RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
TMEM116-205ENST00000547878 TMEM131LA2VDJ0 1609 aa11.92□□□□□ -0.5
TMEM116-205ENST00000547878 DDX17Q92841 729 aaKnown RBP11.91□□□□□ -0.5
TMEM116-205ENST00000547878 MPHOSPH9Q99550 1183 aa11.91□□□□□ -0.5
TMEM116-205ENST00000547878 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
TMEM116-205ENST00000547878 PTPRUQ92729 1446 aa11.91□□□□□ -0.5
TMEM116-205ENST00000547878 NHSL1Q5SYE7 1610 aa11.91□□□□□ -0.5
TMEM116-205ENST00000547878 NEFLP07196 543 aa11.9□□□□□ -0.5
TMEM116-205ENST00000547878 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-205ENST00000547878 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM116-205ENST00000547878 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
TMEM116-205ENST00000547878 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
TMEM116-205ENST00000547878 PNPLA6Q8IY17 1366 aa11.88□□□□□ -0.51
TMEM116-205ENST00000547878 MST1RQ04912 1400 aa11.88□□□□□ -0.51
TMEM116-205ENST00000547878 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
TMEM116-205ENST00000547878 FKBP8Q14318 412 aa11.88□□□□□ -0.51
TMEM116-205ENST00000547878 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
TMEM116-205ENST00000547878 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
TMEM116-205ENST00000547878 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
TMEM116-205ENST00000547878 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
TMEM116-205ENST00000547878 ADAMTS2O95450 1211 aa11.86□□□□□ -0.51
TMEM116-205ENST00000547878 PIK3R4Q99570 1358 aa11.86□□□□□ -0.51
TMEM116-205ENST00000547878 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
TMEM116-205ENST00000547878 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
TMEM116-205ENST00000547878 DCCP43146 1447 aa11.85□□□□□ -0.51
TMEM116-205ENST00000547878 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
TMEM116-205ENST00000547878 DEKP35659 375 aaKnown RBP11.85□□□□□ -0.51
TMEM116-205ENST00000547878 L3MBTL2Q969R5 705 aa11.85□□□□□ -0.51
TMEM116-205ENST00000547878 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
TMEM116-205ENST00000547878 TRPM2O94759 1503 aa11.85□□□□□ -0.51
TMEM116-205ENST00000547878 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
TMEM116-205ENST00000547878 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
TMEM116-205ENST00000547878 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
TMEM116-205ENST00000547878 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.83□□□□□ -0.52
TMEM116-205ENST00000547878 UNC13BO14795 1591 aa11.83□□□□□ -0.52
TMEM116-205ENST00000547878 NRXN3Q9Y4C0 1643 aa11.82□□□□□ -0.52
TMEM116-205ENST00000547878 USP21Q9UK80 565 aa11.82□□□□□ -0.52
TMEM116-205ENST00000547878 ATRNO75882 1429 aa11.8□□□□□ -0.52
TMEM116-205ENST00000547878 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-205ENST00000547878 RBM19Q9Y4C8 960 aaKnown RBP11.8□□□□□ -0.52
TMEM116-205ENST00000547878 NALCNQ8IZF0 1738 aa11.79□□□□□ -0.52
TMEM116-205ENST00000547878 E9PCH4 1651 aa11.79□□□□□ -0.52
TMEM116-205ENST00000547878 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-205ENST00000547878 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-205ENST00000547878 METP08581 1390 aa11.79□□□□□ -0.52
TMEM116-205ENST00000547878 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
TMEM116-205ENST00000547878 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
TMEM116-205ENST00000547878 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
TMEM116-205ENST00000547878 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
TMEM116-205ENST00000547878 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.52
TMEM116-205ENST00000547878 LAMC1P11047 1609 aa11.77□□□□□ -0.52
TMEM116-205ENST00000547878 ZBED9Q6R2W3 1325 aa11.77□□□□□ -0.53
TMEM116-205ENST00000547878 C1orf167Q5SNV9 1468 aa11.77□□□□□ -0.53
TMEM116-205ENST00000547878 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.53
TMEM116-205ENST00000547878 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
TMEM116-205ENST00000547878 KIF7Q2M1P5 1343 aa11.76□□□□□ -0.53
TMEM116-205ENST00000547878 ORAI2Q96SN7 254 aa11.76□□□□□ -0.53
TMEM116-205ENST00000547878 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-205ENST00000547878 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
TMEM116-205ENST00000547878 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
TMEM116-205ENST00000547878 C11orf95C9JLR9 678 aaPredicted RBP11.74□□□□□ -0.53
TMEM116-205ENST00000547878 DEFB132Q7Z7B7 95 aa11.74□□□□□ -0.53
TMEM116-205ENST00000547878 CCDC125Q86Z20 511 aa11.74□□□□□ -0.53
TMEM116-205ENST00000547878 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
TMEM116-205ENST00000547878 LRP5O75197 1615 aa11.73□□□□□ -0.53
TMEM116-205ENST00000547878 COL22A1Q8NFW1 1626 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-205ENST00000547878 MYOM2P54296 1465 aa11.73□□□□□ -0.53
TMEM116-205ENST00000547878 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
TMEM116-205ENST00000547878 MSH5O43196 834 aa11.72□□□□□ -0.53
TMEM116-205ENST00000547878 USP47Q96K76 1375 aa11.72□□□□□ -0.53
TMEM116-205ENST00000547878 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-205ENST00000547878 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
TMEM116-205ENST00000547878 GLI3P10071 1580 aa11.71□□□□□ -0.53
TMEM116-205ENST00000547878 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
TMEM116-205ENST00000547878 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
TMEM116-205ENST00000547878 BRWD3Q6RI45 1802 aa11.69□□□□□ -0.54
TMEM116-205ENST00000547878 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
TMEM116-205ENST00000547878 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
TMEM116-205ENST00000547878 MRS2Q9HD23 443 aa11.69□□□□□ -0.54
TMEM116-205ENST00000547878 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
TMEM116-205ENST00000547878 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-205ENST00000547878 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-205ENST00000547878 CCDC184Q52MB2 194 aa11.67□□□□□ -0.54
TMEM116-205ENST00000547878 NEXMIFQ5QGS0 1516 aa11.67□□□□□ -0.54
TMEM116-205ENST00000547878 PXDNQ92626 1479 aa11.67□□□□□ -0.54
TMEM116-205ENST00000547878 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
TMEM116-205ENST00000547878 ZNF326Q5BKZ1 582 aaKnown RBP11.66□□□□□ -0.54
TMEM116-205ENST00000547878 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
TMEM116-205ENST00000547878 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
TMEM116-205ENST00000547878 SLIT2O94813 1529 aa11.65□□□□□ -0.54
TMEM116-205ENST00000547878 NUP155O75694 1391 aa11.64□□□□□ -0.55
TMEM116-205ENST00000547878 SPHKAPQ2M3C7 1700 aa11.64□□□□□ -0.55
TMEM116-205ENST00000547878 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
TMEM116-205ENST00000547878 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
TMEM116-205ENST00000547878 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
TMEM116-205ENST00000547878 FOXO3O43524 673 aa11.63□□□□□ -0.55
TMEM116-205ENST00000547878 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
TMEM116-205ENST00000547878 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
TMEM116-205ENST00000547878 CLTCL1P53675 1640 aa11.62□□□□□ -0.55
TMEM116-205ENST00000547878 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms