RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 FUT2Q10981 343 aa10.1□□□□□ -0.79
HCFC2-204ENST00000550335 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
HCFC2-204ENST00000550335 SYMPKQ92797 1274 aaKnown RBP10.1□□□□□ -0.79
HCFC2-204ENST00000550335 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 SOCS7O14512 581 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 CFHP08603 1231 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 IRF5Q13568 498 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 WASHC4Q2M389 1173 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
HCFC2-204ENST00000550335 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 NPM2Q86SE8 214 aaKnown RBP10.09□□□□□ -0.79
HCFC2-204ENST00000550335 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
HCFC2-204ENST00000550335 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
HCFC2-204ENST00000550335 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
HCFC2-204ENST00000550335 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
HCFC2-204ENST00000550335 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
HCFC2-204ENST00000550335 EPS8L1Q8TE68 723 aa10.06□□□□□ -0.8
HCFC2-204ENST00000550335 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
HCFC2-204ENST00000550335 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
HCFC2-204ENST00000550335 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
HCFC2-204ENST00000550335 NR6A1Q15406 480 aa10.04□□□□□ -0.8
HCFC2-204ENST00000550335 ADAMTS19Q8TE59 1207 aa10.04□□□□□ -0.8
HCFC2-204ENST00000550335 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
HCFC2-204ENST00000550335 KMT5BQ4FZB7 885 aa10.03□□□□□ -0.8
HCFC2-204ENST00000550335 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
HCFC2-204ENST00000550335 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
HCFC2-204ENST00000550335 POTEEQ6S8J3 1075 aa10.02□□□□□ -0.81
HCFC2-204ENST00000550335 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
HCFC2-204ENST00000550335 PDE4CQ08493 712 aa10□□□□□ -0.81
HCFC2-204ENST00000550335 CDCA8Q53HL2 280 aa10□□□□□ -0.81
HCFC2-204ENST00000550335 PBXIP1Q96AQ6 731 aa10□□□□□ -0.81
HCFC2-204ENST00000550335 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
HCFC2-204ENST00000550335 NBPF3Q9H094 633 aa10□□□□□ -0.81
HCFC2-204ENST00000550335 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
HCFC2-204ENST00000550335 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
HCFC2-204ENST00000550335 SEMA3FQ13275 785 aa9.99□□□□□ -0.81
HCFC2-204ENST00000550335 PNMA1Q8ND90 353 aa9.99□□□□□ -0.81
HCFC2-204ENST00000550335 PPP1R12CQ9BZL4 782 aa9.99□□□□□ -0.81
HCFC2-204ENST00000550335 GZF1Q9H116 711 aaPredicted RBP9.99□□□□□ -0.81
HCFC2-204ENST00000550335 EMP3P54852 163 aa9.98□□□□□ -0.81
HCFC2-204ENST00000550335 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
HCFC2-204ENST00000550335 GPR37L1O60883 481 aa9.97□□□□□ -0.81
HCFC2-204ENST00000550335 CFAP70Q5T0N1 1121 aa9.97□□□□□ -0.81
HCFC2-204ENST00000550335 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
HCFC2-204ENST00000550335 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
HCFC2-204ENST00000550335 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
HCFC2-204ENST00000550335 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
HCFC2-204ENST00000550335 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
HCFC2-204ENST00000550335 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
HCFC2-204ENST00000550335 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
HCFC2-204ENST00000550335 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
HCFC2-204ENST00000550335 OTUD5Q96G74 571 aa9.96□□□□□ -0.82
HCFC2-204ENST00000550335 LRCH3Q96II8 777 aa9.96□□□□□ -0.82
HCFC2-204ENST00000550335 ALG2Q9H553 416 aa9.96□□□□□ -0.82
HCFC2-204ENST00000550335 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
HCFC2-204ENST00000550335 PBX2P40425 430 aa9.95□□□□□ -0.82
HCFC2-204ENST00000550335 Q3C1V9 767 aa9.95□□□□□ -0.82
HCFC2-204ENST00000550335 MORN1Q5T089 497 aa9.95□□□□□ -0.82
HCFC2-204ENST00000550335 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
HCFC2-204ENST00000550335 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
HCFC2-204ENST00000550335 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
HCFC2-204ENST00000550335 ACTN4O43707 911 aaKnown RBP9.92□□□□□ -0.82
HCFC2-204ENST00000550335 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
HCFC2-204ENST00000550335 TMCO4Q5TGY1 634 aa9.92□□□□□ -0.82
HCFC2-204ENST00000550335 ZNF687Q8N1G0 1237 aa9.92□□□□□ -0.82
HCFC2-204ENST00000550335 SOX11P35716 441 aa9.91□□□□□ -0.82
HCFC2-204ENST00000550335 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
HCFC2-204ENST00000550335 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
HCFC2-204ENST00000550335 ST18O60284 1047 aa9.9□□□□□ -0.82
HCFC2-204ENST00000550335 PPP4CP60510 307 aa9.9□□□□□ -0.82
HCFC2-204ENST00000550335 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
HCFC2-204ENST00000550335 UCN2Q96RP3 112 aa9.9□□□□□ -0.82
HCFC2-204ENST00000550335 CTHP32929 405 aa9.89□□□□□ -0.83
HCFC2-204ENST00000550335 LYPD8Q6UX82 237 aa9.89□□□□□ -0.83
HCFC2-204ENST00000550335 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
HCFC2-204ENST00000550335 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
HCFC2-204ENST00000550335 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
HCFC2-204ENST00000550335 NR1H3Q13133 447 aa9.87□□□□□ -0.83
HCFC2-204ENST00000550335 PRR14Q9BWN1 585 aa9.87□□□□□ -0.83
HCFC2-204ENST00000550335 HPS5Q9UPZ3 1129 aa9.87□□□□□ -0.83
HCFC2-204ENST00000550335 DESI1Q6ICB0 168 aa9.86□□□□□ -0.83
HCFC2-204ENST00000550335 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
HCFC2-204ENST00000550335 MAFBQ9Y5Q3 323 aaPredicted RBP9.86□□□□□ -0.83
HCFC2-204ENST00000550335 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
HCFC2-204ENST00000550335 BRD1O95696 1058 aa9.85□□□□□ -0.83
HCFC2-204ENST00000550335 FBXO45P0C2W1 286 aa9.85□□□□□ -0.83
HCFC2-204ENST00000550335 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
HCFC2-204ENST00000550335 SCUBE3Q8IX30 993 aa9.85□□□□□ -0.83
HCFC2-204ENST00000550335 ANKK1Q8NFD2 765 aa9.85□□□□□ -0.83
HCFC2-204ENST00000550335 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 PATL2C9JE40 543 aaKnown RBP9.84□□□□□ -0.83
HCFC2-204ENST00000550335 TK2O00142 265 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 ATP9BO43861 1147 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 BCAMP50895 628 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 MFAP1P55081 439 aaKnown RBP9.84□□□□□ -0.83
HCFC2-204ENST00000550335 BRICD5Q6PL45 260 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 FAM163AQ96GL9 167 aaPredicted RBP9.84□□□□□ -0.83
HCFC2-204ENST00000550335 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 MAP10Q9P2G4 905 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 FKBPLQ9UIM3 349 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms