RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 NEUROD1Q13562 356 aa11.14□□□□□ -0.63
NPAS3-213ENST00000552874 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
NPAS3-213ENST00000552874 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
NPAS3-213ENST00000552874 NCOA3Q9Y6Q9 1424 aa11.14□□□□□ -0.63
NPAS3-213ENST00000552874 DCCP43146 1447 aa11.13□□□□□ -0.63
NPAS3-213ENST00000552874 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-213ENST00000552874 TMEM94Q12767 1356 aa11.13□□□□□ -0.63
NPAS3-213ENST00000552874 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
NPAS3-213ENST00000552874 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
NPAS3-213ENST00000552874 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
NPAS3-213ENST00000552874 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
NPAS3-213ENST00000552874 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
NPAS3-213ENST00000552874 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
NPAS3-213ENST00000552874 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
NPAS3-213ENST00000552874 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
NPAS3-213ENST00000552874 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
NPAS3-213ENST00000552874 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
NPAS3-213ENST00000552874 AMOTL2Q9Y2J4 779 aa11.1□□□□□ -0.63
NPAS3-213ENST00000552874 MYOM1P52179 1685 aa11.1□□□□□ -0.63
NPAS3-213ENST00000552874 MST1RQ04912 1400 aa11.08□□□□□ -0.64
NPAS3-213ENST00000552874 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
NPAS3-213ENST00000552874 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
NPAS3-213ENST00000552874 SIRT1Q96EB6 747 aa11.07□□□□□ -0.64
NPAS3-213ENST00000552874 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
NPAS3-213ENST00000552874 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
NPAS3-213ENST00000552874 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
NPAS3-213ENST00000552874 CAPN15O75808 1086 aa11.06□□□□□ -0.64
NPAS3-213ENST00000552874 BCANQ96GW7 911 aa11.06□□□□□ -0.64
NPAS3-213ENST00000552874 TRPM3Q9HCF6 1732 aaPredicted RBP11.06□□□□□ -0.64
NPAS3-213ENST00000552874 ATP7BP35670 1465 aa11.06□□□□□ -0.64
NPAS3-213ENST00000552874 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
NPAS3-213ENST00000552874 SBNO2Q9Y2G9 1366 aa11.05□□□□□ -0.64
NPAS3-213ENST00000552874 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
NPAS3-213ENST00000552874 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
NPAS3-213ENST00000552874 DSG3P32926 999 aa11.04□□□□□ -0.64
NPAS3-213ENST00000552874 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
NPAS3-213ENST00000552874 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
NPAS3-213ENST00000552874 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
NPAS3-213ENST00000552874 ABCA3Q99758 1704 aa11.03□□□□□ -0.64
NPAS3-213ENST00000552874 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
NPAS3-213ENST00000552874 MSH6P52701 1360 aa11.03□□□□□ -0.64
NPAS3-213ENST00000552874 C1orf167Q5SNV9 1468 aa11.02□□□□□ -0.65
NPAS3-213ENST00000552874 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
NPAS3-213ENST00000552874 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
NPAS3-213ENST00000552874 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 PRAM1Q96QH2 718 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 STK26Q9P289 416 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 TRAK1Q9UPV9 953 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 USP47Q96K76 1375 aa11.01□□□□□ -0.65
NPAS3-213ENST00000552874 USP54Q70EL1 1684 aa11□□□□□ -0.65
NPAS3-213ENST00000552874 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
NPAS3-213ENST00000552874 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
NPAS3-213ENST00000552874 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
NPAS3-213ENST00000552874 CENPJQ9HC77 1338 aaPredicted RBP10.98□□□□□ -0.65
NPAS3-213ENST00000552874 PXDNQ92626 1479 aa10.98□□□□□ -0.65
NPAS3-213ENST00000552874 TESK2Q96S53 571 aa10.97□□□□□ -0.65
NPAS3-213ENST00000552874 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
NPAS3-213ENST00000552874 PRR36Q9H6K5 1346 aa10.97□□□□□ -0.65
NPAS3-213ENST00000552874 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
NPAS3-213ENST00000552874 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
NPAS3-213ENST00000552874 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
NPAS3-213ENST00000552874 PIK3C2AO00443 1686 aa10.95□□□□□ -0.66
NPAS3-213ENST00000552874 KIF20BQ96Q89 1820 aa10.94□□□□□ -0.66
NPAS3-213ENST00000552874 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66
NPAS3-213ENST00000552874 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
NPAS3-213ENST00000552874 PHRF1Q9P1Y6 1649 aaKnown RBP10.94□□□□□ -0.66
NPAS3-213ENST00000552874 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
NPAS3-213ENST00000552874 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
NPAS3-213ENST00000552874 BRINP3Q76B58 766 aa10.93□□□□□ -0.66
NPAS3-213ENST00000552874 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
NPAS3-213ENST00000552874 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
NPAS3-213ENST00000552874 WASLO00401 505 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-213ENST00000552874 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-213ENST00000552874 HIRIP3Q9BW71 556 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-213ENST00000552874 POGKQ9P215 609 aa10.92□□□□□ -0.66
NPAS3-213ENST00000552874 POLR3AO14802 1390 aaPredicted RBP10.91□□□□□ -0.66
NPAS3-213ENST00000552874 ST20-MTHFSA0A0A6YYL1 179 aa10.91□□□□□ -0.66
NPAS3-213ENST00000552874 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
NPAS3-213ENST00000552874 TOM1O60784 492 aa10.9□□□□□ -0.66
NPAS3-213ENST00000552874 ATF3P18847 181 aa10.9□□□□□ -0.66
NPAS3-213ENST00000552874 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
NPAS3-213ENST00000552874 SSH2Q76I76 1423 aa10.9□□□□□ -0.66
NPAS3-213ENST00000552874 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
NPAS3-213ENST00000552874 ORAI2Q96SN7 254 aa10.89□□□□□ -0.67
NPAS3-213ENST00000552874 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
NPAS3-213ENST00000552874 PPIP5K1Q6PFW1 1433 aa10.89□□□□□ -0.67
NPAS3-213ENST00000552874 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
NPAS3-213ENST00000552874 HSPA5P11021 654 aaKnown RBP10.88□□□□□ -0.67
NPAS3-213ENST00000552874 CDK19Q9BWU1 502 aa10.88□□□□□ -0.67
NPAS3-213ENST00000552874 ATAD2Q6PL18 1390 aa10.87□□□□□ -0.67
NPAS3-213ENST00000552874 SOS2Q07890 1332 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-213ENST00000552874 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
NPAS3-213ENST00000552874 NUDT16Q96DE0 195 aaKnown RBP10.86□□□□□ -0.67
NPAS3-213ENST00000552874 LRP6O75581 1613 aa10.86□□□□□ -0.67
NPAS3-213ENST00000552874 PLCH1Q4KWH8 1693 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 USP6P35125 1406 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 NUTM2FA1L443 756 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms