RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 HPS1Q92902 700 aa8.72□□□□□ -1.01
KRR1-203ENST00000550023 SMARCA2P51531 1590 aa8.72□□□□□ -1.01
KRR1-203ENST00000550023 GDF11O95390 407 aa8.71□□□□□ -1.02
KRR1-203ENST00000550023 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
KRR1-203ENST00000550023 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
KRR1-203ENST00000550023 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
KRR1-203ENST00000550023 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
KRR1-203ENST00000550023 SLC10A3P09131 477 aa8.69□□□□□ -1.02
KRR1-203ENST00000550023 MRGPRX2Q96LB1 330 aa8.69□□□□□ -1.02
KRR1-203ENST00000550023 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
KRR1-203ENST00000550023 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
KRR1-203ENST00000550023 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
KRR1-203ENST00000550023 RASSF7Q02833 373 aa8.66□□□□□ -1.02
KRR1-203ENST00000550023 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
KRR1-203ENST00000550023 GSK3AP49840 483 aa8.65□□□□□ -1.02
KRR1-203ENST00000550023 TRIM32Q13049 653 aa8.65□□□□□ -1.02
KRR1-203ENST00000550023 E2F4Q16254 413 aa8.65□□□□□ -1.02
KRR1-203ENST00000550023 XP32Q5T750 250 aa8.64□□□□□ -1.03
KRR1-203ENST00000550023 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
KRR1-203ENST00000550023 EEA1Q15075 1411 aa8.63□□□□□ -1.03
KRR1-203ENST00000550023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.62□□□□□ -1.03
KRR1-203ENST00000550023 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
KRR1-203ENST00000550023 CCDC88BA6NC98 1476 aa8.62□□□□□ -1.03
KRR1-203ENST00000550023 IGHA1P01876 353 aa8.61□□□□□ -1.03
KRR1-203ENST00000550023 BMP1P13497 986 aa8.61□□□□□ -1.03
KRR1-203ENST00000550023 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
KRR1-203ENST00000550023 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
KRR1-203ENST00000550023 ATAD2BQ9ULI0 1458 aa8.59□□□□□ -1.03
KRR1-203ENST00000550023 MORN1Q5T089 497 aa8.59□□□□□ -1.03
KRR1-203ENST00000550023 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
KRR1-203ENST00000550023 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
KRR1-203ENST00000550023 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
KRR1-203ENST00000550023 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
KRR1-203ENST00000550023 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
KRR1-203ENST00000550023 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
KRR1-203ENST00000550023 FECHP22830 423 aa8.57□□□□□ -1.04
KRR1-203ENST00000550023 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
KRR1-203ENST00000550023 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
KRR1-203ENST00000550023 RC3H1Q5TC82 1133 aaKnown RBP8.56□□□□□ -1.04
KRR1-203ENST00000550023 BAZ1BQ9UIG0 1483 aaKnown RBP8.56□□□□□ -1.04
KRR1-203ENST00000550023 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
KRR1-203ENST00000550023 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
KRR1-203ENST00000550023 FUT2Q10981 343 aa8.53□□□□□ -1.04
KRR1-203ENST00000550023 PTGDRQ13258 359 aa8.53□□□□□ -1.04
KRR1-203ENST00000550023 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
KRR1-203ENST00000550023 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
KRR1-203ENST00000550023 WNT7BP56706 349 aa8.52□□□□□ -1.05
KRR1-203ENST00000550023 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
KRR1-203ENST00000550023 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
KRR1-203ENST00000550023 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
KRR1-203ENST00000550023 WASF2Q9Y6W5 498 aa8.52□□□□□ -1.05
KRR1-203ENST00000550023 FOXK2Q01167 660 aa8.51□□□□□ -1.05
KRR1-203ENST00000550023 BRICD5Q6PL45 260 aa8.51□□□□□ -1.05
KRR1-203ENST00000550023 RDH13Q8NBN7 331 aa8.51□□□□□ -1.05
KRR1-203ENST00000550023 ADAMTS8Q9UP79 889 aa8.51□□□□□ -1.05
KRR1-203ENST00000550023 WRNQ14191 1432 aaPredicted RBP eCLIP8.51□□□□□ -1.05
KRR1-203ENST00000550023 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
KRR1-203ENST00000550023 OATP04181 439 aa8.5□□□□□ -1.05
KRR1-203ENST00000550023 HRCP23327 699 aa8.5□□□□□ -1.05
KRR1-203ENST00000550023 KIF21BO75037 1637 aa8.5□□□□□ -1.05
KRR1-203ENST00000550023 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
KRR1-203ENST00000550023 SCARF1Q14162 830 aa8.49□□□□□ -1.05
KRR1-203ENST00000550023 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
KRR1-203ENST00000550023 MMP16P51512 607 aa8.46□□□□□ -1.06
KRR1-203ENST00000550023 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
KRR1-203ENST00000550023 SYNJ1O43426 1573 aa8.46□□□□□ -1.06
KRR1-203ENST00000550023 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
KRR1-203ENST00000550023 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
KRR1-203ENST00000550023 SKOR1P84550 965 aa8.45□□□□□ -1.06
KRR1-203ENST00000550023 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
KRR1-203ENST00000550023 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
KRR1-203ENST00000550023 IRS1P35568 1242 aa8.44□□□□□ -1.06
KRR1-203ENST00000550023 Q3C1V9 767 aa8.44□□□□□ -1.06
KRR1-203ENST00000550023 RNF19BQ6ZMZ0 732 aa8.44□□□□□ -1.06
KRR1-203ENST00000550023 CEP164Q9UPV0 1460 aa8.44□□□□□ -1.06
KRR1-203ENST00000550023 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
KRR1-203ENST00000550023 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
KRR1-203ENST00000550023 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
KRR1-203ENST00000550023 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
KRR1-203ENST00000550023 NUTM2FA1L443 756 aa8.42□□□□□ -1.06
KRR1-203ENST00000550023 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
KRR1-203ENST00000550023 KANK3Q6NY19 840 aa8.42□□□□□ -1.06
KRR1-203ENST00000550023 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
KRR1-203ENST00000550023 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
KRR1-203ENST00000550023 MRPL14Q6P1L8 145 aaKnown RBP8.41□□□□□ -1.06
KRR1-203ENST00000550023 ERICH3Q5RHP9 1530 aa8.4□□□□□ -1.06
KRR1-203ENST00000550023 CEP162Q5TB80 1403 aa8.4□□□□□ -1.06
KRR1-203ENST00000550023 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
KRR1-203ENST00000550023 DAXXQ9UER7 740 aaPredicted RBP8.4□□□□□ -1.06
KRR1-203ENST00000550023 CFTRP13569 1480 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 SIAH2O43255 324 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 ADAM23O75077 832 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
KRR1-203ENST00000550023 GCGRP47871 477 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 SVOPQ8N4V2 548 aa8.39□□□□□ -1.07
KRR1-203ENST00000550023 MAN1A2O60476 641 aa8.38□□□□□ -1.07
KRR1-203ENST00000550023 FCHSD2O94868 740 aa8.38□□□□□ -1.07
KRR1-203ENST00000550023 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
KRR1-203ENST00000550023 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms