RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 ST8SIA5O15466 376 aa9.32□□□□□ -0.92
UBR7-203ENST00000553857 KDM4AO75164 1064 aa9.32□□□□□ -0.92
UBR7-203ENST00000553857 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
UBR7-203ENST00000553857 RPIAP49247 311 aa9.31□□□□□ -0.92
UBR7-203ENST00000553857 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
UBR7-203ENST00000553857 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
UBR7-203ENST00000553857 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
UBR7-203ENST00000553857 HOXA2O43364 376 aa9.28□□□□□ -0.92
UBR7-203ENST00000553857 MMP16P51512 607 aa9.28□□□□□ -0.92
UBR7-203ENST00000553857 GRIPAP1Q4V328 841 aa9.28□□□□□ -0.92
UBR7-203ENST00000553857 ZNF775Q96BV0 537 aaPredicted RBP9.28□□□□□ -0.92
UBR7-203ENST00000553857 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
UBR7-203ENST00000553857 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
UBR7-203ENST00000553857 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
UBR7-203ENST00000553857 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
UBR7-203ENST00000553857 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
UBR7-203ENST00000553857 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
UBR7-203ENST00000553857 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
UBR7-203ENST00000553857 Q3C1V9 767 aa9.26□□□□□ -0.93
UBR7-203ENST00000553857 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
UBR7-203ENST00000553857 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
UBR7-203ENST00000553857 CLCN1P35523 988 aa9.23□□□□□ -0.93
UBR7-203ENST00000553857 TRIM32Q13049 653 aa9.23□□□□□ -0.93
UBR7-203ENST00000553857 USP46P62068 366 aa9.22□□□□□ -0.93
UBR7-203ENST00000553857 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
UBR7-203ENST00000553857 ZBTB24O43167 697 aaPredicted RBP9.21□□□□□ -0.94
UBR7-203ENST00000553857 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
UBR7-203ENST00000553857 ZMYND10O75800 440 aa9.2□□□□□ -0.94
UBR7-203ENST00000553857 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
UBR7-203ENST00000553857 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
UBR7-203ENST00000553857 ZC3H15Q8WU90 426 aaKnown RBP9.2□□□□□ -0.94
UBR7-203ENST00000553857 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
UBR7-203ENST00000553857 WNT7AO00755 349 aa9.19□□□□□ -0.94
UBR7-203ENST00000553857 AVPP01185 164 aa9.19□□□□□ -0.94
UBR7-203ENST00000553857 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
UBR7-203ENST00000553857 SKOR1P84550 965 aa9.19□□□□□ -0.94
UBR7-203ENST00000553857 J3QL48 77 aa9.18□□□□□ -0.94
UBR7-203ENST00000553857 SMPD1P17405 629 aa9.18□□□□□ -0.94
UBR7-203ENST00000553857 PTCRAQ6ISU1 281 aaPredicted RBP9.18□□□□□ -0.94
UBR7-203ENST00000553857 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
UBR7-203ENST00000553857 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
UBR7-203ENST00000553857 NDUFV2P19404 249 aa9.17□□□□□ -0.94
UBR7-203ENST00000553857 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
UBR7-203ENST00000553857 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
UBR7-203ENST00000553857 TTC24A2A3L6 582 aaPredicted RBP9.16□□□□□ -0.94
UBR7-203ENST00000553857 JUNDP17535 347 aa9.16□□□□□ -0.94
UBR7-203ENST00000553857 MOXD2PA6NHM9 499 aa9.15□□□□□ -0.94
UBR7-203ENST00000553857 FDX1P10109 184 aa9.15□□□□□ -0.94
UBR7-203ENST00000553857 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
UBR7-203ENST00000553857 AXIN1O15169 862 aa9.14□□□□□ -0.95
UBR7-203ENST00000553857 AMHR2Q16671 573 aa9.14□□□□□ -0.95
UBR7-203ENST00000553857 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
UBR7-203ENST00000553857 RETREG3Q86VR2 466 aa9.14□□□□□ -0.95
UBR7-203ENST00000553857 SNIP1Q8TAD8 396 aaKnown RBP9.14□□□□□ -0.95
UBR7-203ENST00000553857 TTLL12Q14166 644 aaPredicted RBP9.13□□□□□ -0.95
UBR7-203ENST00000553857 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
UBR7-203ENST00000553857 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
UBR7-203ENST00000553857 SMCPP49901 116 aaPredicted RBP9.12□□□□□ -0.95
UBR7-203ENST00000553857 HPS1Q92902 700 aa9.12□□□□□ -0.95
UBR7-203ENST00000553857 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
UBR7-203ENST00000553857 MS4A1P11836 297 aa9.1□□□□□ -0.95
UBR7-203ENST00000553857 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
UBR7-203ENST00000553857 PARP9Q8IXQ6 854 aa9.1□□□□□ -0.95
UBR7-203ENST00000553857 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
UBR7-203ENST00000553857 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
UBR7-203ENST00000553857 WNT7BP56706 349 aa9.08□□□□□ -0.96
UBR7-203ENST00000553857 TRIM66O15016 1216 aa9.07□□□□□ -0.96
UBR7-203ENST00000553857 SIAH2O43255 324 aa9.07□□□□□ -0.96
UBR7-203ENST00000553857 PCDHB15Q9Y5E8 787 aa9.07□□□□□ -0.96
UBR7-203ENST00000553857 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
UBR7-203ENST00000553857 SH3BP2P78314 561 aa9.06□□□□□ -0.96
UBR7-203ENST00000553857 PRR7Q8TB68 274 aa9.06□□□□□ -0.96
UBR7-203ENST00000553857 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
UBR7-203ENST00000553857 ATP13A2Q9NQ11 1180 aa9.06□□□□□ -0.96
UBR7-203ENST00000553857 ALDH1A1P00352 501 aa9.05□□□□□ -0.96
UBR7-203ENST00000553857 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
UBR7-203ENST00000553857 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
UBR7-203ENST00000553857 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
UBR7-203ENST00000553857 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
UBR7-203ENST00000553857 MTMR2Q13614 643 aa9.03□□□□□ -0.96
UBR7-203ENST00000553857 PTPRNQ16849 979 aa9.03□□□□□ -0.96
UBR7-203ENST00000553857 RSBN1LQ6PCB5 846 aaPredicted RBP9.03□□□□□ -0.96
UBR7-203ENST00000553857 UNC93B1Q9H1C4 597 aa9.03□□□□□ -0.96
UBR7-203ENST00000553857 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
UBR7-203ENST00000553857 MYO15BQ96JP2 1530 aa9.02□□□□□ -0.97
UBR7-203ENST00000553857 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
UBR7-203ENST00000553857 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
UBR7-203ENST00000553857 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
UBR7-203ENST00000553857 BAP1Q92560 729 aa9.02□□□□□ -0.97
UBR7-203ENST00000553857 HRCP23327 699 aa9.01□□□□□ -0.97
UBR7-203ENST00000553857 KCNH2Q12809 1159 aa9□□□□□ -0.97
UBR7-203ENST00000553857 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
UBR7-203ENST00000553857 AK7Q96M32 723 aa9□□□□□ -0.97
UBR7-203ENST00000553857 NFX1Q12986 1120 aaKnown RBP8.99□□□□□ -0.97
UBR7-203ENST00000553857 TLL2Q9Y6L7 1015 aa8.99□□□□□ -0.97
UBR7-203ENST00000553857 SPTLC1O15269 473 aa8.98□□□□□ -0.97
UBR7-203ENST00000553857 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
UBR7-203ENST00000553857 BMP1P13497 986 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 CSPP1Q1MSJ5 1256 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms