RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
SLC38A1-206ENST00000549049 PLXNC1O60486 1568 aa15.76■□□□□ 0.11
SLC38A1-206ENST00000549049 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
SLC38A1-206ENST00000549049 TBC1D2Q9BYX2 928 aa15.76■□□□□ 0.11
SLC38A1-206ENST00000549049 CHD1O14646 1710 aa15.76■□□□□ 0.11
SLC38A1-206ENST00000549049 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
SLC38A1-206ENST00000549049 ZKSCAN2Q63HK3 967 aa15.75■□□□□ 0.11
SLC38A1-206ENST00000549049 MYH16Q9H6N6 1097 aa15.75■□□□□ 0.11
SLC38A1-206ENST00000549049 FANCAO15360 1455 aa15.75■□□□□ 0.11
SLC38A1-206ENST00000549049 SYNMO15061 1565 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 LAMC1P11047 1609 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 PTPRTO14522 1441 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 ABCC1P33527 1531 aa15.74■□□□□ 0.11
SLC38A1-206ENST00000549049 POLR3AO14802 1390 aaPredicted RBP15.73■□□□□ 0.11
SLC38A1-206ENST00000549049 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
SLC38A1-206ENST00000549049 TRPM2O94759 1503 aa15.73■□□□□ 0.11
SLC38A1-206ENST00000549049 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
SLC38A1-206ENST00000549049 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
SLC38A1-206ENST00000549049 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
SLC38A1-206ENST00000549049 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
SLC38A1-206ENST00000549049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■■□ 22.6
SLC38A1-206ENST00000549049 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
SLC38A1-206ENST00000549049 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 WDR63Q8IWG1 891 aa15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 C14orf93Q9H972 538 aaKnown RBP15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 RNF17Q9BXT8 1623 aaKnown RBP15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 TRIM27P14373 513 aa15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 RIPK4P57078 832 aa15.71■□□□□ 0.11
SLC38A1-206ENST00000549049 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.1
SLC38A1-206ENST00000549049 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.1
SLC38A1-206ENST00000549049 IQGAP1P46940 1657 aa15.7■□□□□ 0.1
SLC38A1-206ENST00000549049 C1orf115Q9H7X2 142 aa15.7■□□□□ 0.1
SLC38A1-206ENST00000549049 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
SLC38A1-206ENST00000549049 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
SLC38A1-206ENST00000549049 C22orf23Q9BZE7 217 aa15.69■□□□□ 0.1
SLC38A1-206ENST00000549049 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
SLC38A1-206ENST00000549049 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
SLC38A1-206ENST00000549049 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
SLC38A1-206ENST00000549049 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
SLC38A1-206ENST00000549049 KDM5AP29375 1690 aaKnown RBP15.68■□□□□ 0.1
SLC38A1-206ENST00000549049 HMOX1P09601 288 aa15.68■□□□□ 0.1
SLC38A1-206ENST00000549049 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
SLC38A1-206ENST00000549049 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
SLC38A1-206ENST00000549049 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
SLC38A1-206ENST00000549049 MYOM1P52179 1685 aa15.66■□□□□ 0.1
SLC38A1-206ENST00000549049 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
SLC38A1-206ENST00000549049 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
SLC38A1-206ENST00000549049 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
SLC38A1-206ENST00000549049 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
SLC38A1-206ENST00000549049 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
SLC38A1-206ENST00000549049 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
SLC38A1-206ENST00000549049 IDI1Q13907 227 aa15.64■□□□□ 0.09
SLC38A1-206ENST00000549049 TRIM35Q9UPQ4 493 aa15.64■□□□□ 0.09
SLC38A1-206ENST00000549049 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
SLC38A1-206ENST00000549049 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
SLC38A1-206ENST00000549049 ANTXR1Q9H6X2 564 aa15.63■□□□□ 0.09
SLC38A1-206ENST00000549049 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
SLC38A1-206ENST00000549049 CLASP1Q7Z460 1538 aa15.62■□□□□ 0.09
SLC38A1-206ENST00000549049 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
SLC38A1-206ENST00000549049 CABP1Q9NZU7 370 aa15.62■□□□□ 0.09
SLC38A1-206ENST00000549049 DDX19BQ9UMR2 479 aa15.62■□□□□ 0.09
SLC38A1-206ENST00000549049 APBB1O00213 710 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 FYB1O15117 783 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 NINLQ9Y2I6 1382 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 MCM4P33991 863 aa15.61■□□□□ 0.09
SLC38A1-206ENST00000549049 MAP3K4Q9Y6R4 1608 aa15.6■□□□□ 0.09
SLC38A1-206ENST00000549049 CEP152O94986 1710 aa15.6■□□□□ 0.09
SLC38A1-206ENST00000549049 NPATQ14207 1427 aa15.6■□□□□ 0.09
SLC38A1-206ENST00000549049 GOLGA6L3A6NEY3 463 aa15.59■□□□□ 0.09
SLC38A1-206ENST00000549049 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
SLC38A1-206ENST00000549049 RRAGDQ9NQL2 400 aaPredicted RBP15.59■□□□□ 0.09
SLC38A1-206ENST00000549049 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 TET3O43151 1660 aa15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 TRAK2O60296 914 aa15.58■□□□□ 0.08
SLC38A1-206ENST00000549049 SOX12O15370 315 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 WAPLQ7Z5K2 1190 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 TERF2IPQ9NYB0 399 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 ZNF518AQ6AHZ1 1483 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 XRCC6P12956 609 aaKnown RBP eCLIP15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 MLECQ14165 292 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 PLEKHF1Q96S99 279 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
SLC38A1-206ENST00000549049 ANKRD36BQ8N2N9 1353 aa15.56■□□□□ 0.08
SLC38A1-206ENST00000549049 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
SLC38A1-206ENST00000549049 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
SLC38A1-206ENST00000549049 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
SLC38A1-206ENST00000549049 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
SLC38A1-206ENST00000549049 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms