RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 PREX1Q8TCU6 1659 aa11.13□□□□□ -0.63
CDK17-204ENST00000548422 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
CDK17-204ENST00000548422 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
CDK17-204ENST00000548422 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
CDK17-204ENST00000548422 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
CDK17-204ENST00000548422 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
CDK17-204ENST00000548422 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
CDK17-204ENST00000548422 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
CDK17-204ENST00000548422 PDIA6Q15084 440 aa11.11□□□□□ -0.63
CDK17-204ENST00000548422 ABCA8O94911 1581 aa11.11□□□□□ -0.63
CDK17-204ENST00000548422 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
CDK17-204ENST00000548422 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
CDK17-204ENST00000548422 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
CDK17-204ENST00000548422 NAP1L5Q96NT1 182 aaPredicted RBP11.1□□□□□ -0.63
CDK17-204ENST00000548422 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
CDK17-204ENST00000548422 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
CDK17-204ENST00000548422 EEA1Q15075 1411 aa11.08□□□□□ -0.64
CDK17-204ENST00000548422 UHRF1BP1Q6BDS2 1440 aa11.08□□□□□ -0.64
CDK17-204ENST00000548422 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
CDK17-204ENST00000548422 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
CDK17-204ENST00000548422 CCER2I3L3R5 266 aa11.07□□□□□ -0.64
CDK17-204ENST00000548422 NBR1Q14596 966 aa11.07□□□□□ -0.64
CDK17-204ENST00000548422 PDCL3Q9H2J4 239 aa11.07□□□□□ -0.64
CDK17-204ENST00000548422 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
CDK17-204ENST00000548422 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
CDK17-204ENST00000548422 MAGI2Q86UL8 1455 aa11.06□□□□□ -0.64
CDK17-204ENST00000548422 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
CDK17-204ENST00000548422 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
CDK17-204ENST00000548422 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
CDK17-204ENST00000548422 NEFMP07197 916 aa11.05□□□□□ -0.64
CDK17-204ENST00000548422 PRDM4Q9UKN5 801 aa11.05□□□□□ -0.64
CDK17-204ENST00000548422 LTBP4Q8N2S1 1624 aa11.05□□□□□ -0.64
CDK17-204ENST00000548422 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
CDK17-204ENST00000548422 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
CDK17-204ENST00000548422 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
CDK17-204ENST00000548422 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
CDK17-204ENST00000548422 DDX12PQ92771 950 aa11.04□□□□□ -0.64
CDK17-204ENST00000548422 NAP1L2Q9ULW6 460 aaPredicted RBP11.04□□□□□ -0.64
CDK17-204ENST00000548422 GRXCR2A6NFK2 248 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 UBAP1LF5GYI3 381 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 SEMA3EO15041 775 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 ARID3AQ99856 593 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 RICTORQ6R327 1708 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 ZMYM4Q5VZL5 1548 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 ZFYVE16Q7Z3T8 1539 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 CFAP74Q9C0B2 1584 aa11.03□□□□□ -0.64
CDK17-204ENST00000548422 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDK17-204ENST00000548422 MLECQ14165 292 aa11.02□□□□□ -0.65
CDK17-204ENST00000548422 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
CDK17-204ENST00000548422 BCANQ96GW7 911 aa11.02□□□□□ -0.65
CDK17-204ENST00000548422 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
CDK17-204ENST00000548422 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
CDK17-204ENST00000548422 ATP10BO94823 1461 aa11□□□□□ -0.65
CDK17-204ENST00000548422 ARHGEF12Q9NZN5 1544 aa11□□□□□ -0.65
CDK17-204ENST00000548422 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
CDK17-204ENST00000548422 PHF14O94880 888 aa11□□□□□ -0.65
CDK17-204ENST00000548422 TEX2Q8IWB9 1127 aa11□□□□□ -0.65
CDK17-204ENST00000548422 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
CDK17-204ENST00000548422 FOSBP53539 338 aa10.99□□□□□ -0.65
CDK17-204ENST00000548422 SMYD5Q6GMV2 418 aa10.99□□□□□ -0.65
CDK17-204ENST00000548422 TPM2P07951 284 aa10.98□□□□□ -0.65
CDK17-204ENST00000548422 EPAS1Q99814 870 aa10.98□□□□□ -0.65
CDK17-204ENST00000548422 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
CDK17-204ENST00000548422 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
CDK17-204ENST00000548422 MLLT3P42568 568 aaPredicted RBP10.97□□□□□ -0.65
CDK17-204ENST00000548422 TYW1BQ6NUM6 668 aa10.97□□□□□ -0.65
CDK17-204ENST00000548422 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
CDK17-204ENST00000548422 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
CDK17-204ENST00000548422 ANP32BQ92688 251 aaKnown RBP10.96□□□□□ -0.65
CDK17-204ENST00000548422 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
CDK17-204ENST00000548422 CHMP4AQ9BY43 222 aa10.96□□□□□ -0.65
CDK17-204ENST00000548422 ATP10AO60312 1499 aa10.95□□□□□ -0.66
CDK17-204ENST00000548422 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
CDK17-204ENST00000548422 C9orf84Q5VXU9 1444 aa10.95□□□□□ -0.66
CDK17-204ENST00000548422 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
CDK17-204ENST00000548422 CEBPAP49715 358 aaPredicted RBP10.95□□□□□ -0.66
CDK17-204ENST00000548422 UTP14CQ5TAP6 766 aaKnown RBP10.95□□□□□ -0.66
CDK17-204ENST00000548422 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
CDK17-204ENST00000548422 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
CDK17-204ENST00000548422 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
CDK17-204ENST00000548422 CLCN1P35523 988 aa10.94□□□□□ -0.66
CDK17-204ENST00000548422 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
CDK17-204ENST00000548422 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
CDK17-204ENST00000548422 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
CDK17-204ENST00000548422 BRPF3Q9ULD4 1205 aa10.94□□□□□ -0.66
CDK17-204ENST00000548422 SIGLEC1Q9BZZ2 1709 aa10.93□□□□□ -0.66
CDK17-204ENST00000548422 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
CDK17-204ENST00000548422 TOM1O60784 492 aa10.92□□□□□ -0.66
CDK17-204ENST00000548422 TERF1P54274 439 aa10.92□□□□□ -0.66
CDK17-204ENST00000548422 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
CDK17-204ENST00000548422 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
CDK17-204ENST00000548422 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
CDK17-204ENST00000548422 PLEKHD1A6NEE1 506 aa10.91□□□□□ -0.66
CDK17-204ENST00000548422 MAP3K7O43318 606 aa10.91□□□□□ -0.66
CDK17-204ENST00000548422 OSBPP22059 807 aa10.91□□□□□ -0.66
CDK17-204ENST00000548422 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
CDK17-204ENST00000548422 HSPA1LP34931 641 aa10.91□□□□□ -0.66
CDK17-204ENST00000548422 L1TD1Q5T7N2 865 aaKnown RBP10.91□□□□□ -0.66
CDK17-204ENST00000548422 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms