RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 TBX22Q9Y458 520 aa7.48□□□□□ -1.21
TMEM106C-221ENST00000553217 TRPM2O94759 1503 aa7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 MEX3CQ5U5Q3 659 aaKnown RBP7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 BRINP3Q76B58 766 aa7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 NEXMIFQ5QGS0 1516 aa7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
TMEM106C-221ENST00000553217 JCADQ9P266 1359 aa7.46□□□□□ -1.21
TMEM106C-221ENST00000553217 DIP2AQ14689 1571 aa7.46□□□□□ -1.21
TMEM106C-221ENST00000553217 NPM3O75607 178 aaKnown RBP7.46□□□□□ -1.22
TMEM106C-221ENST00000553217 ATF3P18847 181 aa7.46□□□□□ -1.22
TMEM106C-221ENST00000553217 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.46□□□□□ -1.22
TMEM106C-221ENST00000553217 NAIPQ13075 1403 aa7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 ASXL1Q8IXJ9 1541 aa7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 SETBP1Q9Y6X0 1596 aa7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 INSRP06213 1382 aa7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 AHDC1Q5TGY3 1603 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-221ENST00000553217 MST1RQ04912 1400 aa7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 KIF1BO60333 1816 aa7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
TMEM106C-221ENST00000553217 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 ROCK2O75116 1388 aaKnown RBP7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 SMG6Q86US8 1419 aaKnown RBP7.43□□□□□ -1.22
TMEM106C-221ENST00000553217 NHSL1Q5SYE7 1610 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 PLEKHG5O94827 1062 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 XPCQ01831 940 aaPredicted RBP7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 NCBP3Q53F19 620 aaKnown RBP7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 AFF2P51816 1311 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 ROBO2Q9HCK4 1378 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 CCDC144AA2RUR9 1427 aa7.42□□□□□ -1.22
TMEM106C-221ENST00000553217 MSH5O43196 834 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 PIK3R4Q99570 1358 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 HFM1A2PYH4 1435 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 ADGRL3Q9HAR2 1447 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 PPLO60437 1756 aa7.41□□□□□ -1.22
TMEM106C-221ENST00000553217 ZBTB22O15209 634 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 STK26Q9P289 416 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 ISY1Q9ULR0 285 aaKnown RBP7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 ADGRF5Q8IZF2 1346 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 PNPLA6Q8IY17 1366 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 PLEKHH1Q9ULM0 1364 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 NCOA3Q9Y6Q9 1424 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 C1orf167Q5SNV9 1468 aa7.4□□□□□ -1.22
TMEM106C-221ENST00000553217 RGS12O14924 1447 aa7.39□□□□□ -1.23
TMEM106C-221ENST00000553217 SPATA31A6Q5VVP1 1343 aa7.39□□□□□ -1.23
TMEM106C-221ENST00000553217 TMEM132EQ6IEE7 984 aa7.39□□□□□ -1.23
TMEM106C-221ENST00000553217 FAM43AQ8N2R8 423 aa7.39□□□□□ -1.23
TMEM106C-221ENST00000553217 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.237e-6■■■■□ 24.4
TMEM106C-221ENST00000553217 RNF123Q5XPI4 1314 aa7.38□□□□□ -1.23
TMEM106C-221ENST00000553217 L1TD1Q5T7N2 865 aaKnown RBP7.38□□□□□ -1.23
TMEM106C-221ENST00000553217 WAPLQ7Z5K2 1190 aa7.38□□□□□ -1.23
TMEM106C-221ENST00000553217 DCCP43146 1447 aa7.37□□□□□ -1.23
TMEM106C-221ENST00000553217 RXRBP28702 533 aa7.37□□□□□ -1.23
TMEM106C-221ENST00000553217 EIF4G2P78344 907 aaKnown RBP eCLIP7.37□□□□□ -1.23
TMEM106C-221ENST00000553217 ZNF772Q68DY9 489 aaPredicted RBP7.37□□□□□ -1.23
TMEM106C-221ENST00000553217 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
TMEM106C-221ENST00000553217 QTRT2Q9H974 415 aaKnown RBP7.36□□□□□ -1.23
TMEM106C-221ENST00000553217 PTCH1Q13635 1447 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 IFT172Q9UG01 1749 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 NEFMP07197 916 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 GSE1Q14687 1217 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 ESCO1Q5FWF5 840 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 LRRC59Q96AG4 307 aaKnown RBP7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 NGLY1Q96IV0 654 aa7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 RGPD8O14715 1765 aaPredicted RBP7.35□□□□□ -1.23
TMEM106C-221ENST00000553217 VGFO15240 615 aaPredicted RBP7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 FOXO3O43524 673 aa7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 NCLP19338 710 aaKnown RBP7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 PTMSP20962 102 aa7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 NUDCQ9Y266 331 aa7.34□□□□□ -1.23
TMEM106C-221ENST00000553217 SOS2Q07890 1332 aaPredicted RBP7.33□□□□□ -1.24
TMEM106C-221ENST00000553217 RRP9O43818 475 aaKnown RBP7.33□□□□□ -1.24
TMEM106C-221ENST00000553217 EIF5BO60841 1220 aaKnown RBP7.33□□□□□ -1.24
TMEM106C-221ENST00000553217 USP21Q9UK80 565 aa7.33□□□□□ -1.24
TMEM106C-221ENST00000553217 SPATA31E1Q6ZUB1 1445 aa7.33□□□□□ -1.24
TMEM106C-221ENST00000553217 PXDNQ92626 1479 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 AAMPQ13685 434 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 CABLES1Q8TDN4 633 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 CDC42BPGQ6DT37 1551 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 FMN2Q9NZ56 1722 aa7.32□□□□□ -1.24
TMEM106C-221ENST00000553217 LAMC1P11047 1609 aa7.31□□□□□ -1.24
TMEM106C-221ENST00000553217 RBM6P78332 1123 aaKnown RBP7.31□□□□□ -1.24
TMEM106C-221ENST00000553217 MYOM2P54296 1465 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms