RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
TROAP-208ENST00000548817 METP08581 1390 aa13.09□□□□□ -0.31
TROAP-208ENST00000548817 SLIT2O94813 1529 aa13.09□□□□□ -0.31
TROAP-208ENST00000548817 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
TROAP-208ENST00000548817 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
TROAP-208ENST00000548817 YY1P25490 414 aa13.08□□□□□ -0.32
TROAP-208ENST00000548817 BAG6P46379 1132 aa13.08□□□□□ -0.32
TROAP-208ENST00000548817 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
TROAP-208ENST00000548817 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
TROAP-208ENST00000548817 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
TROAP-208ENST00000548817 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
TROAP-208ENST00000548817 PXDNQ92626 1479 aa13.06□□□□□ -0.32
TROAP-208ENST00000548817 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
TROAP-208ENST00000548817 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
TROAP-208ENST00000548817 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
TROAP-208ENST00000548817 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
TROAP-208ENST00000548817 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
TROAP-208ENST00000548817 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
TROAP-208ENST00000548817 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
TROAP-208ENST00000548817 VPS72Q15906 364 aa13.02□□□□□ -0.33
TROAP-208ENST00000548817 HFM1A2PYH4 1435 aa13.02□□□□□ -0.33
TROAP-208ENST00000548817 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
TROAP-208ENST00000548817 USP32Q8NFA0 1604 aa13.02□□□□□ -0.33
TROAP-208ENST00000548817 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
TROAP-208ENST00000548817 NEXMIFQ5QGS0 1516 aa12.99□□□□□ -0.33
TROAP-208ENST00000548817 R3HDM1Q15032 1099 aaKnown RBP12.99□□□□□ -0.33
TROAP-208ENST00000548817 ZNF326Q5BKZ1 582 aaKnown RBP12.98□□□□□ -0.33
TROAP-208ENST00000548817 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
TROAP-208ENST00000548817 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
TROAP-208ENST00000548817 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
TROAP-208ENST00000548817 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.33
TROAP-208ENST00000548817 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
TROAP-208ENST00000548817 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.34
TROAP-208ENST00000548817 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
TROAP-208ENST00000548817 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
TROAP-208ENST00000548817 FOXO3O43524 673 aa12.95□□□□□ -0.34
TROAP-208ENST00000548817 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
TROAP-208ENST00000548817 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
TROAP-208ENST00000548817 TNS1Q9HBL0 1735 aaKnown RBP12.94□□□□□ -0.34
TROAP-208ENST00000548817 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
TROAP-208ENST00000548817 NUP155O75694 1391 aa12.93□□□□□ -0.34
TROAP-208ENST00000548817 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
TROAP-208ENST00000548817 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
TROAP-208ENST00000548817 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
TROAP-208ENST00000548817 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
TROAP-208ENST00000548817 ITGAEP38570 1179 aa12.91□□□□□ -0.34
TROAP-208ENST00000548817 A0A0G2JS52 829 aa12.9□□□□□ -0.34
TROAP-208ENST00000548817 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
TROAP-208ENST00000548817 MYT1Q01538 1121 aa12.9□□□□□ -0.34
TROAP-208ENST00000548817 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
TROAP-208ENST00000548817 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
TROAP-208ENST00000548817 KIF1BO60333 1816 aa12.9□□□□□ -0.34
TROAP-208ENST00000548817 NAIPQ13075 1403 aa12.89□□□□□ -0.35
TROAP-208ENST00000548817 TNS3Q68CZ2 1445 aa12.89□□□□□ -0.35
TROAP-208ENST00000548817 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
TROAP-208ENST00000548817 RREB1Q92766 1687 aa12.87□□□□□ -0.35
TROAP-208ENST00000548817 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
TROAP-208ENST00000548817 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
TROAP-208ENST00000548817 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
TROAP-208ENST00000548817 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
TROAP-208ENST00000548817 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
TROAP-208ENST00000548817 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 PSME1Q06323 249 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
TROAP-208ENST00000548817 TECPR2O15040 1411 aa12.86□□□□□ -0.35
TROAP-208ENST00000548817 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
TROAP-208ENST00000548817 RPGRIP1LQ68CZ1 1315 aa12.85□□□□□ -0.35
TROAP-208ENST00000548817 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
TROAP-208ENST00000548817 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
TROAP-208ENST00000548817 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
TROAP-208ENST00000548817 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
TROAP-208ENST00000548817 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
TROAP-208ENST00000548817 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
TROAP-208ENST00000548817 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
TROAP-208ENST00000548817 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 KCNQ2O43526 872 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 PPARGC1BQ86YN6 1023 aaKnown RBP12.82□□□□□ -0.36
TROAP-208ENST00000548817 CABLES1Q8TDN4 633 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 KNDC1Q76NI1 1749 aa12.82□□□□□ -0.36
TROAP-208ENST00000548817 PPLO60437 1756 aa12.81□□□□□ -0.36
TROAP-208ENST00000548817 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
TROAP-208ENST00000548817 C1QTNF8P60827 252 aa12.8□□□□□ -0.36
TROAP-208ENST00000548817 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
TROAP-208ENST00000548817 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
TROAP-208ENST00000548817 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
TROAP-208ENST00000548817 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
TROAP-208ENST00000548817 TRIM37O94972 964 aa12.79□□□□□ -0.36
TROAP-208ENST00000548817 APBA3O96018 575 aa12.79□□□□□ -0.36
TROAP-208ENST00000548817 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
TROAP-208ENST00000548817 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
TROAP-208ENST00000548817 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
TROAP-208ENST00000548817 CHD4Q14839 1912 aa12.77□□□□□ -0.37
TROAP-208ENST00000548817 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
TROAP-208ENST00000548817 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
TROAP-208ENST00000548817 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms