RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 DLC1Q96QB1 1528 aa15.06■□□□□ 0
SLC38A1-210ENST00000552197 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
SLC38A1-210ENST00000552197 CENPBP07199 599 aaPredicted RBP15.05■□□□□ 0
SLC38A1-210ENST00000552197 CDK19Q9BWU1 502 aa15.05■□□□□ 0
SLC38A1-210ENST00000552197 MED14O60244 1454 aa15.05■□□□□ -0
SLC38A1-210ENST00000552197 TBX22Q9Y458 520 aa15.05■□□□□ -0
SLC38A1-210ENST00000552197 AMOTL2Q9Y2J4 779 aa15.04■□□□□ -0
SLC38A1-210ENST00000552197 RALBP1Q15311 655 aa15.04■□□□□ -0
SLC38A1-210ENST00000552197 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
SLC38A1-210ENST00000552197 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
SLC38A1-210ENST00000552197 PTPRUQ92729 1446 aa15.04■□□□□ -0
SLC38A1-210ENST00000552197 KNDC1Q76NI1 1749 aa15.02■□□□□ -0
SLC38A1-210ENST00000552197 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
SLC38A1-210ENST00000552197 PUS7Q96PZ0 661 aaKnown RBP15.02□□□□□ -0.01
SLC38A1-210ENST00000552197 TECPR2O15040 1411 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 KDM4FA0A1W2PPD8 638 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 MYBBP1AQ9BQG0 1328 aaKnown RBP15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 SIRT1Q96EB6 747 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 CPS1P31327 1500 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 FAM135BQ49AJ0 1406 aa15.01□□□□□ -0.01
SLC38A1-210ENST00000552197 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
SLC38A1-210ENST00000552197 WASLO00401 505 aaPredicted RBP14.99□□□□□ -0.01
SLC38A1-210ENST00000552197 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
SLC38A1-210ENST00000552197 DIP2AQ14689 1571 aa14.98□□□□□ -0.01
SLC38A1-210ENST00000552197 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
SLC38A1-210ENST00000552197 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
SLC38A1-210ENST00000552197 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
SLC38A1-210ENST00000552197 KCNA6P17658 529 aa14.97□□□□□ -0.01
SLC38A1-210ENST00000552197 NUTM2FA1L443 756 aa14.96□□□□□ -0.01
SLC38A1-210ENST00000552197 ANKRD36BQ8N2N9 1353 aa14.96□□□□□ -0.01
SLC38A1-210ENST00000552197 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.96□□□□□ -0.01
SLC38A1-210ENST00000552197 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
SLC38A1-210ENST00000552197 NPHP4O75161 1426 aaPredicted RBP14.95□□□□□ -0.02
SLC38A1-210ENST00000552197 A0A1W2PP64 1363 aa14.95□□□□□ -0.02
SLC38A1-210ENST00000552197 HSPA2P54652 639 aa14.95□□□□□ -0.02
SLC38A1-210ENST00000552197 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
SLC38A1-210ENST00000552197 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
SLC38A1-210ENST00000552197 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
SLC38A1-210ENST00000552197 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
SLC38A1-210ENST00000552197 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLC38A1-210ENST00000552197 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
SLC38A1-210ENST00000552197 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
SLC38A1-210ENST00000552197 NPC1L1Q9UHC9 1359 aa14.93□□□□□ -0.02
SLC38A1-210ENST00000552197 PPP2R1AP30153 589 aa14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 XRN1Q8IZH2 1706 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 PNISRQ8TF01 805 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-210ENST00000552197 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
SLC38A1-210ENST00000552197 PPIP5K1Q6PFW1 1433 aa14.91□□□□□ -0.02
SLC38A1-210ENST00000552197 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
SLC38A1-210ENST00000552197 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
SLC38A1-210ENST00000552197 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
SLC38A1-210ENST00000552197 SENP3-EIF4A1A0A087X0R7 540 aa14.88□□□□□ -0.03
SLC38A1-210ENST00000552197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.031e-6■■■■□ 22.6
SLC38A1-210ENST00000552197 ADGRB2O60241 1585 aa14.88□□□□□ -0.03
SLC38A1-210ENST00000552197 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
SLC38A1-210ENST00000552197 ATP7BP35670 1465 aa14.87□□□□□ -0.03
SLC38A1-210ENST00000552197 USP32Q8NFA0 1604 aa14.86□□□□□ -0.03
SLC38A1-210ENST00000552197 FYB1O15117 783 aa14.85□□□□□ -0.03
SLC38A1-210ENST00000552197 C14orf37Q86TY3 774 aa14.84□□□□□ -0.03
SLC38A1-210ENST00000552197 RGPD8O14715 1765 aaPredicted RBP14.84□□□□□ -0.03
SLC38A1-210ENST00000552197 PMFBP1Q8TBY8 1022 aa14.84□□□□□ -0.03
SLC38A1-210ENST00000552197 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
SLC38A1-210ENST00000552197 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.04
SLC38A1-210ENST00000552197 NSD2O96028 1365 aa14.83□□□□□ -0.04
SLC38A1-210ENST00000552197 ACEP12821 1306 aa14.82□□□□□ -0.04
SLC38A1-210ENST00000552197 CDC42BPGQ6DT37 1551 aa14.82□□□□□ -0.04
SLC38A1-210ENST00000552197 PROSER2Q86WR7 435 aaPredicted RBP14.81□□□□□ -0.04
SLC38A1-210ENST00000552197 NALCNQ8IZF0 1738 aa14.81□□□□□ -0.04
SLC38A1-210ENST00000552197 ITSN1Q15811 1721 aa14.81□□□□□ -0.04
SLC38A1-210ENST00000552197 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
SLC38A1-210ENST00000552197 PLEKHG3A1L390 1219 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 MTHFSP49914 203 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 NME9Q86XW9 330 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 TOPAZ1Q8N9V7 1692 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 NKTRP30414 1462 aaKnown RBP14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 KIF20BQ96Q89 1820 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 NGDNQ8NEJ9 315 aaKnown RBP14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 ADAMTS8Q9UP79 889 aa14.8□□□□□ -0.04
SLC38A1-210ENST00000552197 EDC4Q6P2E9 1401 aaKnown RBP14.79□□□□□ -0.04
SLC38A1-210ENST00000552197 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
SLC38A1-210ENST00000552197 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
SLC38A1-210ENST00000552197 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
SLC38A1-210ENST00000552197 FBLN1P23142 703 aa14.78□□□□□ -0.04
SLC38A1-210ENST00000552197 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
SLC38A1-210ENST00000552197 FMN2Q9NZ56 1722 aa14.77□□□□□ -0.04
SLC38A1-210ENST00000552197 ANKRD26Q9UPS8 1709 aa14.77□□□□□ -0.04
SLC38A1-210ENST00000552197 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
SLC38A1-210ENST00000552197 ADGRL3Q9HAR2 1447 aa14.77□□□□□ -0.04
SLC38A1-210ENST00000552197 STRCQ7RTU9 1775 aa14.77□□□□□ -0.05
SLC38A1-210ENST00000552197 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SLC38A1-210ENST00000552197 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
SLC38A1-210ENST00000552197 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms