RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM43AQ8N2R8 423 aa17.64■□□□□ 0.41
HDAC7-228ENST00000548938 RICTORQ6R327 1708 aa17.64■□□□□ 0.41
HDAC7-228ENST00000548938 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
HDAC7-228ENST00000548938 CLTCL1P53675 1640 aa17.63■□□□□ 0.41
HDAC7-228ENST00000548938 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
HDAC7-228ENST00000548938 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
HDAC7-228ENST00000548938 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
HDAC7-228ENST00000548938 BECN1Q14457 450 aa17.63■□□□□ 0.41
HDAC7-228ENST00000548938 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
HDAC7-228ENST00000548938 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
HDAC7-228ENST00000548938 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
HDAC7-228ENST00000548938 PPRC1Q5VV67 1664 aaKnown RBP17.61■□□□□ 0.41
HDAC7-228ENST00000548938 CEP152O94986 1710 aa17.6■□□□□ 0.41
HDAC7-228ENST00000548938 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
HDAC7-228ENST00000548938 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
HDAC7-228ENST00000548938 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
HDAC7-228ENST00000548938 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
HDAC7-228ENST00000548938 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.41
HDAC7-228ENST00000548938 NPATQ14207 1427 aa17.57■□□□□ 0.4
HDAC7-228ENST00000548938 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
HDAC7-228ENST00000548938 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
HDAC7-228ENST00000548938 TSPOAP1O95153 1857 aa17.57■□□□□ 0.4
HDAC7-228ENST00000548938 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
HDAC7-228ENST00000548938 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
HDAC7-228ENST00000548938 RLBP1P12271 317 aa17.56■□□□□ 0.4
HDAC7-228ENST00000548938 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
HDAC7-228ENST00000548938 ABCC3O15438 1527 aa17.55■□□□□ 0.4
HDAC7-228ENST00000548938 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
HDAC7-228ENST00000548938 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
HDAC7-228ENST00000548938 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
HDAC7-228ENST00000548938 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
HDAC7-228ENST00000548938 TBC1D2Q9BYX2 928 aa17.54■□□□□ 0.4
HDAC7-228ENST00000548938 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
HDAC7-228ENST00000548938 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-228ENST00000548938 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
HDAC7-228ENST00000548938 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
HDAC7-228ENST00000548938 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
HDAC7-228ENST00000548938 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
HDAC7-228ENST00000548938 RRAGDQ9NQL2 400 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-228ENST00000548938 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
HDAC7-228ENST00000548938 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.39
HDAC7-228ENST00000548938 UBE2Q2Q8WVN8 375 aa17.52■□□□□ 0.39
HDAC7-228ENST00000548938 ARXQ96QS3 562 aa17.51■□□□□ 0.39
HDAC7-228ENST00000548938 SHPRHQ149N8 1683 aa17.51■□□□□ 0.39
HDAC7-228ENST00000548938 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
HDAC7-228ENST00000548938 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-228ENST00000548938 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
HDAC7-228ENST00000548938 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
HDAC7-228ENST00000548938 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
HDAC7-228ENST00000548938 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
HDAC7-228ENST00000548938 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
HDAC7-228ENST00000548938 ZMYM3Q14202 1370 aa17.49■□□□□ 0.39
HDAC7-228ENST00000548938 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
HDAC7-228ENST00000548938 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
HDAC7-228ENST00000548938 AAMPQ13685 434 aa17.47■□□□□ 0.39
HDAC7-228ENST00000548938 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
HDAC7-228ENST00000548938 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-228ENST00000548938 KIF1BO60333 1816 aa17.47■□□□□ 0.39
HDAC7-228ENST00000548938 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
HDAC7-228ENST00000548938 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
HDAC7-228ENST00000548938 MORC1Q86VD1 984 aa17.46■□□□□ 0.39
HDAC7-228ENST00000548938 NOS1P29475 1434 aa17.46■□□□□ 0.39
HDAC7-228ENST00000548938 RWDD1Q9H446 243 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-228ENST00000548938 MROH2AA6NES4 1674 aa17.45■□□□□ 0.38
HDAC7-228ENST00000548938 MYOM2P54296 1465 aa17.45■□□□□ 0.38
HDAC7-228ENST00000548938 ADGRB3O60242 1522 aa17.45■□□□□ 0.38
HDAC7-228ENST00000548938 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
HDAC7-228ENST00000548938 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.386e-6■■■■■ 31.4
HDAC7-228ENST00000548938 MCM4P33991 863 aa17.44■□□□□ 0.38
HDAC7-228ENST00000548938 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-228ENST00000548938 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
HDAC7-228ENST00000548938 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
HDAC7-228ENST00000548938 GOLGA6L3A6NEY3 463 aa17.42■□□□□ 0.38
HDAC7-228ENST00000548938 FSD2A1L4K1 749 aa17.42■□□□□ 0.38
HDAC7-228ENST00000548938 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
HDAC7-228ENST00000548938 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
HDAC7-228ENST00000548938 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
HDAC7-228ENST00000548938 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
HDAC7-228ENST00000548938 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
HDAC7-228ENST00000548938 ZC3H13Q5T200 1668 aaKnown RBP17.41■□□□□ 0.38
HDAC7-228ENST00000548938 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
HDAC7-228ENST00000548938 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
HDAC7-228ENST00000548938 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
HDAC7-228ENST00000548938 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
HDAC7-228ENST00000548938 MTHFSP49914 203 aa17.39■□□□□ 0.37
HDAC7-228ENST00000548938 REREQ9P2R6 1566 aa17.39■□□□□ 0.37
HDAC7-228ENST00000548938 IDI1Q13907 227 aa17.38■□□□□ 0.37
HDAC7-228ENST00000548938 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
HDAC7-228ENST00000548938 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
HDAC7-228ENST00000548938 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
HDAC7-228ENST00000548938 AGLP35573 1532 aa17.38■□□□□ 0.37
HDAC7-228ENST00000548938 PIK3C2BO00750 1634 aa17.38■□□□□ 0.37
HDAC7-228ENST00000548938 ZKSCAN2Q63HK3 967 aa17.37■□□□□ 0.37
HDAC7-228ENST00000548938 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
HDAC7-228ENST00000548938 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
HDAC7-228ENST00000548938 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
HDAC7-228ENST00000548938 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
HDAC7-228ENST00000548938 TRAK2O60296 914 aa17.36■□□□□ 0.37
HDAC7-228ENST00000548938 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
HDAC7-228ENST00000548938 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms