RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-228ENST00000554592 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
ATXN3-228ENST00000554592 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-228ENST00000554592 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
ATXN3-228ENST00000554592 GCGRP47871 477 aa8.83□□□□□ -1
ATXN3-228ENST00000554592 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
ATXN3-228ENST00000554592 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
ATXN3-228ENST00000554592 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
ATXN3-228ENST00000554592 CD46P15529 392 aa8.82□□□□□ -1
ATXN3-228ENST00000554592 COPS2P61201 443 aa8.82□□□□□ -1
ATXN3-228ENST00000554592 ZPR1O75312 459 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 AMHR2Q16671 573 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 SULF1Q8IWU6 871 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 RDH13Q8NBN7 331 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
ATXN3-228ENST00000554592 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
ATXN3-228ENST00000554592 TRIM66O15016 1216 aa8.79□□□□□ -1
ATXN3-228ENST00000554592 CLCN1P35523 988 aa8.79□□□□□ -1
ATXN3-228ENST00000554592 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-228ENST00000554592 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-228ENST00000554592 FUT2Q10981 343 aa8.78□□□□□ -1
ATXN3-228ENST00000554592 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
ATXN3-228ENST00000554592 MORN1Q5T089 497 aa8.77□□□□□ -1.01
ATXN3-228ENST00000554592 AK7Q96M32 723 aa8.77□□□□□ -1.01
ATXN3-228ENST00000554592 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
ATXN3-228ENST00000554592 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-228ENST00000554592 RGS20O76081 388 aa8.76□□□□□ -1.01
ATXN3-228ENST00000554592 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
ATXN3-228ENST00000554592 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-228ENST00000554592 TLL1O43897 1013 aa8.75□□□□□ -1.01
ATXN3-228ENST00000554592 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
ATXN3-228ENST00000554592 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
ATXN3-228ENST00000554592 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-228ENST00000554592 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-228ENST00000554592 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-228ENST00000554592 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
ATXN3-228ENST00000554592 NR1I2O75469 434 aa8.73□□□□□ -1.01
ATXN3-228ENST00000554592 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
ATXN3-228ENST00000554592 IRX2Q9BZI1 471 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-228ENST00000554592 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
ATXN3-228ENST00000554592 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-228ENST00000554592 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-228ENST00000554592 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-228ENST00000554592 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
ATXN3-228ENST00000554592 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-228ENST00000554592 KDM4AO75164 1064 aa8.71□□□□□ -1.02
ATXN3-228ENST00000554592 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-228ENST00000554592 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
ATXN3-228ENST00000554592 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-228ENST00000554592 ADH1BP00325 375 aa8.7□□□□□ -1.02
ATXN3-228ENST00000554592 PDE4DQ08499 809 aa8.7□□□□□ -1.02
ATXN3-228ENST00000554592 MS4A1P11836 297 aa8.69□□□□□ -1.02
ATXN3-228ENST00000554592 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
ATXN3-228ENST00000554592 HLA-CQ95604 372 aa8.69□□□□□ -1.02
ATXN3-228ENST00000554592 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-228ENST00000554592 HOXA2O43364 376 aa8.68□□□□□ -1.02
ATXN3-228ENST00000554592 USP46P62068 366 aa8.68□□□□□ -1.02
ATXN3-228ENST00000554592 SPSB2Q99619 263 aa8.68□□□□□ -1.02
ATXN3-228ENST00000554592 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
ATXN3-228ENST00000554592 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
ATXN3-228ENST00000554592 S1PR4O95977 384 aa8.67□□□□□ -1.02
ATXN3-228ENST00000554592 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-228ENST00000554592 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-228ENST00000554592 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
ATXN3-228ENST00000554592 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
ATXN3-228ENST00000554592 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
ATXN3-228ENST00000554592 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
ATXN3-228ENST00000554592 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
ATXN3-228ENST00000554592 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
ATXN3-228ENST00000554592 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-228ENST00000554592 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-228ENST00000554592 FMNL1O95466 1100 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-228ENST00000554592 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
ATXN3-228ENST00000554592 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-228ENST00000554592 GGCXP38435 758 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
ATXN3-228ENST00000554592 MSS51Q4VC12 460 aa8.62□□□□□ -1.03
ATXN3-228ENST00000554592 NDUFV2P19404 249 aa8.61□□□□□ -1.03
ATXN3-228ENST00000554592 Q3C1V9 767 aa8.61□□□□□ -1.03
ATXN3-228ENST00000554592 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
ATXN3-228ENST00000554592 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
ATXN3-228ENST00000554592 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
ATXN3-228ENST00000554592 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-228ENST00000554592 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-228ENST00000554592 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
ATXN3-228ENST00000554592 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-228ENST00000554592 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
ATXN3-228ENST00000554592 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-228ENST00000554592 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
ATXN3-228ENST00000554592 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-228ENST00000554592 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-228ENST00000554592 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-228ENST00000554592 FDX1P10109 184 aa8.58□□□□□ -1.04
ATXN3-228ENST00000554592 MMP16P51512 607 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms