RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
VDR-208ENST00000550325 CD2BP2O95400 341 aaKnown RBP15.07■□□□□ 0
VDR-208ENST00000550325 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
VDR-208ENST00000550325 RNF214Q8ND24 703 aa15.07■□□□□ 0
VDR-208ENST00000550325 RUNDC1Q96C34 613 aa15.07■□□□□ 0
VDR-208ENST00000550325 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
VDR-208ENST00000550325 ADGRL2O95490 1459 aa15.06■□□□□ 0
VDR-208ENST00000550325 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
VDR-208ENST00000550325 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
VDR-208ENST00000550325 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ 0
VDR-208ENST00000550325 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
VDR-208ENST00000550325 K7ELQ4 463 aaPredicted RBP15.04■□□□□ -0
VDR-208ENST00000550325 PTMSP20962 102 aa15.04■□□□□ -0
VDR-208ENST00000550325 RBM27Q9P2N5 1060 aaKnown RBP15.04■□□□□ -0
VDR-208ENST00000550325 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
VDR-208ENST00000550325 ADGBQ8N7X0 1667 aa15.04■□□□□ -0
VDR-208ENST00000550325 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
VDR-208ENST00000550325 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
VDR-208ENST00000550325 SMC5Q8IY18 1101 aa15.04■□□□□ -0
VDR-208ENST00000550325 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
VDR-208ENST00000550325 CIZ1Q9ULV3 898 aaPredicted RBP15.03■□□□□ -0
VDR-208ENST00000550325 BAG4O95429 457 aaKnown RBP15.03■□□□□ -0
VDR-208ENST00000550325 ASXL1Q8IXJ9 1541 aa15.03■□□□□ -0
VDR-208ENST00000550325 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
VDR-208ENST00000550325 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
VDR-208ENST00000550325 CARD14Q9BXL6 1004 aa15.03■□□□□ -0
VDR-208ENST00000550325 CEP170Q5SW79 1584 aa15.03■□□□□ -0
VDR-208ENST00000550325 FAM135AQ9P2D6 1515 aa15.02■□□□□ -0
VDR-208ENST00000550325 TRIM27P14373 513 aa15.02■□□□□ -0
VDR-208ENST00000550325 AAMPQ13685 434 aa15.02■□□□□ -0
VDR-208ENST00000550325 MAP7D2Q96T17 732 aa15.02■□□□□ -0
VDR-208ENST00000550325 NOB1Q9ULX3 412 aaKnown RBP15.02■□□□□ -0
VDR-208ENST00000550325 PIK3C2GO75747 1445 aa15.02■□□□□ -0
VDR-208ENST00000550325 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
VDR-208ENST00000550325 DDX19BQ9UMR2 479 aa15.02■□□□□ -0
VDR-208ENST00000550325 FOXD4L6Q3SYB3 417 aaPredicted RBP15.02□□□□□ -0.01
VDR-208ENST00000550325 FOXD4L3Q6VB84 417 aaPredicted RBP15.02□□□□□ -0.01
VDR-208ENST00000550325 PPP1R9BQ96SB3 815 aa15.02□□□□□ -0.01
VDR-208ENST00000550325 PRDM4Q9UKN5 801 aa15.02□□□□□ -0.01
VDR-208ENST00000550325 MTHFSP49914 203 aa15.01□□□□□ -0.01
VDR-208ENST00000550325 CFAP53Q96M91 514 aa15.01□□□□□ -0.01
VDR-208ENST00000550325 CHGAP10645 457 aaKnown RBP15.01□□□□□ -0.01
VDR-208ENST00000550325 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
VDR-208ENST00000550325 RBSNQ9H1K0 784 aa15.01□□□□□ -0.01
VDR-208ENST00000550325 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
VDR-208ENST00000550325 NGEFQ8N5V2 710 aa15□□□□□ -0.01
VDR-208ENST00000550325 KLHL40Q2TBA0 621 aa15□□□□□ -0.01
VDR-208ENST00000550325 ZSCAN23Q3MJ62 389 aa15□□□□□ -0.01
VDR-208ENST00000550325 TSC1Q92574 1164 aa15□□□□□ -0.01
VDR-208ENST00000550325 CHAMP1Q96JM3 812 aa15□□□□□ -0.01
VDR-208ENST00000550325 SNX21Q969T3 373 aa15□□□□□ -0.01
VDR-208ENST00000550325 RAPGEF6Q8TEU7 1601 aa15□□□□□ -0.01
VDR-208ENST00000550325 VIRMAQ69YN4 1812 aaKnown RBP15□□□□□ -0.01
VDR-208ENST00000550325 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
VDR-208ENST00000550325 SSH1Q8WYL5 1049 aa14.99□□□□□ -0.01
VDR-208ENST00000550325 JARID2Q92833 1246 aaPredicted RBP14.99□□□□□ -0.01
VDR-208ENST00000550325 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
VDR-208ENST00000550325 FAM177BA6PVY3 158 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 APBB1O00213 710 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 CHD1LQ86WJ1 897 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
VDR-208ENST00000550325 SYCE3A1L190 88 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
VDR-208ENST00000550325 CBX1P83916 185 aa14.97□□□□□ -0.01
VDR-208ENST00000550325 ATF7IPQ6VMQ6 1270 aa14.97□□□□□ -0.01
VDR-208ENST00000550325 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
VDR-208ENST00000550325 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
VDR-208ENST00000550325 SLC12A5Q9H2X9 1139 aa14.97□□□□□ -0.01
VDR-208ENST00000550325 PKP1Q13835 747 aa14.97□□□□□ -0.01
VDR-208ENST00000550325 ITSN2Q9NZM3 1697 aa14.96□□□□□ -0.01
VDR-208ENST00000550325 DISP1Q96F81 1524 aa14.96□□□□□ -0.01
VDR-208ENST00000550325 TBC1D9Q6ZT07 1266 aa14.96□□□□□ -0.01
VDR-208ENST00000550325 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
VDR-208ENST00000550325 PLA2R1Q13018 1463 aa14.96□□□□□ -0.01
VDR-208ENST00000550325 DDIT3P35638 169 aa14.96□□□□□ -0.02
VDR-208ENST00000550325 NOL8Q76FK4 1167 aaKnown RBP14.96□□□□□ -0.02
VDR-208ENST00000550325 CSPP1Q1MSJ5 1256 aa14.95□□□□□ -0.02
VDR-208ENST00000550325 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
VDR-208ENST00000550325 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
VDR-208ENST00000550325 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
VDR-208ENST00000550325 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
VDR-208ENST00000550325 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
VDR-208ENST00000550325 ABCC2Q92887 1545 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
VDR-208ENST00000550325 NUCB1Q02818 461 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 SASS6Q6UVJ0 657 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 KIAA0556O60303 1618 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 DYNC1I1O14576 645 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
VDR-208ENST00000550325 CCDC39Q9UFE4 941 aa14.92□□□□□ -0.02
VDR-208ENST00000550325 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
VDR-208ENST00000550325 SMAP1Q8IYB5 467 aaPredicted RBP14.92□□□□□ -0.02
VDR-208ENST00000550325 KIF2CQ99661 725 aa14.92□□□□□ -0.02
VDR-208ENST00000550325 IGSF3O75054 1194 aa14.91□□□□□ -0.02
VDR-208ENST00000550325 NUCB2P80303 420 aa14.91□□□□□ -0.02
VDR-208ENST00000550325 PTPRGP23470 1445 aa14.91□□□□□ -0.02
VDR-208ENST00000550325 CLASP1Q7Z460 1538 aa14.91□□□□□ -0.02
VDR-208ENST00000550325 SAFB2Q14151 953 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms