IFT43-209ENST00000555305 ADAMTS13Q76LX8 1427 aa19.36■□□□□ 0.69
IFT43-209ENST00000555305 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
IFT43-209ENST00000555305 MED14O60244 1454 aa19.35■□□□□ 0.69
IFT43-209ENST00000555305 NGEFQ8N5V2 710 aa19.35■□□□□ 0.69
IFT43-209ENST00000555305 ATP7BP35670 1465 aa19.35■□□□□ 0.69
IFT43-209ENST00000555305 FKBP8Q14318 412 aa19.34■□□□□ 0.69
IFT43-209ENST00000555305 A0A1W2PP64 1363 aa19.34■□□□□ 0.69
IFT43-209ENST00000555305 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
IFT43-209ENST00000555305 TBX22Q9Y458 520 aa19.33■□□□□ 0.68
IFT43-209ENST00000555305 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
IFT43-209ENST00000555305 LTKP29376 864 aa19.32■□□□□ 0.68
IFT43-209ENST00000555305 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
IFT43-209ENST00000555305 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
IFT43-209ENST00000555305 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
IFT43-209ENST00000555305 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
IFT43-209ENST00000555305 PLEKHH1Q9ULM0 1364 aa19.3■□□□□ 0.68
IFT43-209ENST00000555305 ADGRB2O60241 1585 aa19.29■□□□□ 0.68
IFT43-209ENST00000555305 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
IFT43-209ENST00000555305 ADAMTSL3P82987 1691 aa19.28■□□□□ 0.68
IFT43-209ENST00000555305 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
IFT43-209ENST00000555305 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
IFT43-209ENST00000555305 RIMS1Q86UR5 1692 aaKnown RBP19.27■□□□□ 0.68
IFT43-209ENST00000555305 CABP1Q9NZU7 370 aa19.27■□□□□ 0.67
IFT43-209ENST00000555305 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
IFT43-209ENST00000555305 CCDC61Q9Y6R9 512 aa19.25■□□□□ 0.67
IFT43-209ENST00000555305 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
IFT43-209ENST00000555305 ANKRD26Q9UPS8 1709 aa19.24■□□□□ 0.67
IFT43-209ENST00000555305 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
IFT43-209ENST00000555305 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
IFT43-209ENST00000555305 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
IFT43-209ENST00000555305 ZNF692Q9BU19 519 aaPredicted RBP19.23■□□□□ 0.67
IFT43-209ENST00000555305 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
IFT43-209ENST00000555305 FYB1O15117 783 aa19.21■□□□□ 0.67
IFT43-209ENST00000555305 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
IFT43-209ENST00000555305 MTHFSP49914 203 aa19.21■□□□□ 0.67
IFT43-209ENST00000555305 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
IFT43-209ENST00000555305 ANKLE2Q86XL3 938 aa19.21■□□□□ 0.67
IFT43-209ENST00000555305 CDC42BPGQ6DT37 1551 aa19.2■□□□□ 0.66
IFT43-209ENST00000555305 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
IFT43-209ENST00000555305 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
IFT43-209ENST00000555305 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
IFT43-209ENST00000555305 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
IFT43-209ENST00000555305 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
IFT43-209ENST00000555305 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
IFT43-209ENST00000555305 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
IFT43-209ENST00000555305 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
IFT43-209ENST00000555305 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
IFT43-209ENST00000555305 ZNF521Q96K83 1311 aa19.15■□□□□ 0.66
IFT43-209ENST00000555305 GOLGA2Q08379 1002 aa19.15■□□□□ 0.66
IFT43-209ENST00000555305 PLEKHG3A1L390 1219 aa19.14■□□□□ 0.66
IFT43-209ENST00000555305 RUNDC1Q96C34 613 aa19.14■□□□□ 0.66
IFT43-209ENST00000555305 SHPRHQ149N8 1683 aa19.14■□□□□ 0.65
IFT43-209ENST00000555305 PNNQ9H307 717 aaKnown RBP19.14■□□□□ 0.65
IFT43-209ENST00000555305 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
IFT43-209ENST00000555305 SALL2Q9Y467 1007 aaPredicted RBP19.14■□□□□ 0.65
IFT43-209ENST00000555305 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.13■□□□□ 0.65
IFT43-209ENST00000555305 PPP4R2Q9NY27 417 aa19.13■□□□□ 0.65
IFT43-209ENST00000555305 MON2Q7Z3U7 1717 aa19.12■□□□□ 0.65
IFT43-209ENST00000555305 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
IFT43-209ENST00000555305 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
IFT43-209ENST00000555305 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
IFT43-209ENST00000555305 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
IFT43-209ENST00000555305 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
IFT43-209ENST00000555305 APAF1O14727 1248 aa19.11■□□□□ 0.65
IFT43-209ENST00000555305 AKAP12Q02952 1782 aa19.1■□□□□ 0.65
IFT43-209ENST00000555305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.65
IFT43-209ENST00000555305 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms