RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
LETMD1-219ENST00000549395 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
LETMD1-219ENST00000549395 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
LETMD1-219ENST00000549395 IQGAP3Q86VI3 1631 aa11.85□□□□□ -0.51
LETMD1-219ENST00000549395 ADGRL2O95490 1459 aa11.84□□□□□ -0.51
LETMD1-219ENST00000549395 BAG6P46379 1132 aa11.84□□□□□ -0.51
LETMD1-219ENST00000549395 SLIT2O94813 1529 aa11.83□□□□□ -0.52
LETMD1-219ENST00000549395 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-219ENST00000549395 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
LETMD1-219ENST00000549395 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
LETMD1-219ENST00000549395 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
LETMD1-219ENST00000549395 PXDNQ92626 1479 aa11.82□□□□□ -0.52
LETMD1-219ENST00000549395 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-219ENST00000549395 ZNF326Q5BKZ1 582 aaKnown RBP11.81□□□□□ -0.52
LETMD1-219ENST00000549395 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
LETMD1-219ENST00000549395 ROBO2Q9HCK4 1378 aa11.79□□□□□ -0.52
LETMD1-219ENST00000549395 FOXO3O43524 673 aa11.79□□□□□ -0.52
LETMD1-219ENST00000549395 ONECUT3O60422 494 aaPredicted RBP11.79□□□□□ -0.52
LETMD1-219ENST00000549395 CCDC9Q9Y3X0 531 aaKnown RBP11.79□□□□□ -0.52
LETMD1-219ENST00000549395 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
LETMD1-219ENST00000549395 RGPD1P0DJD0 1748 aa11.78□□□□□ -0.52
LETMD1-219ENST00000549395 VPS72Q15906 364 aa11.78□□□□□ -0.52
LETMD1-219ENST00000549395 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
LETMD1-219ENST00000549395 A0A0G2JS52 829 aa11.77□□□□□ -0.53
LETMD1-219ENST00000549395 MYT1Q01538 1121 aa11.77□□□□□ -0.53
LETMD1-219ENST00000549395 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
LETMD1-219ENST00000549395 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
LETMD1-219ENST00000549395 NWD2Q9ULI1 1742 aa11.76□□□□□ -0.53
LETMD1-219ENST00000549395 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
LETMD1-219ENST00000549395 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
LETMD1-219ENST00000549395 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
LETMD1-219ENST00000549395 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
LETMD1-219ENST00000549395 EZH2Q15910 746 aaKnown RBP11.74□□□□□ -0.53
LETMD1-219ENST00000549395 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
LETMD1-219ENST00000549395 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
LETMD1-219ENST00000549395 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
LETMD1-219ENST00000549395 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
LETMD1-219ENST00000549395 SPATA31A3Q5VYP0 1347 aa11.73□□□□□ -0.53
LETMD1-219ENST00000549395 HFM1A2PYH4 1435 aa11.72□□□□□ -0.53
LETMD1-219ENST00000549395 NUP155O75694 1391 aa11.72□□□□□ -0.53
LETMD1-219ENST00000549395 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
LETMD1-219ENST00000549395 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
LETMD1-219ENST00000549395 CLTCL1P53675 1640 aa11.71□□□□□ -0.54
LETMD1-219ENST00000549395 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 PRAG1Q86YV5 1406 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 KIF1BO60333 1816 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 ABCA3Q99758 1704 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 APLP2Q06481 763 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
LETMD1-219ENST00000549395 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
LETMD1-219ENST00000549395 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
LETMD1-219ENST00000549395 CAMKK2Q96RR4 588 aa11.68□□□□□ -0.54
LETMD1-219ENST00000549395 PPP1R1BQ9UD71 204 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-219ENST00000549395 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
LETMD1-219ENST00000549395 CCDC144AA2RUR9 1427 aa11.68□□□□□ -0.54
LETMD1-219ENST00000549395 NAIPQ13075 1403 aa11.68□□□□□ -0.54
LETMD1-219ENST00000549395 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
LETMD1-219ENST00000549395 RGPD8O14715 1765 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-219ENST00000549395 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
LETMD1-219ENST00000549395 RREB1Q92766 1687 aa11.66□□□□□ -0.54
LETMD1-219ENST00000549395 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-219ENST00000549395 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-219ENST00000549395 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
LETMD1-219ENST00000549395 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
LETMD1-219ENST00000549395 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
LETMD1-219ENST00000549395 TRIM37O94972 964 aa11.65□□□□□ -0.54
LETMD1-219ENST00000549395 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
LETMD1-219ENST00000549395 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
LETMD1-219ENST00000549395 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 APBA3O96018 575 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 SPON1Q9HCB6 807 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 THSD7AQ9UPZ6 1657 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 NINLQ9Y2I6 1382 aa11.64□□□□□ -0.55
LETMD1-219ENST00000549395 KCNQ2O43526 872 aa11.63□□□□□ -0.55
LETMD1-219ENST00000549395 PPLO60437 1756 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 PSME1Q06323 249 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 NBPF8Q3BBV2 869 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 STK26Q9P289 416 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 PARD3Q8TEW0 1356 aa11.62□□□□□ -0.55
LETMD1-219ENST00000549395 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
LETMD1-219ENST00000549395 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
LETMD1-219ENST00000549395 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
LETMD1-219ENST00000549395 PLEKHH1Q9ULM0 1364 aa11.6□□□□□ -0.55
LETMD1-219ENST00000549395 FAM196AQ6ZSG2 479 aa11.6□□□□□ -0.55
LETMD1-219ENST00000549395 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
LETMD1-219ENST00000549395 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
LETMD1-219ENST00000549395 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
LETMD1-219ENST00000549395 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
LETMD1-219ENST00000549395 CHD4Q14839 1912 aa11.59□□□□□ -0.55
LETMD1-219ENST00000549395 RPGRIP1LQ68CZ1 1315 aa11.58□□□□□ -0.56
LETMD1-219ENST00000549395 UTRNP46939 3433 aa11.57□□□□□ -0.56
LETMD1-219ENST00000549395 TECPR2O15040 1411 aa11.57□□□□□ -0.56
LETMD1-219ENST00000549395 KNDC1Q76NI1 1749 aa11.57□□□□□ -0.56
LETMD1-219ENST00000549395 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms