RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
CNOT2-216ENST00000548939 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
CNOT2-216ENST00000548939 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
CNOT2-216ENST00000548939 HLA-CQ95604 372 aa10.83□□□□□ -0.68
CNOT2-216ENST00000548939 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
CNOT2-216ENST00000548939 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
CNOT2-216ENST00000548939 HOXA2O43364 376 aa10.82□□□□□ -0.68
CNOT2-216ENST00000548939 MYT1Q01538 1121 aa10.82□□□□□ -0.68
CNOT2-216ENST00000548939 MMP16P51512 607 aa10.8□□□□□ -0.68
CNOT2-216ENST00000548939 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
CNOT2-216ENST00000548939 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
CNOT2-216ENST00000548939 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
CNOT2-216ENST00000548939 ZMYND10O75800 440 aa10.77□□□□□ -0.69
CNOT2-216ENST00000548939 DXOO77932 396 aaKnown RBP10.77□□□□□ -0.69
CNOT2-216ENST00000548939 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
CNOT2-216ENST00000548939 CYP4X1Q8N118 509 aa10.76□□□□□ -0.69
CNOT2-216ENST00000548939 ZC3H15Q8WU90 426 aaKnown RBP10.76□□□□□ -0.69
CNOT2-216ENST00000548939 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
CNOT2-216ENST00000548939 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
CNOT2-216ENST00000548939 TOR4AQ9NXH8 423 aa10.75□□□□□ -0.69
CNOT2-216ENST00000548939 TRIM32Q13049 653 aa10.74□□□□□ -0.69
CNOT2-216ENST00000548939 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
CNOT2-216ENST00000548939 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
CNOT2-216ENST00000548939 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
CNOT2-216ENST00000548939 FDX1P10109 184 aa10.71□□□□□ -0.69
CNOT2-216ENST00000548939 JUNDP17535 347 aa10.71□□□□□ -0.69
CNOT2-216ENST00000548939 AMHR2Q16671 573 aa10.71□□□□□ -0.69
CNOT2-216ENST00000548939 AAASQ9NRG9 546 aa10.71□□□□□ -0.69
CNOT2-216ENST00000548939 TTC24A2A3L6 582 aaPredicted RBP10.7□□□□□ -0.7
CNOT2-216ENST00000548939 WNT7AO00755 349 aa10.7□□□□□ -0.7
CNOT2-216ENST00000548939 RETREG3Q86VR2 466 aa10.7□□□□□ -0.7
CNOT2-216ENST00000548939 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
CNOT2-216ENST00000548939 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
CNOT2-216ENST00000548939 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
CNOT2-216ENST00000548939 PCDHGC3Q9UN70 934 aa10.68□□□□□ -0.7
CNOT2-216ENST00000548939 POTECB2RU33 542 aa10.67□□□□□ -0.7
CNOT2-216ENST00000548939 AVPP01185 164 aa10.66□□□□□ -0.7
CNOT2-216ENST00000548939 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
CNOT2-216ENST00000548939 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
CNOT2-216ENST00000548939 MRGPRX2Q96LB1 330 aa10.66□□□□□ -0.7
CNOT2-216ENST00000548939 NDUFV2P19404 249 aa10.65□□□□□ -0.7
CNOT2-216ENST00000548939 ZNF775Q96BV0 537 aaPredicted RBP10.65□□□□□ -0.7
CNOT2-216ENST00000548939 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
CNOT2-216ENST00000548939 MOXD2PA6NHM9 499 aa10.64□□□□□ -0.71
CNOT2-216ENST00000548939 AXIN1O15169 862 aa10.64□□□□□ -0.71
CNOT2-216ENST00000548939 CTC1Q2NKJ3 1217 aa10.64□□□□□ -0.71
CNOT2-216ENST00000548939 BEGAINQ9BUH8 593 aa10.64□□□□□ -0.71
CNOT2-216ENST00000548939 WNT7BP56706 349 aa10.63□□□□□ -0.71
CNOT2-216ENST00000548939 TRIM66O15016 1216 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 MS4A1P11836 297 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 SMPD1P17405 629 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 SKOR1P84550 965 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
CNOT2-216ENST00000548939 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 AK7Q96M32 723 aa10.62□□□□□ -0.71
CNOT2-216ENST00000548939 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
CNOT2-216ENST00000548939 J3QL48 77 aa10.6□□□□□ -0.71
CNOT2-216ENST00000548939 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
CNOT2-216ENST00000548939 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
CNOT2-216ENST00000548939 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
CNOT2-216ENST00000548939 MTMR2Q13614 643 aa10.59□□□□□ -0.71
CNOT2-216ENST00000548939 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
CNOT2-216ENST00000548939 DIXDC1Q155Q3 683 aa10.58□□□□□ -0.72
CNOT2-216ENST00000548939 PRR7Q8TB68 274 aa10.58□□□□□ -0.72
CNOT2-216ENST00000548939 SPDYE5A6NIY4 337 aa10.57□□□□□ -0.72
CNOT2-216ENST00000548939 PTPRNQ16849 979 aa10.57□□□□□ -0.72
CNOT2-216ENST00000548939 GJA5P36382 358 aa10.56□□□□□ -0.72
CNOT2-216ENST00000548939 GMPR2Q9P2T1 348 aaKnown RBP10.56□□□□□ -0.72
CNOT2-216ENST00000548939 RSBN1LQ6PCB5 846 aaPredicted RBP10.55□□□□□ -0.72
CNOT2-216ENST00000548939 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
CNOT2-216ENST00000548939 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
CNOT2-216ENST00000548939 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
CNOT2-216ENST00000548939 HPS1Q92902 700 aa10.54□□□□□ -0.72
CNOT2-216ENST00000548939 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
CNOT2-216ENST00000548939 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
CNOT2-216ENST00000548939 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
CNOT2-216ENST00000548939 SPTLC1O15269 473 aa10.52□□□□□ -0.73
CNOT2-216ENST00000548939 SH3BP2P78314 561 aa10.52□□□□□ -0.73
CNOT2-216ENST00000548939 KCNH2Q12809 1159 aa10.52□□□□□ -0.73
CNOT2-216ENST00000548939 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
CNOT2-216ENST00000548939 PDE4DQ08499 809 aa10.51□□□□□ -0.73
CNOT2-216ENST00000548939 SIAH2O43255 324 aa10.5□□□□□ -0.73
CNOT2-216ENST00000548939 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
CNOT2-216ENST00000548939 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
CNOT2-216ENST00000548939 ATP13A2Q9NQ11 1180 aa10.5□□□□□ -0.73
CNOT2-216ENST00000548939 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
CNOT2-216ENST00000548939 BAP1Q92560 729 aa10.49□□□□□ -0.73
CNOT2-216ENST00000548939 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
CNOT2-216ENST00000548939 HRCP23327 699 aa10.48□□□□□ -0.73
CNOT2-216ENST00000548939 WASF2Q9Y6W5 498 aa10.48□□□□□ -0.73
CNOT2-216ENST00000548939 CFAP99D6REC4 459 aa10.47□□□□□ -0.73
CNOT2-216ENST00000548939 CTHP32929 405 aa10.47□□□□□ -0.73
CNOT2-216ENST00000548939 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
CNOT2-216ENST00000548939 PRPF38BQ5VTL8 546 aaKnown RBP10.47□□□□□ -0.73
CNOT2-216ENST00000548939 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
CNOT2-216ENST00000548939 ZNF511Q8NB15 262 aa10.46□□□□□ -0.73
CNOT2-216ENST00000548939 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.73
CNOT2-216ENST00000548939 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
CNOT2-216ENST00000548939 SENP2Q9HC62 589 aa10.45□□□□□ -0.74
CNOT2-216ENST00000548939 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms