RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
PRIM1-206ENST00000550770 BCANQ96GW7 911 aa16.64■□□□□ 0.25
PRIM1-206ENST00000550770 NKTRP30414 1462 aaKnown RBP16.64■□□□□ 0.25
PRIM1-206ENST00000550770 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
PRIM1-206ENST00000550770 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
PRIM1-206ENST00000550770 KIF1BO60333 1816 aa16.63■□□□□ 0.25
PRIM1-206ENST00000550770 TOM1O60784 492 aa16.62■□□□□ 0.25
PRIM1-206ENST00000550770 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
PRIM1-206ENST00000550770 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
PRIM1-206ENST00000550770 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
PRIM1-206ENST00000550770 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
PRIM1-206ENST00000550770 ZNF326Q5BKZ1 582 aaKnown RBP16.61■□□□□ 0.25
PRIM1-206ENST00000550770 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
PRIM1-206ENST00000550770 CHD2O14647 1828 aaKnown RBP16.61■□□□□ 0.25
PRIM1-206ENST00000550770 GSE1Q14687 1217 aa16.6■□□□□ 0.25
PRIM1-206ENST00000550770 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
PRIM1-206ENST00000550770 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
PRIM1-206ENST00000550770 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
PRIM1-206ENST00000550770 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
PRIM1-206ENST00000550770 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
PRIM1-206ENST00000550770 RBM33Q96EV2 1170 aaKnown RBP16.56■□□□□ 0.24
PRIM1-206ENST00000550770 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
PRIM1-206ENST00000550770 KIF12Q96FN5 646 aa16.55■□□□□ 0.24
PRIM1-206ENST00000550770 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
PRIM1-206ENST00000550770 GALR2O43603 387 aaPredicted RBP16.54■□□□□ 0.24
PRIM1-206ENST00000550770 PPLO60437 1756 aa16.54■□□□□ 0.24
PRIM1-206ENST00000550770 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
PRIM1-206ENST00000550770 METP08581 1390 aa16.52■□□□□ 0.24
PRIM1-206ENST00000550770 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.24
PRIM1-206ENST00000550770 HSPA1LP34931 641 aa16.52■□□□□ 0.24
PRIM1-206ENST00000550770 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
PRIM1-206ENST00000550770 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
PRIM1-206ENST00000550770 MS4A3Q96HJ5 214 aa16.51■□□□□ 0.23
PRIM1-206ENST00000550770 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
PRIM1-206ENST00000550770 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
PRIM1-206ENST00000550770 MSH6P52701 1360 aa16.5■□□□□ 0.23
PRIM1-206ENST00000550770 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
PRIM1-206ENST00000550770 MAP3K13O43283 966 aa16.49■□□□□ 0.23
PRIM1-206ENST00000550770 IFT172Q9UG01 1749 aa16.49■□□□□ 0.23
PRIM1-206ENST00000550770 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
PRIM1-206ENST00000550770 HRCP23327 699 aa16.48■□□□□ 0.23
PRIM1-206ENST00000550770 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
PRIM1-206ENST00000550770 SGIP1Q9BQI5 828 aa16.46■□□□□ 0.23
PRIM1-206ENST00000550770 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
PRIM1-206ENST00000550770 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
PRIM1-206ENST00000550770 ANKRD30BQ9BXX2 1392 aa16.45■□□□□ 0.22
PRIM1-206ENST00000550770 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
PRIM1-206ENST00000550770 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
PRIM1-206ENST00000550770 PYGBP11216 843 aa16.44■□□□□ 0.22
PRIM1-206ENST00000550770 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
PRIM1-206ENST00000550770 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
PRIM1-206ENST00000550770 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
PRIM1-206ENST00000550770 C14orf37Q86TY3 774 aa16.42■□□□□ 0.22
PRIM1-206ENST00000550770 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
PRIM1-206ENST00000550770 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
PRIM1-206ENST00000550770 SLAIN2Q9P270 581 aa16.41■□□□□ 0.22
PRIM1-206ENST00000550770 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
PRIM1-206ENST00000550770 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
PRIM1-206ENST00000550770 DCCP43146 1447 aa16.4■□□□□ 0.22
PRIM1-206ENST00000550770 MYOM2P54296 1465 aa16.4■□□□□ 0.22
PRIM1-206ENST00000550770 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
PRIM1-206ENST00000550770 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
PRIM1-206ENST00000550770 ADGRL3Q9HAR2 1447 aa16.39■□□□□ 0.21
PRIM1-206ENST00000550770 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
PRIM1-206ENST00000550770 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-206ENST00000550770 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
PRIM1-206ENST00000550770 ATF3P18847 181 aa16.37■□□□□ 0.21
PRIM1-206ENST00000550770 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
PRIM1-206ENST00000550770 MST1RQ04912 1400 aa16.36■□□□□ 0.21
PRIM1-206ENST00000550770 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
PRIM1-206ENST00000550770 TECPR2O15040 1411 aa16.35■□□□□ 0.21
PRIM1-206ENST00000550770 LAMC1P11047 1609 aa16.34■□□□□ 0.21
PRIM1-206ENST00000550770 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
PRIM1-206ENST00000550770 COL16A1Q07092 1604 aaPredicted RBP16.33■□□□□ 0.2
PRIM1-206ENST00000550770 PHLPP1O60346 1717 aa16.33■□□□□ 0.2
PRIM1-206ENST00000550770 KNDC1Q76NI1 1749 aa16.33■□□□□ 0.2
PRIM1-206ENST00000550770 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
PRIM1-206ENST00000550770 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
PRIM1-206ENST00000550770 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
PRIM1-206ENST00000550770 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
PRIM1-206ENST00000550770 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
PRIM1-206ENST00000550770 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
PRIM1-206ENST00000550770 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
PRIM1-206ENST00000550770 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
PRIM1-206ENST00000550770 TIE1P35590 1138 aa16.29■□□□□ 0.2
PRIM1-206ENST00000550770 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
PRIM1-206ENST00000550770 STK26Q9P289 416 aa16.29■□□□□ 0.2
PRIM1-206ENST00000550770 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
PRIM1-206ENST00000550770 ILDR2Q71H61 639 aa16.28■□□□□ 0.2
PRIM1-206ENST00000550770 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
PRIM1-206ENST00000550770 ADGRB1O14514 1584 aa16.28■□□□□ 0.2
PRIM1-206ENST00000550770 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
PRIM1-206ENST00000550770 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
PRIM1-206ENST00000550770 NHSL1Q5SYE7 1610 aa16.27■□□□□ 0.2
PRIM1-206ENST00000550770 ASTLQ6HA08 431 aaPredicted RBP16.27■□□□□ 0.2
PRIM1-206ENST00000550770 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
PRIM1-206ENST00000550770 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
PRIM1-206ENST00000550770 JCADQ9P266 1359 aa16.26■□□□□ 0.19
PRIM1-206ENST00000550770 ATMINO43313 823 aaPredicted RBP16.25■□□□□ 0.19
PRIM1-206ENST00000550770 TRPC6Q9Y210 931 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms