RNA–Protein interactions for RNA: ENST00000554533.5

CASC1-207, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 2,208 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-207ENST00000554533 TSC1Q92574 1164 aa8.01□□□□□ -1.13
CASC1-207ENST00000554533 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
CASC1-207ENST00000554533 FUT2Q10981 343 aa8.01□□□□□ -1.13
CASC1-207ENST00000554533 VAC14Q08AM6 782 aa8□□□□□ -1.13
CASC1-207ENST00000554533 FAM9AQ8IZU1 332 aaPredicted RBP8□□□□□ -1.13
CASC1-207ENST00000554533 KCNH8Q96L42 1107 aa8□□□□□ -1.13
CASC1-207ENST00000554533 RABGEF1Q9UJ41 708 aa8□□□□□ -1.13
CASC1-207ENST00000554533 SNPHO15079 494 aa7.99□□□□□ -1.13
CASC1-207ENST00000554533 CFAP70Q5T0N1 1121 aa7.99□□□□□ -1.13
CASC1-207ENST00000554533 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
CASC1-207ENST00000554533 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
CASC1-207ENST00000554533 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
CASC1-207ENST00000554533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.98□□□□□ -1.13
CASC1-207ENST00000554533 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
CASC1-207ENST00000554533 WASHC4Q2M389 1173 aa7.98□□□□□ -1.13
CASC1-207ENST00000554533 CFHP08603 1231 aa7.97□□□□□ -1.13
CASC1-207ENST00000554533 RFX1P22670 979 aa7.97□□□□□ -1.13
CASC1-207ENST00000554533 SAMD7Q7Z3H4 446 aa7.97□□□□□ -1.13
CASC1-207ENST00000554533 AXIN2Q9Y2T1 843 aa7.97□□□□□ -1.13
CASC1-207ENST00000554533 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
CASC1-207ENST00000554533 PBXIP1Q96AQ6 731 aa7.97□□□□□ -1.13
CASC1-207ENST00000554533 ARHGAP33O14559 1287 aa7.96□□□□□ -1.14
CASC1-207ENST00000554533 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
CASC1-207ENST00000554533 SLC4A5Q9BY07 1137 aa7.96□□□□□ -1.14
CASC1-207ENST00000554533 ALG2Q9H553 416 aa7.96□□□□□ -1.14
CASC1-207ENST00000554533 PER1O15534 1290 aaPredicted RBP7.95□□□□□ -1.14
CASC1-207ENST00000554533 PPP1R12CQ9BZL4 782 aa7.95□□□□□ -1.14
CASC1-207ENST00000554533 ACIN1Q9UKV3 1341 aaKnown RBP7.95□□□□□ -1.14
CASC1-207ENST00000554533 VARS2Q5ST30 1063 aaKnown RBP7.94□□□□□ -1.14
CASC1-207ENST00000554533 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
CASC1-207ENST00000554533 PRR7Q8TB68 274 aa7.94□□□□□ -1.14
CASC1-207ENST00000554533 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
CASC1-207ENST00000554533 NR6A1Q15406 480 aa7.94□□□□□ -1.14
CASC1-207ENST00000554533 VPS9D1Q9Y2B5 631 aa7.94□□□□□ -1.14
CASC1-207ENST00000554533 ATP6V1AP38606 617 aa7.93□□□□□ -1.14
CASC1-207ENST00000554533 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
CASC1-207ENST00000554533 GRIPAP1Q4V328 841 aa7.93□□□□□ -1.14
CASC1-207ENST00000554533 PALM3A6NDB9 673 aaPredicted RBP7.93□□□□□ -1.14
CASC1-207ENST00000554533 RNF40O75150 1001 aa7.93□□□□□ -1.14
CASC1-207ENST00000554533 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
CASC1-207ENST00000554533 GZF1Q9H116 711 aaPredicted RBP7.91□□□□□ -1.14
CASC1-207ENST00000554533 ERBB3P21860 1342 aa7.91□□□□□ -1.14
CASC1-207ENST00000554533 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
CASC1-207ENST00000554533 PUS10Q3MIT2 529 aaKnown RBP7.9□□□□□ -1.14
CASC1-207ENST00000554533 LMOD1P29536 600 aaPredicted RBP7.9□□□□□ -1.15
CASC1-207ENST00000554533 MORN1Q5T089 497 aa7.9□□□□□ -1.15
CASC1-207ENST00000554533 RETREG3Q86VR2 466 aa7.9□□□□□ -1.15
CASC1-207ENST00000554533 TFIP11Q9UBB9 837 aaKnown RBP7.9□□□□□ -1.15
CASC1-207ENST00000554533 LAPTM4BQ86VI4 370 aa7.89□□□□□ -1.15
CASC1-207ENST00000554533 OTUD5Q96G74 571 aa7.89□□□□□ -1.15
CASC1-207ENST00000554533 SLC27A5Q9Y2P5 690 aa7.89□□□□□ -1.15
CASC1-207ENST00000554533 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
CASC1-207ENST00000554533 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
CASC1-207ENST00000554533 ZFRQ96KR1 1074 aaKnown RBP7.88□□□□□ -1.15
CASC1-207ENST00000554533 KMT5BQ4FZB7 885 aa7.87□□□□□ -1.15
CASC1-207ENST00000554533 TMCO4Q5TGY1 634 aa7.87□□□□□ -1.15
CASC1-207ENST00000554533 EIF5BO60841 1220 aaKnown RBP7.87□□□□□ -1.15
CASC1-207ENST00000554533 CSB-PGBD3P0DP91 1061 aa7.87□□□□□ -1.15
CASC1-207ENST00000554533 PDE4CQ08493 712 aa7.87□□□□□ -1.15
CASC1-207ENST00000554533 CDCA8Q53HL2 280 aa7.87□□□□□ -1.15
CASC1-207ENST00000554533 ACTN4O43707 911 aaKnown RBP7.86□□□□□ -1.15
CASC1-207ENST00000554533 SOX11P35716 441 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 PBX2P40425 430 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 RNF19BQ6ZMZ0 732 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 TBC1D9Q6ZT07 1266 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
CASC1-207ENST00000554533 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 RGS22Q8NE09 1264 aa7.86□□□□□ -1.15
CASC1-207ENST00000554533 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
CASC1-207ENST00000554533 LYPD8Q6UX82 237 aa7.85□□□□□ -1.15
CASC1-207ENST00000554533 BRD1O95696 1058 aa7.84□□□□□ -1.15
CASC1-207ENST00000554533 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
CASC1-207ENST00000554533 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
CASC1-207ENST00000554533 TMEM88BA6NKF7 163 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 FBXO45P0C2W1 286 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 Q3C1V9 767 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 ZNF687Q8N1G0 1237 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 MARVELD3Q96A59 401 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 ATG7O95352 703 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 KCNA1Q09470 495 aa7.83□□□□□ -1.16
CASC1-207ENST00000554533 PIK3CDO00329 1044 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 ST18O60284 1047 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 EMP3P54852 163 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 NR1H3Q13133 447 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 LRCH3Q96II8 777 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 ATP9BO43861 1147 aa7.82□□□□□ -1.16
CASC1-207ENST00000554533 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
CASC1-207ENST00000554533 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
CASC1-207ENST00000554533 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
CASC1-207ENST00000554533 USB1Q9BQ65 265 aaKnown RBP7.81□□□□□ -1.16
CASC1-207ENST00000554533 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.81□□□□□ -1.16
CASC1-207ENST00000554533 F12P00748 615 aaPredicted RBP7.8□□□□□ -1.16
CASC1-207ENST00000554533 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
CASC1-207ENST00000554533 MAP10Q9P2G4 905 aa7.8□□□□□ -1.16
CASC1-207ENST00000554533 ABCC9O60706 1549 aa7.8□□□□□ -1.16
CASC1-207ENST00000554533 FAM205CA6NFA0 338 aa7.8□□□□□ -1.16
CASC1-207ENST00000554533 TK2O00142 265 aa7.8□□□□□ -1.16
CASC1-207ENST00000554533 FKBPLQ9UIM3 349 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms