RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-223ENST00000550442 C8orf37Q96NL8 207 aa16.09■□□□□ 0.17
LETMD1-223ENST00000550442 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
LETMD1-223ENST00000550442 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.17
LETMD1-223ENST00000550442 IDI1Q13907 227 aa16.08■□□□□ 0.16
LETMD1-223ENST00000550442 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.16
LETMD1-223ENST00000550442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.163e-14■□□□□ 10.9
LETMD1-223ENST00000550442 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
LETMD1-223ENST00000550442 INSRP06213 1382 aa16.07■□□□□ 0.16
LETMD1-223ENST00000550442 C19orf44Q9H6X5 657 aa16.06■□□□□ 0.16
LETMD1-223ENST00000550442 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
LETMD1-223ENST00000550442 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
LETMD1-223ENST00000550442 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
LETMD1-223ENST00000550442 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
LETMD1-223ENST00000550442 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
LETMD1-223ENST00000550442 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
LETMD1-223ENST00000550442 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
LETMD1-223ENST00000550442 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
LETMD1-223ENST00000550442 TMF1P82094 1093 aa16.02■□□□□ 0.16
LETMD1-223ENST00000550442 CCDC125Q86Z20 511 aa16.02■□□□□ 0.16
LETMD1-223ENST00000550442 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
LETMD1-223ENST00000550442 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.15
LETMD1-223ENST00000550442 EIF3AQ14152 1382 aaKnown RBP16.01■□□□□ 0.15
LETMD1-223ENST00000550442 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
LETMD1-223ENST00000550442 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
LETMD1-223ENST00000550442 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
LETMD1-223ENST00000550442 E9PCH4 1651 aa16■□□□□ 0.15
LETMD1-223ENST00000550442 HNRNPUQ00839 825 aaKnown RBP eCLIP16■□□□□ 0.15
LETMD1-223ENST00000550442 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
LETMD1-223ENST00000550442 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
LETMD1-223ENST00000550442 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
LETMD1-223ENST00000550442 MYOM2P54296 1465 aa15.98■□□□□ 0.15
LETMD1-223ENST00000550442 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
LETMD1-223ENST00000550442 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
LETMD1-223ENST00000550442 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
LETMD1-223ENST00000550442 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-223ENST00000550442 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
LETMD1-223ENST00000550442 MYO5BQ9ULV0 1848 aa15.96■□□□□ 0.14
LETMD1-223ENST00000550442 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 RIMS2Q9UQ26 1411 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 LRP5O75197 1615 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 USP21Q9UK80 565 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 PNPLA6Q8IY17 1366 aa15.95■□□□□ 0.14
LETMD1-223ENST00000550442 NOS1P29475 1434 aa15.94■□□□□ 0.14
LETMD1-223ENST00000550442 DCCP43146 1447 aa15.94■□□□□ 0.14
LETMD1-223ENST00000550442 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
LETMD1-223ENST00000550442 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
LETMD1-223ENST00000550442 EP400Q96L91 3159 aa15.93■□□□□ 0.14
LETMD1-223ENST00000550442 NLRP13Q86W25 1043 aa15.93■□□□□ 0.14
LETMD1-223ENST00000550442 TESK2Q96S53 571 aa15.93■□□□□ 0.14
LETMD1-223ENST00000550442 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
LETMD1-223ENST00000550442 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
LETMD1-223ENST00000550442 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
LETMD1-223ENST00000550442 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
LETMD1-223ENST00000550442 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
LETMD1-223ENST00000550442 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
LETMD1-223ENST00000550442 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
LETMD1-223ENST00000550442 MST1RQ04912 1400 aa15.89■□□□□ 0.13
LETMD1-223ENST00000550442 PER1O15534 1290 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-223ENST00000550442 LRPPRCP42704 1394 aaKnown RBP15.88■□□□□ 0.13
LETMD1-223ENST00000550442 ATRNO75882 1429 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 ADAMTS13Q76LX8 1427 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 CLTCL1P53675 1640 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 FKBP8Q14318 412 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 NBPF1Q3BBV0 1214 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 AMOTL2Q9Y2J4 779 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 KIF1BO60333 1816 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 NRXN1Q9ULB1 1477 aa15.88■□□□□ 0.13
LETMD1-223ENST00000550442 FAM9BQ8IZU0 186 aa15.87■□□□□ 0.13
LETMD1-223ENST00000550442 BLMP54132 1417 aaPredicted RBP15.86■□□□□ 0.13
LETMD1-223ENST00000550442 SMG6Q86US8 1419 aaKnown RBP15.86■□□□□ 0.13
LETMD1-223ENST00000550442 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
LETMD1-223ENST00000550442 FNBP4Q8N3X1 1017 aaPredicted RBP15.86■□□□□ 0.13
LETMD1-223ENST00000550442 DDX17Q92841 729 aaKnown RBP15.86■□□□□ 0.13
LETMD1-223ENST00000550442 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
LETMD1-223ENST00000550442 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
LETMD1-223ENST00000550442 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
LETMD1-223ENST00000550442 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
LETMD1-223ENST00000550442 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
LETMD1-223ENST00000550442 DEFB132Q7Z7B7 95 aa15.81■□□□□ 0.12
LETMD1-223ENST00000550442 PTPRUQ92729 1446 aa15.81■□□□□ 0.12
LETMD1-223ENST00000550442 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
LETMD1-223ENST00000550442 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
LETMD1-223ENST00000550442 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
LETMD1-223ENST00000550442 CCDC184Q52MB2 194 aa15.79■□□□□ 0.12
LETMD1-223ENST00000550442 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
LETMD1-223ENST00000550442 PPP4R2Q9NY27 417 aa15.79■□□□□ 0.12
LETMD1-223ENST00000550442 XRN1Q8IZH2 1706 aaKnown RBP15.79■□□□□ 0.12
LETMD1-223ENST00000550442 IFT172Q9UG01 1749 aa15.79■□□□□ 0.12
LETMD1-223ENST00000550442 PANK3Q9H999 370 aa15.78■□□□□ 0.12
LETMD1-223ENST00000550442 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
LETMD1-223ENST00000550442 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
LETMD1-223ENST00000550442 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
LETMD1-223ENST00000550442 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-223ENST00000550442 YY1P25490 414 aa15.76■□□□□ 0.11
LETMD1-223ENST00000550442 MARF1Q9Y4F3 1742 aaKnown RBP15.76■□□□□ 0.11
LETMD1-223ENST00000550442 COL22A1Q8NFW1 1626 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-223ENST00000550442 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
LETMD1-223ENST00000550442 BCL9LQ86UU0 1499 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms