RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 MAGI3Q5TCQ9 1506 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 MROH2AA6NES4 1674 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 ANKK1Q8NFD2 765 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 ARAP3Q8WWN8 1544 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 PDZD2O15018 2839 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 NECTIN2Q92692 538 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 RANBP2P49792 3224 aaKnown RBP0.93□□□□□ -2.26
CEP290-203ENST00000547691 KIF21BO75037 1637 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 ARHGAP33O14559 1287 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 NBPF3Q9H094 633 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 GRIN2AQ12879 1464 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 CUL7Q14999 1698 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 RICTORQ6R327 1708 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 ARHGEF40Q8TER5 1519 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 TTC13Q8NBP0 860 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 AAASQ9NRG9 546 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 PKD2L1Q9P0L9 805 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 ZCCHC11Q5TAX3 1644 aaKnown RBP0.92□□□□□ -2.26
CEP290-203ENST00000547691 SENP2Q9HC62 589 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 FOXD4L1Q9NU39 408 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 HYDINQ4G0P3 5121 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 ABCA9Q8IUA7 1624 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 ALKQ9UM73 1620 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 MED1Q15648 1581 aaPredicted RBP0.92□□□□□ -2.26
CEP290-203ENST00000547691 LAMC2Q13753 1193 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 LRP5O75197 1615 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 ABCC2Q92887 1545 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 ARHGEF15O94989 841 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 PPP4R3BQ5MIZ7 849 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 KDM2AQ9Y2K7 1162 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 BOLA1Q9Y3E2 137 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 CFAP74Q9C0B2 1584 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 TBC1D12O60347 775 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 IRF7Q92985 503 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 CUX1P39880 1505 aa0.92□□□□□ -2.26
CEP290-203ENST00000547691 TEX14Q8IWB6 1497 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 MADDQ8WXG6 1647 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 MSTNO14793 375 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 SLC4A3P48751 1232 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 HDGFP51858 240 aaKnown RBP0.91□□□□□ -2.26
CEP290-203ENST00000547691 ARSIQ5FYB1 569 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 COL17A1Q9UMD9 1497 aaPredicted RBP0.91□□□□□ -2.26
CEP290-203ENST00000547691 ARHGEF12Q9NZN5 1544 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 SYNMO15061 1565 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 KIAA0556O60303 1618 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 K7ELQ4 463 aaPredicted RBP0.91□□□□□ -2.26
CEP290-203ENST00000547691 GOLGA2P5Q9HBQ8 144 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 TOR4AQ9NXH8 423 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 PTPRTO14522 1441 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 PKHD1L1Q86WI1 4243 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 PTPRMP28827 1452 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 PLB1Q6P1J6 1458 aa0.91□□□□□ -2.26
CEP290-203ENST00000547691 NYAP1Q6ZVC0 841 aa0.9□□□□□ -2.26
CEP290-203ENST00000547691 KIFC2Q96AC6 838 aa0.9□□□□□ -2.26
CEP290-203ENST00000547691 AXIN2Q9Y2T1 843 aa0.9□□□□□ -2.26
CEP290-203ENST00000547691 RIMS1Q86UR5 1692 aaKnown RBP0.9□□□□□ -2.26
CEP290-203ENST00000547691 POLR1AO95602 1720 aaPredicted RBP0.9□□□□□ -2.26
CEP290-203ENST00000547691 PODNQ7Z5L7 613 aa0.9□□□□□ -2.26
CEP290-203ENST00000547691 TSPOAP1O95153 1857 aa0.9□□□□□ -2.26
CEP290-203ENST00000547691 AQRO60306 1485 aaKnown RBP eCLIP0.9□□□□□ -2.27
CEP290-203ENST00000547691 FGD5Q6ZNL6 1462 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.27
CEP290-203ENST00000547691 KRTAP5-8O75690 187 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 RASSF7Q02833 373 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 ABCA8O94911 1581 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 COL7A1Q02388 2944 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 AXIN1O15169 862 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 KDM5CP41229 1560 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 SETD1AO15047 1707 aaKnown RBP0.9□□□□□ -2.27
CEP290-203ENST00000547691 FAM135AQ9P2D6 1515 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 FHAD1B1AJZ9 1412 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 ADAM23O75077 832 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 SLURP2P0DP57 97 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 UGGT2Q9NYU1 1516 aa0.9□□□□□ -2.27
CEP290-203ENST00000547691 C3P01024 1663 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 CCDC88BA6NC98 1476 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 XIRP1Q702N8 1843 aaKnown RBP0.89□□□□□ -2.27
CEP290-203ENST00000547691 PHLDB1Q86UU1 1377 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 CELSR3Q9NYQ7 3312 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 PHF20L1A8MW92 1017 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 TERTO14746 1132 aaKnown RBP0.89□□□□□ -2.27
CEP290-203ENST00000547691 SCARF2Q96GP6 870 aaPredicted RBP0.89□□□□□ -2.27
CEP290-203ENST00000547691 DEPDC5O75140 1603 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 KIF14Q15058 1648 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 CTTNBP2Q8WZ74 1663 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 RNF17Q9BXT8 1623 aaKnown RBP0.89□□□□□ -2.27
CEP290-203ENST00000547691 KANK3Q6NY19 840 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 TRIM52Q96A61 297 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 TAOK2Q9UL54 1235 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 LAMC1P11047 1609 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 NHSL1Q5SYE7 1610 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 MAP3K10Q02779 954 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 ZNF467Q7Z7K2 595 aaPredicted RBP0.89□□□□□ -2.27
CEP290-203ENST00000547691 PSPNO60542 156 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 IRS1P35568 1242 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 CYP4X1Q8N118 509 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 KCNK17Q96T54 332 aa0.89□□□□□ -2.27
CEP290-203ENST00000547691 DNMT3AQ9Y6K1 912 aaPredicted RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms