RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 DAPK1P53355 1430 aa10.58□□□□□ -0.72
LETMD1-236ENST00000553043 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
LETMD1-236ENST00000553043 XRN1Q8IZH2 1706 aaKnown RBP10.56□□□□□ -0.72
LETMD1-236ENST00000553043 FOXO3O43524 673 aa10.56□□□□□ -0.72
LETMD1-236ENST00000553043 VPS72Q15906 364 aa10.56□□□□□ -0.72
LETMD1-236ENST00000553043 NPHP3Q7Z494 1330 aa10.56□□□□□ -0.72
LETMD1-236ENST00000553043 SLIT2O94813 1529 aa10.55□□□□□ -0.72
LETMD1-236ENST00000553043 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
LETMD1-236ENST00000553043 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
LETMD1-236ENST00000553043 EZH2Q15910 746 aaKnown RBP10.55□□□□□ -0.72
LETMD1-236ENST00000553043 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
LETMD1-236ENST00000553043 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
LETMD1-236ENST00000553043 COL22A1Q8NFW1 1626 aaPredicted RBP10.55□□□□□ -0.72
LETMD1-236ENST00000553043 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-236ENST00000553043 PPP1R1BQ9UD71 204 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-236ENST00000553043 HAP1P54257 671 aaPredicted RBP10.53□□□□□ -0.72
LETMD1-236ENST00000553043 LAMC1P11047 1609 aa10.53□□□□□ -0.72
LETMD1-236ENST00000553043 BRWD3Q6RI45 1802 aa10.52□□□□□ -0.73
LETMD1-236ENST00000553043 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
LETMD1-236ENST00000553043 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
LETMD1-236ENST00000553043 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.73
LETMD1-236ENST00000553043 SPHKAPQ2M3C7 1700 aa10.51□□□□□ -0.73
LETMD1-236ENST00000553043 NUTM2FA1L443 756 aa10.51□□□□□ -0.73
LETMD1-236ENST00000553043 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
LETMD1-236ENST00000553043 NRXN3Q9Y4C0 1643 aa10.51□□□□□ -0.73
LETMD1-236ENST00000553043 CROCC2H7BZ55 1655 aa10.5□□□□□ -0.73
LETMD1-236ENST00000553043 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
LETMD1-236ENST00000553043 PXDNQ92626 1479 aa10.5□□□□□ -0.73
LETMD1-236ENST00000553043 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
LETMD1-236ENST00000553043 CAMKK2Q96RR4 588 aa10.49□□□□□ -0.73
LETMD1-236ENST00000553043 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
LETMD1-236ENST00000553043 LRPPRCP42704 1394 aaKnown RBP10.49□□□□□ -0.73
LETMD1-236ENST00000553043 PTPN23Q9H3S7 1636 aa10.48□□□□□ -0.73
LETMD1-236ENST00000553043 SPON1Q9HCB6 807 aa10.48□□□□□ -0.73
LETMD1-236ENST00000553043 SPATA31A3Q5VYP0 1347 aa10.48□□□□□ -0.73
LETMD1-236ENST00000553043 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
LETMD1-236ENST00000553043 TRIM37O94972 964 aa10.47□□□□□ -0.73
LETMD1-236ENST00000553043 ADGRL2O95490 1459 aa10.47□□□□□ -0.73
LETMD1-236ENST00000553043 MARF1Q9Y4F3 1742 aaKnown RBP10.47□□□□□ -0.73
LETMD1-236ENST00000553043 KCNQ2O43526 872 aa10.46□□□□□ -0.73
LETMD1-236ENST00000553043 APBA3O96018 575 aa10.46□□□□□ -0.73
LETMD1-236ENST00000553043 NBPF8Q3BBV2 869 aa10.46□□□□□ -0.73
LETMD1-236ENST00000553043 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
LETMD1-236ENST00000553043 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
LETMD1-236ENST00000553043 DISP2A7MBM2 1401 aa10.46□□□□□ -0.74
LETMD1-236ENST00000553043 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
LETMD1-236ENST00000553043 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
LETMD1-236ENST00000553043 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
LETMD1-236ENST00000553043 FAM50AQ14320 339 aaKnown RBP10.44□□□□□ -0.74
LETMD1-236ENST00000553043 BTG4Q9NY30 223 aa10.43□□□□□ -0.74
LETMD1-236ENST00000553043 E9PCH4 1651 aa10.43□□□□□ -0.74
LETMD1-236ENST00000553043 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
LETMD1-236ENST00000553043 HFM1A2PYH4 1435 aa10.42□□□□□ -0.74
LETMD1-236ENST00000553043 NUP155O75694 1391 aa10.42□□□□□ -0.74
LETMD1-236ENST00000553043 FAM196AQ6ZSG2 479 aa10.41□□□□□ -0.74
LETMD1-236ENST00000553043 RGPD1P0DJD0 1748 aa10.41□□□□□ -0.74
LETMD1-236ENST00000553043 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
LETMD1-236ENST00000553043 PSME1Q06323 249 aa10.4□□□□□ -0.74
LETMD1-236ENST00000553043 WAPLQ7Z5K2 1190 aa10.4□□□□□ -0.74
LETMD1-236ENST00000553043 CAMTA1Q9Y6Y1 1673 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
LETMD1-236ENST00000553043 APLP2Q06481 763 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 IQGAP3Q86VI3 1631 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 NAIPQ13075 1403 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 TNS3Q68CZ2 1445 aa10.39□□□□□ -0.75
LETMD1-236ENST00000553043 SPATA31A5Q5VU36 1347 aa10.38□□□□□ -0.75
LETMD1-236ENST00000553043 SPATA31A7Q8IWB4 1347 aa10.38□□□□□ -0.75
LETMD1-236ENST00000553043 STK26Q9P289 416 aa10.38□□□□□ -0.75
LETMD1-236ENST00000553043 NEXMIFQ5QGS0 1516 aa10.38□□□□□ -0.75
LETMD1-236ENST00000553043 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
LETMD1-236ENST00000553043 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
LETMD1-236ENST00000553043 PLCH1Q4KWH8 1693 aa10.37□□□□□ -0.75
LETMD1-236ENST00000553043 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
LETMD1-236ENST00000553043 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
LETMD1-236ENST00000553043 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
LETMD1-236ENST00000553043 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
LETMD1-236ENST00000553043 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
LETMD1-236ENST00000553043 NWD2Q9ULI1 1742 aa10.35□□□□□ -0.75
LETMD1-236ENST00000553043 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
LETMD1-236ENST00000553043 SYT17Q9BSW7 474 aa10.34□□□□□ -0.75
LETMD1-236ENST00000553043 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
LETMD1-236ENST00000553043 USP35Q9P2H5 1018 aa10.34□□□□□ -0.75
LETMD1-236ENST00000553043 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
LETMD1-236ENST00000553043 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
LETMD1-236ENST00000553043 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
LETMD1-236ENST00000553043 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
LETMD1-236ENST00000553043 SBNO1A3KN83 1393 aa10.33□□□□□ -0.76
LETMD1-236ENST00000553043 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
LETMD1-236ENST00000553043 PTGER2P43116 358 aa10.32□□□□□ -0.76
LETMD1-236ENST00000553043 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
LETMD1-236ENST00000553043 PMFBP1Q8TBY8 1022 aa10.31□□□□□ -0.76
LETMD1-236ENST00000553043 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
LETMD1-236ENST00000553043 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
LETMD1-236ENST00000553043 TMEM132EQ6IEE7 984 aa10.3□□□□□ -0.76
LETMD1-236ENST00000553043 THSD7AQ9UPZ6 1657 aa10.3□□□□□ -0.76
LETMD1-236ENST00000553043 NRKQ7Z2Y5 1582 aa10.3□□□□□ -0.76
LETMD1-236ENST00000553043 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
LETMD1-236ENST00000553043 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
LETMD1-236ENST00000553043 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms