RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TRIM26Q12899 539 aaPredicted RBP8.58□□□□□ -1.04
CCDC65-204ENST00000552188 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
CCDC65-204ENST00000552188 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
CCDC65-204ENST00000552188 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
CCDC65-204ENST00000552188 METP08581 1390 aa8.58□□□□□ -1.04
CCDC65-204ENST00000552188 LAMC1P11047 1609 aa8.58□□□□□ -1.04
CCDC65-204ENST00000552188 PHLPP1O60346 1717 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 ADGRF5Q8IZF2 1346 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 PTPRUQ92729 1446 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 NCOA3Q9Y6Q9 1424 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 HSPA1LP34931 641 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 NALCNQ8IZF0 1738 aa8.57□□□□□ -1.04
CCDC65-204ENST00000552188 VASPP50552 380 aaPredicted RBP8.56□□□□□ -1.04
CCDC65-204ENST00000552188 SLAIN2Q9P270 581 aa8.56□□□□□ -1.04
CCDC65-204ENST00000552188 STK26Q9P289 416 aa8.56□□□□□ -1.04
CCDC65-204ENST00000552188 KNDC1Q76NI1 1749 aa8.55□□□□□ -1.04
CCDC65-204ENST00000552188 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
CCDC65-204ENST00000552188 AMER1Q5JTC6 1135 aaPredicted RBP8.55□□□□□ -1.04
CCDC65-204ENST00000552188 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
CCDC65-204ENST00000552188 MYOM2P54296 1465 aa8.54□□□□□ -1.04
CCDC65-204ENST00000552188 DISP3Q9P2K9 1392 aa8.54□□□□□ -1.04
CCDC65-204ENST00000552188 TMEM132EQ6IEE7 984 aa8.54□□□□□ -1.04
CCDC65-204ENST00000552188 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
CCDC65-204ENST00000552188 DHX57Q6P158 1386 aaKnown RBP8.53□□□□□ -1.04
CCDC65-204ENST00000552188 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
CCDC65-204ENST00000552188 STAC3Q96MF2 364 aa8.53□□□□□ -1.04
CCDC65-204ENST00000552188 PIK3C2GO75747 1445 aa8.53□□□□□ -1.04
CCDC65-204ENST00000552188 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
CCDC65-204ENST00000552188 C14orf93Q9H972 538 aaKnown RBP8.52□□□□□ -1.05
CCDC65-204ENST00000552188 DCCP43146 1447 aa8.52□□□□□ -1.05
CCDC65-204ENST00000552188 PTCH1Q13635 1447 aa8.52□□□□□ -1.05
CCDC65-204ENST00000552188 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
CCDC65-204ENST00000552188 ROBO2Q9HCK4 1378 aa8.51□□□□□ -1.05
CCDC65-204ENST00000552188 MIER1Q8N108 512 aa8.51□□□□□ -1.05
CCDC65-204ENST00000552188 POGKQ9P215 609 aa8.51□□□□□ -1.05
CCDC65-204ENST00000552188 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
CCDC65-204ENST00000552188 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
CCDC65-204ENST00000552188 LRPPRCP42704 1394 aaKnown RBP8.5□□□□□ -1.05
CCDC65-204ENST00000552188 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
CCDC65-204ENST00000552188 PLCD3Q8N3E9 789 aa8.5□□□□□ -1.05
CCDC65-204ENST00000552188 KIAA1210Q9ULL0 1709 aa8.5□□□□□ -1.05
CCDC65-204ENST00000552188 ASXL1Q8IXJ9 1541 aa8.49□□□□□ -1.05
CCDC65-204ENST00000552188 ABCC11Q96J66 1382 aa8.49□□□□□ -1.05
CCDC65-204ENST00000552188 MED1Q15648 1581 aaPredicted RBP8.49□□□□□ -1.05
CCDC65-204ENST00000552188 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC65-204ENST00000552188 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
CCDC65-204ENST00000552188 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
CCDC65-204ENST00000552188 NRXN1Q9ULB1 1477 aa8.49□□□□□ -1.05
CCDC65-204ENST00000552188 MST1RQ04912 1400 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 BRINP3Q76B58 766 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 FMN2Q9NZ56 1722 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
CCDC65-204ENST00000552188 AHDC1Q5TGY3 1603 aaPredicted RBP8.47□□□□□ -1.05
CCDC65-204ENST00000552188 PRAG1Q86YV5 1406 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 ARHGEF28Q8N1W1 1705 aaKnown RBP8.47□□□□□ -1.05
CCDC65-204ENST00000552188 NUTM2FA1L443 756 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 ESCO1Q5FWF5 840 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 IFNLR1Q8IU57 520 aaPredicted RBP8.47□□□□□ -1.05
CCDC65-204ENST00000552188 SIRT1Q96EB6 747 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 PRAM1Q96QH2 718 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
CCDC65-204ENST00000552188 JCADQ9P266 1359 aa8.47□□□□□ -1.05
CCDC65-204ENST00000552188 SHPRHQ149N8 1683 aa8.46□□□□□ -1.05
CCDC65-204ENST00000552188 TECPR2O15040 1411 aa8.46□□□□□ -1.05
CCDC65-204ENST00000552188 MEX3CQ5U5Q3 659 aaKnown RBP8.46□□□□□ -1.06
CCDC65-204ENST00000552188 KIF1AQ12756 1690 aa8.46□□□□□ -1.06
CCDC65-204ENST00000552188 C1orf167Q5SNV9 1468 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 KLHL34Q8N239 644 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 L3MBTL2Q969R5 705 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 LRRC59Q96AG4 307 aaKnown RBP8.45□□□□□ -1.06
CCDC65-204ENST00000552188 ITSN1Q15811 1721 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 PLEKHH1Q9ULM0 1364 aa8.45□□□□□ -1.06
CCDC65-204ENST00000552188 TRPM1Q7Z4N2 1603 aa8.44□□□□□ -1.06
CCDC65-204ENST00000552188 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
CCDC65-204ENST00000552188 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
CCDC65-204ENST00000552188 MINK1Q8N4C8 1332 aaPredicted RBP8.44□□□□□ -1.06
CCDC65-204ENST00000552188 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
CCDC65-204ENST00000552188 ADGRB1O14514 1584 aa8.44□□□□□ -1.06
CCDC65-204ENST00000552188 NUTM2BA6NNL0 878 aaPredicted RBP8.43□□□□□ -1.06
CCDC65-204ENST00000552188 NUTM2EB1AL46 878 aaPredicted RBP8.43□□□□□ -1.06
CCDC65-204ENST00000552188 NUTM2AQ8IVF1 878 aaPredicted RBP8.43□□□□□ -1.06
CCDC65-204ENST00000552188 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
CCDC65-204ENST00000552188 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
CCDC65-204ENST00000552188 SPATA31A6Q5VVP1 1343 aa8.42□□□□□ -1.06
CCDC65-204ENST00000552188 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
CCDC65-204ENST00000552188 EIF3AQ14152 1382 aaKnown RBP8.42□□□□□ -1.06
CCDC65-204ENST00000552188 QRICH2Q9H0J4 1663 aa8.42□□□□□ -1.06
CCDC65-204ENST00000552188 ADGRB2O60241 1585 aa8.41□□□□□ -1.06
CCDC65-204ENST00000552188 FOXO3O43524 673 aa8.41□□□□□ -1.06
CCDC65-204ENST00000552188 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
CCDC65-204ENST00000552188 NBPF1Q3BBV0 1214 aa8.41□□□□□ -1.06
CCDC65-204ENST00000552188 CHRDL2Q6WN34 429 aa8.41□□□□□ -1.06
CCDC65-204ENST00000552188 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
CCDC65-204ENST00000552188 PSME1Q06323 249 aa8.4□□□□□ -1.06
CCDC65-204ENST00000552188 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms