RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 BCANQ96GW7 911 aa11.73□□□□□ -0.53
USP15-218ENST00000552346 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
USP15-218ENST00000552346 POTECB2RU33 542 aa11.71□□□□□ -0.53
USP15-218ENST00000552346 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
USP15-218ENST00000552346 CCDC102AQ96A19 550 aa11.71□□□□□ -0.53
USP15-218ENST00000552346 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
USP15-218ENST00000552346 TOR4AQ9NXH8 423 aa11.7□□□□□ -0.54
USP15-218ENST00000552346 MMP16P51512 607 aa11.69□□□□□ -0.54
USP15-218ENST00000552346 USP46P62068 366 aa11.69□□□□□ -0.54
USP15-218ENST00000552346 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
USP15-218ENST00000552346 HLA-CQ95604 372 aa11.67□□□□□ -0.54
USP15-218ENST00000552346 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
USP15-218ENST00000552346 HOXA2O43364 376 aa11.65□□□□□ -0.54
USP15-218ENST00000552346 CLCN1P35523 988 aa11.65□□□□□ -0.54
USP15-218ENST00000552346 TTC24A2A3L6 582 aaPredicted RBP11.64□□□□□ -0.55
USP15-218ENST00000552346 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
USP15-218ENST00000552346 AVPP01185 164 aa11.64□□□□□ -0.55
USP15-218ENST00000552346 TRIM32Q13049 653 aa11.64□□□□□ -0.55
USP15-218ENST00000552346 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
USP15-218ENST00000552346 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
USP15-218ENST00000552346 WNT7AO00755 349 aa11.62□□□□□ -0.55
USP15-218ENST00000552346 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
USP15-218ENST00000552346 AXIN1O15169 862 aa11.61□□□□□ -0.55
USP15-218ENST00000552346 GUCA2AQ02747 115 aa11.61□□□□□ -0.55
USP15-218ENST00000552346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP15-218ENST00000552346 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
USP15-218ENST00000552346 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
USP15-218ENST00000552346 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
USP15-218ENST00000552346 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
USP15-218ENST00000552346 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
USP15-218ENST00000552346 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
USP15-218ENST00000552346 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
USP15-218ENST00000552346 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
USP15-218ENST00000552346 SMPD1P17405 629 aa11.55□□□□□ -0.56
USP15-218ENST00000552346 JUNDP17535 347 aa11.55□□□□□ -0.56
USP15-218ENST00000552346 REPIN1Q9BWE0 567 aaKnown RBP11.55□□□□□ -0.56
USP15-218ENST00000552346 GMPR2Q9P2T1 348 aaKnown RBP11.55□□□□□ -0.56
USP15-218ENST00000552346 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
USP15-218ENST00000552346 J3QL48 77 aa11.52□□□□□ -0.57
USP15-218ENST00000552346 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
USP15-218ENST00000552346 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
USP15-218ENST00000552346 FDX1P10109 184 aa11.51□□□□□ -0.57
USP15-218ENST00000552346 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
USP15-218ENST00000552346 WNT7BP56706 349 aa11.51□□□□□ -0.57
USP15-218ENST00000552346 SKOR1P84550 965 aa11.51□□□□□ -0.57
USP15-218ENST00000552346 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
USP15-218ENST00000552346 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
USP15-218ENST00000552346 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
USP15-218ENST00000552346 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
USP15-218ENST00000552346 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
USP15-218ENST00000552346 TTLL12Q14166 644 aaPredicted RBP11.48□□□□□ -0.57
USP15-218ENST00000552346 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
USP15-218ENST00000552346 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
USP15-218ENST00000552346 HPS1Q92902 700 aa11.47□□□□□ -0.57
USP15-218ENST00000552346 ZMYND10O75800 440 aa11.46□□□□□ -0.57
USP15-218ENST00000552346 PTCRAQ6ISU1 281 aaPredicted RBP11.46□□□□□ -0.57
USP15-218ENST00000552346 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
USP15-218ENST00000552346 MS4A1P11836 297 aa11.44□□□□□ -0.58
USP15-218ENST00000552346 NDUFV2P19404 249 aa11.44□□□□□ -0.58
USP15-218ENST00000552346 AMHR2Q16671 573 aa11.44□□□□□ -0.58
USP15-218ENST00000552346 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
USP15-218ENST00000552346 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
USP15-218ENST00000552346 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
USP15-218ENST00000552346 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
USP15-218ENST00000552346 CCNYL3P0C7X3 344 aa11.42□□□□□ -0.58
USP15-218ENST00000552346 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
USP15-218ENST00000552346 EHBP1Q8NDI1 1231 aa11.42□□□□□ -0.58
USP15-218ENST00000552346 PTPRNQ16849 979 aa11.4□□□□□ -0.58
USP15-218ENST00000552346 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
USP15-218ENST00000552346 WFS1O76024 890 aa11.39□□□□□ -0.59
USP15-218ENST00000552346 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
USP15-218ENST00000552346 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
USP15-218ENST00000552346 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
USP15-218ENST00000552346 SIAH2O43255 324 aa11.38□□□□□ -0.59
USP15-218ENST00000552346 SH3BP2P78314 561 aa11.38□□□□□ -0.59
USP15-218ENST00000552346 MTMR2Q13614 643 aa11.38□□□□□ -0.59
USP15-218ENST00000552346 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
USP15-218ENST00000552346 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
USP15-218ENST00000552346 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
USP15-218ENST00000552346 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
USP15-218ENST00000552346 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
USP15-218ENST00000552346 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
USP15-218ENST00000552346 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
USP15-218ENST00000552346 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
USP15-218ENST00000552346 NFX1Q12986 1120 aaKnown RBP11.34□□□□□ -0.59
USP15-218ENST00000552346 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
USP15-218ENST00000552346 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
USP15-218ENST00000552346 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
USP15-218ENST00000552346 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
USP15-218ENST00000552346 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
USP15-218ENST00000552346 BAP1Q92560 729 aa11.33□□□□□ -0.6
USP15-218ENST00000552346 GJA5P36382 358 aa11.32□□□□□ -0.6
USP15-218ENST00000552346 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
USP15-218ENST00000552346 TRIM66O15016 1216 aa11.31□□□□□ -0.6
USP15-218ENST00000552346 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
USP15-218ENST00000552346 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
USP15-218ENST00000552346 CAPN5O15484 640 aaPredicted RBP11.29□□□□□ -0.6
USP15-218ENST00000552346 PCDHB15Q9Y5E8 787 aa11.29□□□□□ -0.6
USP15-218ENST00000552346 CTHP32929 405 aa11.28□□□□□ -0.6
USP15-218ENST00000552346 AK7Q96M32 723 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms