RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	MET	P08581	1390 aa		13.93	□□□□□ -0.18
DDX23-215	ENST00000552555	ANKRD36B	Q8N2N9	1353 aa		13.93	□□□□□ -0.18
DDX23-215	ENST00000552555	CEBPA	P49715	358 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX23-215	ENST00000552555	KNDC1	Q76NI1	1749 aa		13.92	□□□□□ -0.18
DDX23-215	ENST00000552555	CPS1	P31327	1500 aa		13.91	□□□□□ -0.18
DDX23-215	ENST00000552555	PPP2R1A	P30153	589 aa		13.91	□□□□□ -0.18
DDX23-215	ENST00000552555	SLC12A5	Q9H2X9	1139 aa		13.91	□□□□□ -0.18
DDX23-215	ENST00000552555	STK26	Q9P289	416 aa		13.91	□□□□□ -0.18
DDX23-215	ENST00000552555	ADAMTSL3	P82987	1691 aa		13.91	□□□□□ -0.18
DDX23-215	ENST00000552555	LTK	P29376	864 aa		13.9	□□□□□ -0.18
DDX23-215	ENST00000552555	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.9	□□□□□ -0.18
DDX23-215	ENST00000552555	NSD2	O96028	1365 aa		13.89	□□□□□ -0.19
DDX23-215	ENST00000552555	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.89	□□□□□ -0.19
DDX23-215	ENST00000552555	POGK	Q9P215	609 aa		13.89	□□□□□ -0.19
DDX23-215	ENST00000552555	NSD3	Q9BZ95	1437 aa		13.89	□□□□□ -0.19
DDX23-215	ENST00000552555	KDM4F	A0A1W2PPD8	638 aa		13.88	□□□□□ -0.19
DDX23-215	ENST00000552555	BLM	P54132	1417 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX23-215	ENST00000552555	CABP2	Q9NPB3	220 aa		13.87	□□□□□ -0.19
DDX23-215	ENST00000552555	TBX22	Q9Y458	520 aa		13.87	□□□□□ -0.19
DDX23-215	ENST00000552555	EID1	Q9Y6B2	187 aa		13.87	□□□□□ -0.19
DDX23-215	ENST00000552555	DIP2A	Q14689	1571 aa		13.87	□□□□□ -0.19
DDX23-215	ENST00000552555	CD163L1	Q9NR16	1453 aa		13.87	□□□□□ -0.19
DDX23-215	ENST00000552555	PLEKHH1	Q9ULM0	1364 aa		13.86	□□□□□ -0.19
DDX23-215	ENST00000552555	TXNDC2	Q86VQ3	553 aa		13.86	□□□□□ -0.19
DDX23-215	ENST00000552555	CNGB1	Q14028	1251 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX23-215	ENST00000552555	CDK19	Q9BWU1	502 aa		13.85	□□□□□ -0.19
DDX23-215	ENST00000552555	CGNL1	Q0VF96	1302 aa		13.85	□□□□□ -0.19
DDX23-215	ENST00000552555	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX23-215	ENST00000552555	POLR3A	O14802	1390 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX23-215	ENST00000552555	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX23-215	ENST00000552555	ATP7B	P35670	1465 aa		13.84	□□□□□ -0.19
DDX23-215	ENST00000552555		A0A1W2PP64	1363 aa		13.83	□□□□□ -0.19
DDX23-215	ENST00000552555	PIK3R4	Q99570	1358 aa		13.83	□□□□□ -0.19
DDX23-215	ENST00000552555	ADGRB2	O60241	1585 aa		13.83	□□□□□ -0.19
DDX23-215	ENST00000552555	SMG6	Q86US8	1419 aa	Known RBP	13.83	□□□□□ -0.2
DDX23-215	ENST00000552555	WASL	O00401	505 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX23-215	ENST00000552555	SRPK2	P78362	688 aa	Known RBP	13.83	□□□□□ -0.2
DDX23-215	ENST00000552555	WAPL	Q7Z5K2	1190 aa		13.83	□□□□□ -0.2
DDX23-215	ENST00000552555	TERF2IP	Q9NYB0	399 aa		13.83	□□□□□ -0.2
DDX23-215	ENST00000552555	PTCH1	Q13635	1447 aa		13.82	□□□□□ -0.2
DDX23-215	ENST00000552555	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
DDX23-215	ENST00000552555	ROBO2	Q9HCK4	1378 aa		13.82	□□□□□ -0.2
DDX23-215	ENST00000552555	ZNF142	P52746	1687 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX23-215	ENST00000552555	RIMS1	Q86UR5	1692 aa	Known RBP	13.82	□□□□□ -0.2
DDX23-215	ENST00000552555	PTPRU	Q92729	1446 aa		13.81	□□□□□ -0.2
DDX23-215	ENST00000552555	CPSF1	Q10570	1443 aa	Known RBP	13.81	□□□□□ -0.2
DDX23-215	ENST00000552555	PDE3B	Q13370	1112 aa		13.79	□□□□□ -0.2
DDX23-215	ENST00000552555	MORC1	Q86VD1	984 aa		13.79	□□□□□ -0.2
DDX23-215	ENST00000552555	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX23-215	ENST00000552555	SENP3	Q9H4L4	574 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX23-215	ENST00000552555	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.78	□□□□□ -0.2
DDX23-215	ENST00000552555	CABP1	Q9NZU7	370 aa		13.77	□□□□□ -0.21
DDX23-215	ENST00000552555	ADAMTS8	Q9UP79	889 aa		13.77	□□□□□ -0.21
DDX23-215	ENST00000552555	NUDC	Q9Y266	331 aa		13.77	□□□□□ -0.21
DDX23-215	ENST00000552555	XRN1	Q8IZH2	1706 aa	Known RBP	13.76	□□□□□ -0.21
DDX23-215	ENST00000552555	CDC42BPG	Q6DT37	1551 aa		13.76	□□□□□ -0.21
DDX23-215	ENST00000552555	NGEF	Q8N5V2	710 aa		13.76	□□□□□ -0.21
DDX23-215	ENST00000552555	BCAN	Q96GW7	911 aa		13.76	□□□□□ -0.21
DDX23-215	ENST00000552555	CCDC61	Q9Y6R9	512 aa		13.76	□□□□□ -0.21
DDX23-215	ENST00000552555	RNF123	Q5XPI4	1314 aa		13.75	□□□□□ -0.21
DDX23-215	ENST00000552555	FYB1	O15117	783 aa		13.75	□□□□□ -0.21
DDX23-215	ENST00000552555	SLC26A8	Q96RN1	970 aa		13.75	□□□□□ -0.21
DDX23-215	ENST00000552555	AMOTL2	Q9Y2J4	779 aa		13.75	□□□□□ -0.21
DDX23-215	ENST00000552555	EDC4	Q6P2E9	1401 aa	Known RBP	13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	WDR43	Q15061	677 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	ERICH6B	Q5W0A0	696 aa		13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	ANKLE2	Q86XL3	938 aa		13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	NUDT16	Q96DE0	195 aa	Known RBP	13.74	□□□□□ -0.21
DDX23-215	ENST00000552555	PPIP5K1	Q6PFW1	1433 aa		13.73	□□□□□ -0.21
DDX23-215	ENST00000552555	PLEKHG3	A1L390	1219 aa		13.73	□□□□□ -0.21
DDX23-215	ENST00000552555	NCBP3	Q53F19	620 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-215	ENST00000552555	ANKRD26	Q9UPS8	1709 aa		13.73	□□□□□ -0.21
DDX23-215	ENST00000552555	SETD1B	Q9UPS6	1966 aa	Known RBP	13.72	□□□□□ -0.21
DDX23-215	ENST00000552555	ZNF521	Q96K83	1311 aa		13.72	□□□□□ -0.21
DDX23-215	ENST00000552555	PRR36	Q9H6K5	1346 aa		13.72	□□□□□ -0.21
DDX23-215	ENST00000552555	ZNF692	Q9BU19	519 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX23-215	ENST00000552555	PNPLA6	Q8IY17	1366 aa		13.71	□□□□□ -0.21
DDX23-215	ENST00000552555	NEFL	P07196	543 aa		13.71	□□□□□ -0.21
DDX23-215	ENST00000552555	TOPAZ1	Q8N9V7	1692 aa		13.7	□□□□□ -0.22
DDX23-215	ENST00000552555	MTHFS	P49914	203 aa		13.7	□□□□□ -0.22
DDX23-215	ENST00000552555	SHPRH	Q149N8	1683 aa		13.69	□□□□□ -0.22
DDX23-215	ENST00000552555	COL3A1	P02461	1466 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX23-215	ENST00000552555	CFAP53	Q96M91	514 aa		13.69	□□□□□ -0.22
DDX23-215	ENST00000552555	ANKAR	Q7Z5J8	1434 aa		13.69	□□□□□ -0.22
DDX23-215	ENST00000552555	AATK	Q6ZMQ8	1374 aa		13.69	□□□□□ -0.22
DDX23-215	ENST00000552555	MON2	Q7Z3U7	1717 aa		13.68	□□□□□ -0.22
DDX23-215	ENST00000552555	SSH2	Q76I76	1423 aa		13.68	□□□□□ -0.22
DDX23-215	ENST00000552555	FKBP8	Q14318	412 aa		13.68	□□□□□ -0.22
DDX23-215	ENST00000552555	PLPPR3	Q6T4P5	718 aa		13.68	□□□□□ -0.22
DDX23-215	ENST00000552555	GGNBP2	Q9H3C7	697 aa		13.68	□□□□□ -0.22
DDX23-215	ENST00000552555	NPHP4	O75161	1426 aa	Predicted RBP	13.66	□□□□□ -0.22
DDX23-215	ENST00000552555	AKAP12	Q02952	1782 aa		13.66	□□□□□ -0.22
DDX23-215	ENST00000552555	KCNA6	P17658	529 aa		13.66	□□□□□ -0.22
DDX23-215	ENST00000552555	KIF20B	Q96Q89	1820 aa		13.66	□□□□□ -0.22
DDX23-215	ENST00000552555	TRMT2A	Q8IZ69	625 aa	Known RBP	13.65	□□□□□ -0.22
DDX23-215	ENST00000552555	PHF23	Q9BUL5	403 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-215	ENST00000552555	NRK	Q7Z2Y5	1582 aa		13.64	□□□□□ -0.23
DDX23-215	ENST00000552555	IQSEC2	Q5JU85	1478 aa		13.64	□□□□□ -0.23
DDX23-215	ENST00000552555	USP6	P35125	1406 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms