RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.44
PCNX1-203ENST00000553272 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
PCNX1-203ENST00000553272 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
PCNX1-203ENST00000553272 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
PCNX1-203ENST00000553272 MYOM2P54296 1465 aa12.25□□□□□ -0.45
PCNX1-203ENST00000553272 BCL9LQ86UU0 1499 aa12.25□□□□□ -0.45
PCNX1-203ENST00000553272 CLTCL1P53675 1640 aa12.24□□□□□ -0.45
PCNX1-203ENST00000553272 ROBO2Q9HCK4 1378 aa12.24□□□□□ -0.45
PCNX1-203ENST00000553272 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
PCNX1-203ENST00000553272 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
PCNX1-203ENST00000553272 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
PCNX1-203ENST00000553272 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
PCNX1-203ENST00000553272 KIF1BO60333 1816 aa12.21□□□□□ -0.45
PCNX1-203ENST00000553272 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
PCNX1-203ENST00000553272 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
PCNX1-203ENST00000553272 USP32Q8NFA0 1604 aa12.21□□□□□ -0.46
PCNX1-203ENST00000553272 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
PCNX1-203ENST00000553272 PXDNQ92626 1479 aa12.2□□□□□ -0.46
PCNX1-203ENST00000553272 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
PCNX1-203ENST00000553272 ITGAEP38570 1179 aa12.19□□□□□ -0.46
PCNX1-203ENST00000553272 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
PCNX1-203ENST00000553272 HRCP23327 699 aa12.18□□□□□ -0.46
PCNX1-203ENST00000553272 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
PCNX1-203ENST00000553272 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
PCNX1-203ENST00000553272 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
PCNX1-203ENST00000553272 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
PCNX1-203ENST00000553272 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
PCNX1-203ENST00000553272 CAMTA1Q9Y6Y1 1673 aa12.17□□□□□ -0.46
PCNX1-203ENST00000553272 FOXO3O43524 673 aa12.17□□□□□ -0.46
PCNX1-203ENST00000553272 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
PCNX1-203ENST00000553272 SLIT2O94813 1529 aa12.16□□□□□ -0.46
PCNX1-203ENST00000553272 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
PCNX1-203ENST00000553272 YY1P25490 414 aa12.15□□□□□ -0.46
PCNX1-203ENST00000553272 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
PCNX1-203ENST00000553272 NRAPQ86VF7 1730 aa12.14□□□□□ -0.47
PCNX1-203ENST00000553272 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
PCNX1-203ENST00000553272 PPLO60437 1756 aa12.14□□□□□ -0.47
PCNX1-203ENST00000553272 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
PCNX1-203ENST00000553272 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
PCNX1-203ENST00000553272 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
PCNX1-203ENST00000553272 SEPT12Q8IYM1 358 aa12.12□□□□□ -0.47
PCNX1-203ENST00000553272 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 NAIPQ13075 1403 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 A0A0G2JS52 829 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 MYT1Q01538 1121 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
PCNX1-203ENST00000553272 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
PCNX1-203ENST00000553272 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
PCNX1-203ENST00000553272 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
PCNX1-203ENST00000553272 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
PCNX1-203ENST00000553272 TECPR2O15040 1411 aa12.1□□□□□ -0.47
PCNX1-203ENST00000553272 RREB1Q92766 1687 aa12.1□□□□□ -0.47
PCNX1-203ENST00000553272 BAG6P46379 1132 aa12.09□□□□□ -0.47
PCNX1-203ENST00000553272 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
PCNX1-203ENST00000553272 VPS72Q15906 364 aa12.09□□□□□ -0.47
PCNX1-203ENST00000553272 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
PCNX1-203ENST00000553272 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
PCNX1-203ENST00000553272 KRT28Q7Z3Y7 464 aa12.08□□□□□ -0.48
PCNX1-203ENST00000553272 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
PCNX1-203ENST00000553272 ABCC11Q96J66 1382 aa12.07□□□□□ -0.48
PCNX1-203ENST00000553272 CCDC144AA2RUR9 1427 aa12.07□□□□□ -0.48
PCNX1-203ENST00000553272 ADGRB2O60241 1585 aa12.07□□□□□ -0.48
PCNX1-203ENST00000553272 STK26Q9P289 416 aa12.07□□□□□ -0.48
PCNX1-203ENST00000553272 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
PCNX1-203ENST00000553272 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
PCNX1-203ENST00000553272 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
PCNX1-203ENST00000553272 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
PCNX1-203ENST00000553272 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
PCNX1-203ENST00000553272 RRBP1Q9P2E9 1410 aaKnown RBP12.04□□□□□ -0.48
PCNX1-203ENST00000553272 THSD7AQ9UPZ6 1657 aa12.04□□□□□ -0.48
PCNX1-203ENST00000553272 CHD4Q14839 1912 aa12.04□□□□□ -0.48
PCNX1-203ENST00000553272 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
PCNX1-203ENST00000553272 TMEM132EQ6IEE7 984 aa12.04□□□□□ -0.48
PCNX1-203ENST00000553272 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
PCNX1-203ENST00000553272 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
PCNX1-203ENST00000553272 PSME1Q06323 249 aa12.03□□□□□ -0.48
PCNX1-203ENST00000553272 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
PCNX1-203ENST00000553272 EZH2Q15910 746 aaKnown RBP12.02□□□□□ -0.49
PCNX1-203ENST00000553272 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
PCNX1-203ENST00000553272 SBNO1A3KN83 1393 aa12.02□□□□□ -0.49
PCNX1-203ENST00000553272 ANKRD30BQ9BXX2 1392 aa12.02□□□□□ -0.49
PCNX1-203ENST00000553272 SPATA31E1Q6ZUB1 1445 aa12.02□□□□□ -0.49
PCNX1-203ENST00000553272 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
PCNX1-203ENST00000553272 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
PCNX1-203ENST00000553272 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
PCNX1-203ENST00000553272 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
PCNX1-203ENST00000553272 YTHDC2Q9H6S0 1430 aaKnown RBP12.01□□□□□ -0.49
PCNX1-203ENST00000553272 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
PCNX1-203ENST00000553272 ARHGEF10O15013 1369 aa12□□□□□ -0.49
PCNX1-203ENST00000553272 NRXN1Q9ULB1 1477 aa12□□□□□ -0.49
PCNX1-203ENST00000553272 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
PCNX1-203ENST00000553272 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
PCNX1-203ENST00000553272 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
PCNX1-203ENST00000553272 MYOM1P52179 1685 aa11.99□□□□□ -0.49
PCNX1-203ENST00000553272 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
PCNX1-203ENST00000553272 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
PCNX1-203ENST00000553272 C14orf93Q9H972 538 aaKnown RBP11.97□□□□□ -0.49
PCNX1-203ENST00000553272 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms