RNA–Protein interactions for RNA: ENST00000549413.1

PMEL-210, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 461 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-210ENST00000549413 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
PMEL-210ENST00000549413 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
PMEL-210ENST00000549413 FOXD1Q16676 465 aa10.42□□□□□ -0.74
PMEL-210ENST00000549413 DHX57Q6P158 1386 aaKnown RBP10.41□□□□□ -0.74
PMEL-210ENST00000549413 RGL3Q3MIN7 710 aa10.41□□□□□ -0.74
PMEL-210ENST00000549413 C1orf167Q5SNV9 1468 aa10.41□□□□□ -0.74
PMEL-210ENST00000549413 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
PMEL-210ENST00000549413 PNPLA6Q8IY17 1366 aa10.4□□□□□ -0.74
PMEL-210ENST00000549413 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
PMEL-210ENST00000549413 NEXMIFQ5QGS0 1516 aa10.4□□□□□ -0.74
PMEL-210ENST00000549413 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
PMEL-210ENST00000549413 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
PMEL-210ENST00000549413 NRXN3Q9Y4C0 1643 aa10.4□□□□□ -0.75
PMEL-210ENST00000549413 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
PMEL-210ENST00000549413 SPHKAPQ2M3C7 1700 aa10.39□□□□□ -0.75
PMEL-210ENST00000549413 XRN1Q8IZH2 1706 aaKnown RBP10.39□□□□□ -0.75
PMEL-210ENST00000549413 STK26Q9P289 416 aa10.39□□□□□ -0.75
PMEL-210ENST00000549413 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
PMEL-210ENST00000549413 CLTCL1P53675 1640 aa10.39□□□□□ -0.75
PMEL-210ENST00000549413 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
PMEL-210ENST00000549413 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
PMEL-210ENST00000549413 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
PMEL-210ENST00000549413 USP21Q9UK80 565 aa10.38□□□□□ -0.75
PMEL-210ENST00000549413 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
PMEL-210ENST00000549413 FOXO3O43524 673 aa10.37□□□□□ -0.75
PMEL-210ENST00000549413 WAPLQ7Z5K2 1190 aa10.37□□□□□ -0.75
PMEL-210ENST00000549413 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
PMEL-210ENST00000549413 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
PMEL-210ENST00000549413 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
PMEL-210ENST00000549413 TMEM132EQ6IEE7 984 aa10.36□□□□□ -0.75
PMEL-210ENST00000549413 CCDC144AA2RUR9 1427 aa10.35□□□□□ -0.75
PMEL-210ENST00000549413 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
PMEL-210ENST00000549413 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
PMEL-210ENST00000549413 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
PMEL-210ENST00000549413 ANKRD30BQ9BXX2 1392 aa10.35□□□□□ -0.75
PMEL-210ENST00000549413 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
PMEL-210ENST00000549413 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
PMEL-210ENST00000549413 FKBP8Q14318 412 aa10.33□□□□□ -0.76
PMEL-210ENST00000549413 ABCC11Q96J66 1382 aa10.33□□□□□ -0.76
PMEL-210ENST00000549413 SETD1AO15047 1707 aaKnown RBP10.33□□□□□ -0.76
PMEL-210ENST00000549413 SIRT1Q96EB6 747 aa10.32□□□□□ -0.76
PMEL-210ENST00000549413 KIF1BO60333 1816 aa10.32□□□□□ -0.76
PMEL-210ENST00000549413 NHSL1Q5SYE7 1610 aa10.32□□□□□ -0.76
PMEL-210ENST00000549413 RGS12O14924 1447 aa10.32□□□□□ -0.76
PMEL-210ENST00000549413 ATAD2Q6PL18 1390 aa10.3□□□□□ -0.76
PMEL-210ENST00000549413 KRT28Q7Z3Y7 464 aa10.3□□□□□ -0.76
PMEL-210ENST00000549413 C14orf93Q9H972 538 aaKnown RBP10.3□□□□□ -0.76
PMEL-210ENST00000549413 SPATA31E1Q6ZUB1 1445 aa10.3□□□□□ -0.76
PMEL-210ENST00000549413 NALCNQ8IZF0 1738 aa10.3□□□□□ -0.76
PMEL-210ENST00000549413 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
PMEL-210ENST00000549413 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
PMEL-210ENST00000549413 PSME1Q06323 249 aa10.29□□□□□ -0.76
PMEL-210ENST00000549413 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
PMEL-210ENST00000549413 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
PMEL-210ENST00000549413 TECPR2O15040 1411 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 UNC5CLQ8IV45 518 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 POGKQ9P215 609 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
PMEL-210ENST00000549413 ATRNO75882 1429 aa10.27□□□□□ -0.77
PMEL-210ENST00000549413 YTHDC2Q9H6S0 1430 aaKnown RBP10.27□□□□□ -0.77
PMEL-210ENST00000549413 SAFB2Q14151 953 aaKnown RBP eCLIP10.27□□□□□ -0.77
PMEL-210ENST00000549413 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
PMEL-210ENST00000549413 PRAM1Q96QH2 718 aa10.27□□□□□ -0.77
PMEL-210ENST00000549413 MYOM2P54296 1465 aa10.27□□□□□ -0.77
PMEL-210ENST00000549413 LAMC1P11047 1609 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 PIK3C2GO75747 1445 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 BCL9LQ86UU0 1499 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 PXDNQ92626 1479 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 ZRANB1Q9UGI0 708 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
PMEL-210ENST00000549413 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
PMEL-210ENST00000549413 PPLO60437 1756 aa10.24□□□□□ -0.77
PMEL-210ENST00000549413 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
PMEL-210ENST00000549413 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
PMEL-210ENST00000549413 MSH5O43196 834 aa10.23□□□□□ -0.77
PMEL-210ENST00000549413 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
PMEL-210ENST00000549413 TRAK1Q9UPV9 953 aa10.23□□□□□ -0.77
PMEL-210ENST00000549413 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
PMEL-210ENST00000549413 ANP32CO43423 234 aa10.22□□□□□ -0.77
PMEL-210ENST00000549413 DEKP35659 375 aaKnown RBP10.22□□□□□ -0.77
PMEL-210ENST00000549413 VPS72Q15906 364 aa10.22□□□□□ -0.77
PMEL-210ENST00000549413 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
PMEL-210ENST00000549413 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
PMEL-210ENST00000549413 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
PMEL-210ENST00000549413 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
PMEL-210ENST00000549413 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.77
PMEL-210ENST00000549413 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
PMEL-210ENST00000549413 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.77
PMEL-210ENST00000549413 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
PMEL-210ENST00000549413 ARHGEF10O15013 1369 aa10.2□□□□□ -0.78
PMEL-210ENST00000549413 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
PMEL-210ENST00000549413 SLIT2O94813 1529 aa10.2□□□□□ -0.78
PMEL-210ENST00000549413 TNS3Q68CZ2 1445 aa10.2□□□□□ -0.78
PMEL-210ENST00000549413 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
PMEL-210ENST00000549413 SRCAPQ6ZRS2 3230 aa10.2□□□□□ -0.78
PMEL-210ENST00000549413 RALGAPBQ86X10 1494 aa10.19□□□□□ -0.78
PMEL-210ENST00000549413 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
PMEL-210ENST00000549413 GPRASP1Q5JY77 1395 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms