RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
LIN52-201ENST00000553404 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
LIN52-201ENST00000553404 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
LIN52-201ENST00000553404 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
LIN52-201ENST00000553404 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
LIN52-201ENST00000553404 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
LIN52-201ENST00000553404 MED1Q15648 1581 aaPredicted RBP13.34□□□□□ -0.27
LIN52-201ENST00000553404 PPLO60437 1756 aa13.33□□□□□ -0.27
LIN52-201ENST00000553404 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
LIN52-201ENST00000553404 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.28
LIN52-201ENST00000553404 STK26Q9P289 416 aa13.33□□□□□ -0.28
LIN52-201ENST00000553404 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
LIN52-201ENST00000553404 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
LIN52-201ENST00000553404 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
LIN52-201ENST00000553404 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
LIN52-201ENST00000553404 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
LIN52-201ENST00000553404 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
LIN52-201ENST00000553404 HIRIP3Q9BW71 556 aaPredicted RBP13.3□□□□□ -0.28
LIN52-201ENST00000553404 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
LIN52-201ENST00000553404 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
LIN52-201ENST00000553404 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
LIN52-201ENST00000553404 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
LIN52-201ENST00000553404 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
LIN52-201ENST00000553404 PHLPP1O60346 1717 aa13.28□□□□□ -0.28
LIN52-201ENST00000553404 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
LIN52-201ENST00000553404 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.28
LIN52-201ENST00000553404 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.28
LIN52-201ENST00000553404 MST1RQ04912 1400 aa13.27□□□□□ -0.29
LIN52-201ENST00000553404 ADGRL3Q9HAR2 1447 aa13.27□□□□□ -0.29
LIN52-201ENST00000553404 B4GALNT3Q6L9W6 998 aa13.27□□□□□ -0.29
LIN52-201ENST00000553404 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
LIN52-201ENST00000553404 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
LIN52-201ENST00000553404 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
LIN52-201ENST00000553404 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
LIN52-201ENST00000553404 SOCS7O14512 581 aa13.25□□□□□ -0.29
LIN52-201ENST00000553404 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
LIN52-201ENST00000553404 DCCP43146 1447 aa13.25□□□□□ -0.29
LIN52-201ENST00000553404 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 C14orf93Q9H972 538 aaKnown RBP13.24□□□□□ -0.29
LIN52-201ENST00000553404 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
LIN52-201ENST00000553404 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 JCADQ9P266 1359 aa13.24□□□□□ -0.29
LIN52-201ENST00000553404 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
LIN52-201ENST00000553404 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
LIN52-201ENST00000553404 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
LIN52-201ENST00000553404 ASXL1Q8IXJ9 1541 aa13.22□□□□□ -0.29
LIN52-201ENST00000553404 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
LIN52-201ENST00000553404 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIN52-201ENST00000553404 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
LIN52-201ENST00000553404 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
LIN52-201ENST00000553404 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
LIN52-201ENST00000553404 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
LIN52-201ENST00000553404 ABCC11Q96J66 1382 aa13.21□□□□□ -0.3
LIN52-201ENST00000553404 YTHDC2Q9H6S0 1430 aaKnown RBP13.2□□□□□ -0.3
LIN52-201ENST00000553404 AHDC1Q5TGY3 1603 aaPredicted RBP13.2□□□□□ -0.3
LIN52-201ENST00000553404 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
LIN52-201ENST00000553404 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
LIN52-201ENST00000553404 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
LIN52-201ENST00000553404 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
LIN52-201ENST00000553404 MYOM2P54296 1465 aa13.18□□□□□ -0.3
LIN52-201ENST00000553404 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
LIN52-201ENST00000553404 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
LIN52-201ENST00000553404 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
LIN52-201ENST00000553404 TECPR2O15040 1411 aa13.17□□□□□ -0.3
LIN52-201ENST00000553404 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
LIN52-201ENST00000553404 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
LIN52-201ENST00000553404 LRP6O75581 1613 aa13.17□□□□□ -0.3
LIN52-201ENST00000553404 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
LIN52-201ENST00000553404 FOXO3O43524 673 aa13.16□□□□□ -0.3
LIN52-201ENST00000553404 POGKQ9P215 609 aa13.15□□□□□ -0.3
LIN52-201ENST00000553404 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
LIN52-201ENST00000553404 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
LIN52-201ENST00000553404 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
LIN52-201ENST00000553404 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
LIN52-201ENST00000553404 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
LIN52-201ENST00000553404 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
LIN52-201ENST00000553404 NEFMP07197 916 aa13.11□□□□□ -0.31
LIN52-201ENST00000553404 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
LIN52-201ENST00000553404 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
LIN52-201ENST00000553404 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
LIN52-201ENST00000553404 LAMC1P11047 1609 aa13.11□□□□□ -0.31
LIN52-201ENST00000553404 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
LIN52-201ENST00000553404 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
LIN52-201ENST00000553404 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
LIN52-201ENST00000553404 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
LIN52-201ENST00000553404 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
LIN52-201ENST00000553404 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.31
LIN52-201ENST00000553404 AFF2P51816 1311 aa13.08□□□□□ -0.32
LIN52-201ENST00000553404 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
LIN52-201ENST00000553404 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
LIN52-201ENST00000553404 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
LIN52-201ENST00000553404 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms