RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
PDE1B-207ENST00000550620 CCDC27Q2M243 656 aa19.17■□□□□ 0.66
PDE1B-207ENST00000550620 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
PDE1B-207ENST00000550620 POGKQ9P215 609 aa19.17■□□□□ 0.66
PDE1B-207ENST00000550620 ADGRF5Q8IZF2 1346 aa19.17■□□□□ 0.66
PDE1B-207ENST00000550620 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
PDE1B-207ENST00000550620 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
PDE1B-207ENST00000550620 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
PDE1B-207ENST00000550620 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
PDE1B-207ENST00000550620 PDZRN3Q9UPQ7 1066 aa19.15■□□□□ 0.66
PDE1B-207ENST00000550620 PCDHB15Q9Y5E8 787 aa19.15■□□□□ 0.66
PDE1B-207ENST00000550620 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
PDE1B-207ENST00000550620 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
PDE1B-207ENST00000550620 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
PDE1B-207ENST00000550620 ATP7AQ04656 1500 aa19.14■□□□□ 0.66
PDE1B-207ENST00000550620 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.66
PDE1B-207ENST00000550620 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
PDE1B-207ENST00000550620 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
PDE1B-207ENST00000550620 KIF3BO15066 747 aa19.13■□□□□ 0.65
PDE1B-207ENST00000550620 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
PDE1B-207ENST00000550620 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
PDE1B-207ENST00000550620 TBC1D2Q9BYX2 928 aa19.12■□□□□ 0.65
PDE1B-207ENST00000550620 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
PDE1B-207ENST00000550620 RLBP1P12271 317 aa19.12■□□□□ 0.65
PDE1B-207ENST00000550620 IFT172Q9UG01 1749 aa19.1■□□□□ 0.65
PDE1B-207ENST00000550620 KIF1BO60333 1816 aa19.1■□□□□ 0.65
PDE1B-207ENST00000550620 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
PDE1B-207ENST00000550620 UGGT1Q9NYU2 1555 aa19.1■□□□□ 0.65
PDE1B-207ENST00000550620 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
PDE1B-207ENST00000550620 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
PDE1B-207ENST00000550620 USP32Q8NFA0 1604 aa19.09■□□□□ 0.65
PDE1B-207ENST00000550620 EFCAB6Q5THR3 1501 aa19.09■□□□□ 0.65
PDE1B-207ENST00000550620 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.64
PDE1B-207ENST00000550620 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.64
PDE1B-207ENST00000550620 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.64
PDE1B-207ENST00000550620 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
PDE1B-207ENST00000550620 BCL2L13Q9BXK5 485 aa19.07■□□□□ 0.64
PDE1B-207ENST00000550620 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
PDE1B-207ENST00000550620 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
PDE1B-207ENST00000550620 MTHFSP49914 203 aa19.06■□□□□ 0.64
PDE1B-207ENST00000550620 TNNQ9UQP3 1299 aa19.06■□□□□ 0.64
PDE1B-207ENST00000550620 FANCAO15360 1455 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 NSD2O96028 1365 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 DZIP1LQ8IYY4 767 aaKnown RBP19.05■□□□□ 0.64
PDE1B-207ENST00000550620 SLC12A5Q9H2X9 1139 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 NOS1P29475 1434 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 GOLGA6L3A6NEY3 463 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 CHMP5Q9NZZ3 219 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 ADGRB3O60242 1522 aa19.05■□□□□ 0.64
PDE1B-207ENST00000550620 MCM4P33991 863 aa19.04■□□□□ 0.64
PDE1B-207ENST00000550620 LMTK2Q8IWU2 1503 aa19.04■□□□□ 0.64
PDE1B-207ENST00000550620 C22orf23Q9BZE7 217 aa19.03■□□□□ 0.64
PDE1B-207ENST00000550620 TRAK1Q9UPV9 953 aa19.03■□□□□ 0.64
PDE1B-207ENST00000550620 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
PDE1B-207ENST00000550620 MROH2AA6NES4 1674 aa19.03■□□□□ 0.64
PDE1B-207ENST00000550620 PUS7Q96PZ0 661 aaKnown RBP19.03■□□□□ 0.64
PDE1B-207ENST00000550620 ZC3H13Q5T200 1668 aaKnown RBP19.02■□□□□ 0.63
PDE1B-207ENST00000550620 HDAC1Q13547 482 aaPredicted RBP19.02■□□□□ 0.63
PDE1B-207ENST00000550620 C14orf93Q9H972 538 aaKnown RBP19.02■□□□□ 0.63
PDE1B-207ENST00000550620 QRICH2Q9H0J4 1663 aa19.01■□□□□ 0.63
PDE1B-207ENST00000550620 ADGRB2O60241 1585 aa19.01■□□□□ 0.63
PDE1B-207ENST00000550620 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
PDE1B-207ENST00000550620 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.63
PDE1B-207ENST00000550620 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
PDE1B-207ENST00000550620 FSD2A1L4K1 749 aa19■□□□□ 0.63
PDE1B-207ENST00000550620 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
PDE1B-207ENST00000550620 MFAP1P55081 439 aaKnown RBP18.99■□□□□ 0.63
PDE1B-207ENST00000550620 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
PDE1B-207ENST00000550620 ANKRD36BQ8N2N9 1353 aa18.99■□□□□ 0.63
PDE1B-207ENST00000550620 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
PDE1B-207ENST00000550620 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
PDE1B-207ENST00000550620 HSCBQ8IWL3 235 aa18.98■□□□□ 0.63
PDE1B-207ENST00000550620 UBE2Q2Q8WVN8 375 aa18.98■□□□□ 0.63
PDE1B-207ENST00000550620 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
PDE1B-207ENST00000550620 RPGRIP1LQ68CZ1 1315 aa18.97■□□□□ 0.63
PDE1B-207ENST00000550620 EVC2Q86UK5 1308 aa18.96■□□□□ 0.63
PDE1B-207ENST00000550620 DDX11L8A8MPP1 907 aa18.96■□□□□ 0.63
PDE1B-207ENST00000550620 XRCC6P12956 609 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDE1B-207ENST00000550620 SPRYD3Q8NCJ5 442 aa18.96■□□□□ 0.63
PDE1B-207ENST00000550620 TRAK2O60296 914 aa18.95■□□□□ 0.62
PDE1B-207ENST00000550620 TRIM27P14373 513 aa18.95■□□□□ 0.62
PDE1B-207ENST00000550620 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
PDE1B-207ENST00000550620 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
PDE1B-207ENST00000550620 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
PDE1B-207ENST00000550620 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
PDE1B-207ENST00000550620 ABCC11Q96J66 1382 aa18.94■□□□□ 0.62
PDE1B-207ENST00000550620 IL16Q14005 1332 aa18.94■□□□□ 0.62
PDE1B-207ENST00000550620 MRE11P49959 708 aa18.93■□□□□ 0.62
PDE1B-207ENST00000550620 EXOSC9Q06265 439 aaKnown RBP18.93■□□□□ 0.62
PDE1B-207ENST00000550620 PPLO60437 1756 aa18.92■□□□□ 0.62
PDE1B-207ENST00000550620 TSR2Q969E8 191 aaKnown RBP18.92■□□□□ 0.62
PDE1B-207ENST00000550620 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
PDE1B-207ENST00000550620 KIF16BQ96L93 1317 aa18.91■□□□□ 0.62
PDE1B-207ENST00000550620 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
PDE1B-207ENST00000550620 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
PDE1B-207ENST00000550620 TMEM132EQ6IEE7 984 aa18.91■□□□□ 0.62
PDE1B-207ENST00000550620 ARXQ96QS3 562 aa18.91■□□□□ 0.62
PDE1B-207ENST00000550620 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
PDE1B-207ENST00000550620 SNX21Q969T3 373 aa18.9■□□□□ 0.62
PDE1B-207ENST00000550620 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms