RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TAF3Q5VWG9 929 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 ZFP91Q96JP5 570 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 IPO9Q96P70 1041 aaKnown RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 COMMD10Q9Y6G5 202 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 WASHC4Q2M389 1173 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 ZNF354CQ86Y25 554 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 CABP2Q9NPB3 220 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 H3BQV1 296 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 IFFO2Q5TF58 517 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 VPS37CA5D8V6 355 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 LARP6Q9BRS8 491 aaKnown RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 MICAL3Q7RTP6 2002 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 FAM182BQ5T319 152 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 NOP9Q86U38 636 aaKnown RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 IFNLR1Q8IU57 520 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 ZNF771Q7L3S4 317 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 TAX1BP1Q86VP1 789 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 MYL6BP14649 208 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 HSP90AA2PQ14568 343 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 CRBNQ96SW2 442 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 FAM161AQ3B820 660 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 CENPHQ9H3R5 247 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 BIN2Q9UBW5 565 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 HDGFL2Q7Z4V5 671 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-212ENST00000554584 SORBS3O60504 671 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 FLIIQ13045 1269 aa4.03□□□□□ -1.76
SYNE2-212ENST00000554584 WAPLQ7Z5K2 1190 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 CAGE1Q8TC20 777 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 EPS15P42566 896 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 STK31Q9BXU1 1019 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 MAP3K9P80192 1104 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 CECR2Q9BXF3 1484 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 TBC1D12O60347 775 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 USP5P45974 858 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 SMC4Q9NTJ3 1288 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 TPM4P67936 248 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 FOXD4Q12950 439 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-212ENST00000554584 FAM184AQ8NB25 1140 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 OFD1O75665 1012 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 ARL1P40616 181 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-212ENST00000554584 MYO10Q9HD67 2058 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 SLC26A8Q96RN1 970 aa4.02□□□□□ -1.77
SYNE2-212ENST00000554584 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-212ENST00000554584 UQCRHLA0A096LP55 91 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 KIF20AO95235 890 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 FAM177A1Q8N128 213 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-212ENST00000554584 AGRPO00253 132 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 FBLN1P23142 703 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 CHRNA2Q15822 529 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 PKD2L1Q9P0L9 805 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 TDRD9Q8NDG6 1382 aaKnown RBP4.01□□□□□ -1.77
SYNE2-212ENST00000554584 TICAM2Q86XR7 235 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.01□□□□□ -1.77
SYNE2-212ENST00000554584 DPH6Q7L8W6 267 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 ZSCAN29Q8IWY8 852 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-212ENST00000554584 TTC5Q8N0Z6 440 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 GGNBP2Q9H3C7 697 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 CACNA1FO60840 1977 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 ESCO1Q5FWF5 840 aa4.01□□□□□ -1.77
SYNE2-212ENST00000554584 TTC30BQ8N4P2 665 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 TSPYL1Q9H0U9 437 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 KIF16BQ96L93 1317 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 PTCD1O75127 700 aaKnown RBP4□□□□□ -1.77
SYNE2-212ENST00000554584 FNBP4Q8N3X1 1017 aaPredicted RBP4□□□□□ -1.77
SYNE2-212ENST00000554584 ANXA1P04083 346 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 GJC1P36383 396 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 RGS22Q8NE09 1264 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 UBA5Q9GZZ9 404 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 SNRKQ9NRH2 765 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 TTC30AQ86WT1 665 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 EXOC6Q8TAG9 804 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 MMRN2Q9H8L6 949 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 CDR1P51861 262 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 ATP2B3Q16720 1220 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 TANGO6Q9C0B7 1094 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 APBB1IPQ7Z5R6 666 aaPredicted RBP4□□□□□ -1.77
SYNE2-212ENST00000554584 SETQ01105 290 aaPredicted RBP4□□□□□ -1.77
SYNE2-212ENST00000554584 RIMBP2O15034 1052 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 C1orf141Q5JVX7 400 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 AKNAD1Q5T1N1 836 aa4□□□□□ -1.77
SYNE2-212ENST00000554584 COG6Q9Y2V7 657 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 BICD2Q8TD16 824 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 CCNB3Q8WWL7 1395 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 TSR1Q2NL82 804 aaKnown RBP3.99□□□□□ -1.77
SYNE2-212ENST00000554584 TXNDC2Q86VQ3 553 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 AK9Q5TCS8 1911 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC82Q8N4S0 544 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 MRVI1Q9Y6F6 885 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 ZNF513Q8N8E2 541 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-212ENST00000554584 NGLY1Q96IV0 654 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 VAT1LQ9HCJ6 419 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 SYNE3Q6ZMZ3 975 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 EID1Q9Y6B2 187 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 SDK1Q7Z5N4 2213 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 ANKRD45Q5TZF3 282 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 RBM10P98175 930 aaKnown RBP3.99□□□□□ -1.77
SYNE2-212ENST00000554584 MKRN3Q13064 507 aaKnown RBP3.99□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC181Q5TID7 509 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 NUP133Q8WUM0 1156 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms